RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 FCN2Q15485 313 aa17.41■□□□□ 0.38
LIMD2-207ENST00000579329 IGFL4Q6B9Z1 124 aa17.41■□□□□ 0.38
LIMD2-207ENST00000579329 CSNK1G2-AS1Q8NCQ2 148 aa17.41■□□□□ 0.38
LIMD2-207ENST00000579329 ATP5SQ99766 215 aa17.41■□□□□ 0.38
LIMD2-207ENST00000579329 WDR61Q9GZS3 305 aaKnown RBP17.41■□□□□ 0.38
LIMD2-207ENST00000579329 KCNIP2Q9NS61 270 aa17.41■□□□□ 0.38
LIMD2-207ENST00000579329 XCL2Q9UBD3 114 aa17.41■□□□□ 0.38
LIMD2-207ENST00000579329 LCE6AA0A183 80 aa17.4■□□□□ 0.38
LIMD2-207ENST00000579329 FAM78BQ5VT40 261 aa17.4■□□□□ 0.38
LIMD2-207ENST00000579329 LCN15Q6UWW0 184 aa17.4■□□□□ 0.38
LIMD2-207ENST00000579329 RNF182Q8N6D2 247 aa17.4■□□□□ 0.38
LIMD2-207ENST00000579329 OR11H7Q8NGC8 314 aa17.4■□□□□ 0.38
LIMD2-207ENST00000579329 ZNF705EA8MWA4 302 aaPredicted RBP17.39■□□□□ 0.37
LIMD2-207ENST00000579329 ZNF709Q8N972 641 aa17.39■□□□□ 0.37
LIMD2-207ENST00000579329 ZNF738Q8NE65 137 aa17.39■□□□□ 0.37
LIMD2-207ENST00000579329 SLC50A1Q9BRV3 221 aa17.39■□□□□ 0.37
LIMD2-207ENST00000579329 PSG9Q00887 426 aa17.38■□□□□ 0.37
LIMD2-207ENST00000579329 TRAV5A0A0B4J249 113 aa17.37■□□□□ 0.37
LIMD2-207ENST00000579329 A8MTW9 85 aa17.37■□□□□ 0.37
LIMD2-207ENST00000579329 C17orf112F2Z3M2 114 aa17.37■□□□□ 0.37
LIMD2-207ENST00000579329 DUSP14O95147 198 aaKnown RBP17.37■□□□□ 0.37
LIMD2-207ENST00000579329 MIFP14174 115 aa17.37■□□□□ 0.37
LIMD2-207ENST00000579329 FXYD7P58549 80 aa17.37■□□□□ 0.37
LIMD2-207ENST00000579329 PSG3Q16557 428 aa17.37■□□□□ 0.37
LIMD2-207ENST00000579329 Q8NAQ8 132 aa17.37■□□□□ 0.37
LIMD2-207ENST00000579329 X6R8D5 127 aa17.37■□□□□ 0.37
LIMD2-207ENST00000579329 IGLC2P0DOY2 106 aa17.36■□□□□ 0.37
LIMD2-207ENST00000579329 HLA-DMBP28068 263 aa17.36■□□□□ 0.37
LIMD2-207ENST00000579329 SMIM3Q9BZL3 60 aa17.36■□□□□ 0.37
LIMD2-207ENST00000579329 SLC35B3Q9H1N7 401 aa17.36■□□□□ 0.37
LIMD2-207ENST00000579329 HRH4Q9H3N8 390 aa17.36■□□□□ 0.37
LIMD2-207ENST00000579329 ZNF331Q9NQX6 463 aaPredicted RBP17.36■□□□□ 0.37
LIMD2-207ENST00000579329 HYDINQ4G0P3 5121 aa17.35■□□□□ 0.37
LIMD2-207ENST00000579329 IGHV4-28A0A0C4DH34 117 aa17.35■□□□□ 0.37
LIMD2-207ENST00000579329 CXorf65A6NEN9 183 aa17.35■□□□□ 0.37
LIMD2-207ENST00000579329 IFNA5P01569 189 aa17.35■□□□□ 0.37
LIMD2-207ENST00000579329 SNRPCP09234 159 aaKnown RBP17.35■□□□□ 0.37
LIMD2-207ENST00000579329 CNN1P51911 297 aaKnown RBP17.35■□□□□ 0.37
LIMD2-207ENST00000579329 PMS2P11Q13670 270 aa17.35■□□□□ 0.37
LIMD2-207ENST00000579329 OXA1LQ15070 435 aa17.35■□□□□ 0.37
LIMD2-207ENST00000579329 GUK1Q16774 197 aa17.35■□□□□ 0.37
LIMD2-207ENST00000579329 GCSAMLQ5JQS6 135 aa17.35■□□□□ 0.37
LIMD2-207ENST00000579329 ASB13Q8WXK3 278 aa17.35■□□□□ 0.37
LIMD2-207ENST00000579329 MFFQ9GZY8 342 aa17.35■□□□□ 0.37
LIMD2-207ENST00000579329 DEFB4AO15263 64 aa17.34■□□□□ 0.37
LIMD2-207ENST00000579329 GIPP09681 153 aaPredicted RBP17.34■□□□□ 0.37
LIMD2-207ENST00000579329 H3BQ15 152 aa17.33■□□□□ 0.36
LIMD2-207ENST00000579329 H3BTX0 84 aa17.33■□□□□ 0.36
LIMD2-207ENST00000579329 AMTNQ6UX39 209 aa17.33■□□□□ 0.36
LIMD2-207ENST00000579329 SCGB1C1Q8TD33 95 aa17.33■□□□□ 0.36
LIMD2-207ENST00000579329 TMEM14CQ9P0S9 112 aa17.33■□□□□ 0.36
LIMD2-207ENST00000579329 SLC17A3O00476 420 aa17.32■□□□□ 0.36
LIMD2-207ENST00000579329 ZNF705DP0CH99 300 aaPredicted RBP17.32■□□□□ 0.36
LIMD2-207ENST00000579329 ZNF705BP0CI00 300 aaPredicted RBP17.32■□□□□ 0.36
LIMD2-207ENST00000579329 ZNF705AQ6ZN79 300 aaPredicted RBP17.32■□□□□ 0.36
LIMD2-207ENST00000579329 OR8A1Q8NGG7 326 aa17.32■□□□□ 0.36
LIMD2-207ENST00000579329 C11orf45Q8TAV5 145 aa17.32■□□□□ 0.36
LIMD2-207ENST00000579329 RPUSD4Q96CM3 377 aaKnown RBP17.32■□□□□ 0.36
LIMD2-207ENST00000579329 SAT2Q96F10 170 aaPredicted RBP17.32■□□□□ 0.36
LIMD2-207ENST00000579329 PARD6GQ9BYG4 376 aaPredicted RBP17.32■□□□□ 0.36
LIMD2-207ENST00000579329 NUPR2A6NF83 97 aa17.31■□□□□ 0.36
LIMD2-207ENST00000579329 AMBPP02760 352 aa17.31■□□□□ 0.36
LIMD2-207ENST00000579329 RBMY1A1P0DJD3 496 aaKnown RBP17.31■□□□□ 0.36
LIMD2-207ENST00000579329 RBMY1CP0DJD4 496 aa17.31■□□□□ 0.36
LIMD2-207ENST00000579329 HIST1H1AQ02539 215 aaPredicted RBP17.31■□□□□ 0.36
LIMD2-207ENST00000579329 RBMY1FQ15415 496 aaKnown RBP17.31■□□□□ 0.36
LIMD2-207ENST00000579329 MRPL32Q9BYC8 188 aaKnown RBP17.31■□□□□ 0.36
LIMD2-207ENST00000579329 ZNF586Q9NXT0 402 aa17.31■□□□□ 0.36
LIMD2-207ENST00000579329 ZNF253O75346 499 aa17.3■□□□□ 0.36
LIMD2-207ENST00000579329 NEU1Q99519 415 aa17.3■□□□□ 0.36
LIMD2-207ENST00000579329 WFDC1Q9HC57 220 aa17.3■□□□□ 0.36
LIMD2-207ENST00000579329 GOLT1BQ9Y3E0 138 aa17.3■□□□□ 0.36
LIMD2-207ENST00000579329 ZNF705FA8MVS1 300 aaPredicted RBP17.29■□□□□ 0.36
LIMD2-207ENST00000579329 HIST1H1EP10412 219 aaKnown RBP17.29■□□□□ 0.36
LIMD2-207ENST00000579329 MIR17HGQ75NE6 70 aa17.29■□□□□ 0.36
LIMD2-207ENST00000579329 AQP10Q96PS8 301 aa17.29■□□□□ 0.36
LIMD2-207ENST00000579329 SLC25A2Q9BXI2 301 aa17.29■□□□□ 0.36
LIMD2-207ENST00000579329 IGHV3OR16-12A0A075B7B8 117 aa17.28■□□□□ 0.36
LIMD2-207ENST00000579329 NANOS2P60321 138 aaKnown RBP17.28■□□□□ 0.36
LIMD2-207ENST00000579329 RHOBP62745 196 aa17.28■□□□□ 0.36
LIMD2-207ENST00000579329 FFAR4Q5NUL3 377 aa17.28■□□□□ 0.36
LIMD2-207ENST00000579329 CEMP1Q6PRD7 247 aaPredicted RBP17.28■□□□□ 0.36
LIMD2-207ENST00000579329 IGF2BP2-AS1Q96M15 143 aa17.28■□□□□ 0.36
LIMD2-207ENST00000579329 TRBV19A0A075B6N1 114 aa17.27■□□□□ 0.36
LIMD2-207ENST00000579329 SMIM9A6NGZ8 99 aa17.27■□□□□ 0.36
LIMD2-207ENST00000579329 BOLA2-SMG1P6H3BVE0 249 aa17.27■□□□□ 0.36
LIMD2-207ENST00000579329 PYYP10082 97 aa17.27■□□□□ 0.36
LIMD2-207ENST00000579329 SPINK13Q1W4C9 94 aa17.27■□□□□ 0.36
LIMD2-207ENST00000579329 FAM167A-AS1Q96KT0 104 aa17.27■□□□□ 0.36
LIMD2-207ENST00000579329 PPP1R14DQ9NXH3 145 aa17.27■□□□□ 0.36
LIMD2-207ENST00000579329 FUT9Q9Y231 359 aa17.27■□□□□ 0.36
LIMD2-207ENST00000579329 M0R2Z0 102 aa17.26■□□□□ 0.35
LIMD2-207ENST00000579329 PDE6HQ13956 83 aa17.26■□□□□ 0.35
LIMD2-207ENST00000579329 Q5BKY6 102 aa17.26■□□□□ 0.35
LIMD2-207ENST00000579329 C1orf158Q8N1D5 194 aa17.26■□□□□ 0.35
LIMD2-207ENST00000579329 PHLDA1Q8WV24 401 aaPredicted RBP17.26■□□□□ 0.35
LIMD2-207ENST00000579329 TIMM9Q9Y5J7 89 aa17.26■□□□□ 0.35
LIMD2-207ENST00000579329 INSP01308 110 aa17.25■□□□□ 0.35
LIMD2-207ENST00000579329 PRB4P10163 310 aaPredicted RBP17.25■□□□□ 0.35
LIMD2-207ENST00000579329 ZNF266Q14584 549 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms