RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 OR1L4Q8NGR5 311 aa10.72□□□□□ -0.69
SS18-212ENST00000579061 PFDN5Q99471 154 aa10.72□□□□□ -0.69
SS18-212ENST00000579061 SLC25A31Q9H0C2 315 aa10.72□□□□□ -0.69
SS18-212ENST00000579061 DNAJC4Q9NNZ3 241 aa10.72□□□□□ -0.69
SS18-212ENST00000579061 UBE2L5PA0A1B0GUS4 154 aa10.71□□□□□ -0.69
SS18-212ENST00000579061 C11orf94C9JXX5 98 aa10.71□□□□□ -0.69
SS18-212ENST00000579061 AMBPP02760 352 aa10.71□□□□□ -0.69
SS18-212ENST00000579061 CXCL3P19876 107 aa10.71□□□□□ -0.69
SS18-212ENST00000579061 FXYD7P58549 80 aa10.71□□□□□ -0.69
SS18-212ENST00000579061 BAXQ07812 192 aa10.71□□□□□ -0.69
SS18-212ENST00000579061 MIC13Q5XKP0 118 aa10.71□□□□□ -0.69
SS18-212ENST00000579061 IGFL4Q6B9Z1 124 aa10.71□□□□□ -0.69
SS18-212ENST00000579061 AMTNQ6UX39 209 aa10.71□□□□□ -0.69
SS18-212ENST00000579061 LINC00476Q8WZB0 136 aa10.71□□□□□ -0.69
SS18-212ENST00000579061 SLC50A1Q9BRV3 221 aa10.71□□□□□ -0.69
SS18-212ENST00000579061 SLC35B3Q9H1N7 401 aa10.71□□□□□ -0.69
SS18-212ENST00000579061 SLC39A9Q9NUM3 307 aa10.71□□□□□ -0.69
SS18-212ENST00000579061 TMEM189A5PLL7 270 aa10.7□□□□□ -0.7
SS18-212ENST00000579061 CNN1P51911 297 aaKnown RBP10.7□□□□□ -0.7
SS18-212ENST00000579061 H2BFSP57053 126 aa10.7□□□□□ -0.7
SS18-212ENST00000579061 TCTAP57738 103 aa10.7□□□□□ -0.7
SS18-212ENST00000579061 B2MP61769 119 aa10.7□□□□□ -0.7
SS18-212ENST00000579061 PSG3Q16557 428 aa10.7□□□□□ -0.7
SS18-212ENST00000579061 RNF182Q8N6D2 247 aa10.7□□□□□ -0.7
SS18-212ENST00000579061 ZNF738Q8NE65 137 aa10.7□□□□□ -0.7
SS18-212ENST00000579061 LRRC20Q8TCA0 184 aa10.7□□□□□ -0.7
SS18-212ENST00000579061 GOLT1BQ9Y3E0 138 aa10.7□□□□□ -0.7
SS18-212ENST00000579061 H0YIZ8 118 aa10.69□□□□□ -0.7
SS18-212ENST00000579061 SSNA1O43805 119 aa10.69□□□□□ -0.7
SS18-212ENST00000579061 FGF7P21781 194 aa10.69□□□□□ -0.7
SS18-212ENST00000579061 NHLH2Q02577 135 aa10.69□□□□□ -0.7
SS18-212ENST00000579061 LRRC37A5PQ49AS3 106 aa10.69□□□□□ -0.7
SS18-212ENST00000579061 OR11H7Q8NGC8 314 aa10.69□□□□□ -0.7
SS18-212ENST00000579061 OR5C1Q8NGR4 320 aa10.69□□□□□ -0.7
SS18-212ENST00000579061 PPP1R1CQ8WVI7 109 aa10.69□□□□□ -0.7
SS18-212ENST00000579061 ZNF331Q9NQX6 463 aaPredicted RBP10.69□□□□□ -0.7
SS18-212ENST00000579061 OR5AC2Q9NZP5 309 aa10.69□□□□□ -0.7
SS18-212ENST00000579061 PXMP4Q9Y6I8 212 aa10.69□□□□□ -0.7
SS18-212ENST00000579061 PET100P0DJ07 73 aa10.68□□□□□ -0.7
SS18-212ENST00000579061 IGLC2P0DOY2 106 aa10.68□□□□□ -0.7
SS18-212ENST00000579061 HLA-DMBP28068 263 aa10.68□□□□□ -0.7
SS18-212ENST00000579061 MORN5Q5VZ52 161 aa10.68□□□□□ -0.7
SS18-212ENST00000579061 OR8A1Q8NGG7 326 aa10.68□□□□□ -0.7
SS18-212ENST00000579061 C2CD4CQ8TF44 421 aa10.68□□□□□ -0.7
SS18-212ENST00000579061 IGF2BP2-AS1Q96M15 143 aa10.68□□□□□ -0.7
SS18-212ENST00000579061 NPCDR1Q9BY65 106 aa10.68□□□□□ -0.7
SS18-212ENST00000579061 RFNGQ9Y644 331 aa10.68□□□□□ -0.7
SS18-212ENST00000579061 TRAV10A0A0B4J240 114 aa10.67□□□□□ -0.7
SS18-212ENST00000579061 MPC2O95563 127 aa10.67□□□□□ -0.7
SS18-212ENST00000579061 GUK1Q16774 197 aa10.67□□□□□ -0.7
SS18-212ENST00000579061 C1orf158Q8N1D5 194 aa10.67□□□□□ -0.7
SS18-212ENST00000579061 IGHV3OR16-12A0A075B7B8 117 aa10.66□□□□□ -0.7
SS18-212ENST00000579061 TEX48A0A1B0GUV7 120 aa10.66□□□□□ -0.7
SS18-212ENST00000579061 ZNF253O75346 499 aa10.66□□□□□ -0.7
SS18-212ENST00000579061 HBE1P02100 147 aa10.66□□□□□ -0.7
SS18-212ENST00000579061 HIST1H1AQ02539 215 aaPredicted RBP10.66□□□□□ -0.7
SS18-212ENST00000579061 RPUSD4Q96CM3 377 aaKnown RBP10.66□□□□□ -0.7
SS18-212ENST00000579061 SAT2Q96F10 170 aaPredicted RBP10.66□□□□□ -0.7
SS18-212ENST00000579061 RNF126Q9BV68 326 aa10.66□□□□□ -0.7
SS18-212ENST00000579061 KCNIP2Q9NS61 270 aa10.66□□□□□ -0.7
SS18-212ENST00000579061 CELA1Q9UNI1 258 aa10.66□□□□□ -0.7
SS18-212ENST00000579061 TRAV5A0A0B4J249 113 aa10.65□□□□□ -0.7
SS18-212ENST00000579061 H3BQ15 152 aa10.65□□□□□ -0.7
SS18-212ENST00000579061 BOLA2-SMG1P6H3BVE0 249 aa10.65□□□□□ -0.7
SS18-212ENST00000579061 CRXO43186 299 aaPredicted RBP10.65□□□□□ -0.7
SS18-212ENST00000579061 LY6G6CO95867 125 aa10.65□□□□□ -0.7
SS18-212ENST00000579061 PTTG1O95997 202 aa10.65□□□□□ -0.7
SS18-212ENST00000579061 INSP01308 110 aa10.65□□□□□ -0.7
SS18-212ENST00000579061 SPINK13Q1W4C9 94 aa10.65□□□□□ -0.7
SS18-212ENST00000579061 C12orf74Q32Q52 190 aa10.65□□□□□ -0.7
SS18-212ENST00000579061 LGALS9CQ6DKI2 356 aa10.65□□□□□ -0.7
SS18-212ENST00000579061 Q6ZTC4 211 aa10.65□□□□□ -0.7
SS18-212ENST00000579061 TMEM14CQ9P0S9 112 aa10.65□□□□□ -0.7
SS18-212ENST00000579061 HYDINQ4G0P3 5121 aa10.65□□□□□ -0.71
SS18-212ENST00000579061 M0R2Z0 102 aa10.64□□□□□ -0.71
SS18-212ENST00000579061 SLC17A3O00476 420 aa10.64□□□□□ -0.71
SS18-212ENST00000579061 SPART-AS1P0CW21 52 aa10.64□□□□□ -0.71
SS18-212ENST00000579061 CLINT1Q14677 625 aa10.64□□□□□ -0.71
SS18-212ENST00000579061 RRN3P1Q2M238 152 aa10.64□□□□□ -0.71
SS18-212ENST00000579061 THAP6Q8TBB0 222 aa10.64□□□□□ -0.71
SS18-212ENST00000579061 TMEM208Q9BTX3 173 aa10.64□□□□□ -0.71
SS18-212ENST00000579061 WDR61Q9GZS3 305 aaKnown RBP10.64□□□□□ -0.71
SS18-212ENST00000579061 PPP1R14DQ9NXH3 145 aa10.64□□□□□ -0.71
SS18-212ENST00000579061 HSPB11Q9Y547 144 aa10.64□□□□□ -0.71
SS18-212ENST00000579061 SNRPCP09234 159 aaKnown RBP10.63□□□□□ -0.71
SS18-212ENST00000579061 HIST1H1EP10412 219 aaKnown RBP10.63□□□□□ -0.71
SS18-212ENST00000579061 RHOBP62745 196 aa10.63□□□□□ -0.71
SS18-212ENST00000579061 PDE6HQ13956 83 aa10.63□□□□□ -0.71
SS18-212ENST00000579061 ATP5SQ99766 215 aa10.63□□□□□ -0.71
SS18-212ENST00000579061 ZNF586Q9NXT0 402 aa10.63□□□□□ -0.71
SS18-212ENST00000579061 DKK2Q9UBU2 259 aa10.63□□□□□ -0.71
SS18-212ENST00000579061 ALG5Q9Y673 324 aa10.63□□□□□ -0.71
SS18-212ENST00000579061 LOC102723971A0A1B0GUV8 181 aa10.62□□□□□ -0.71
SS18-212ENST00000579061 IGLL5B9A064 214 aa10.62□□□□□ -0.71
SS18-212ENST00000579061 C17orf112F2Z3M2 114 aa10.62□□□□□ -0.71
SS18-212ENST00000579061 H3BTX0 84 aa10.62□□□□□ -0.71
SS18-212ENST00000579061 RPL12P30050 165 aaKnown RBP10.62□□□□□ -0.71
SS18-212ENST00000579061 TSPOP30536 169 aa10.62□□□□□ -0.71
SS18-212ENST00000579061 OXA1LQ15070 435 aa10.62□□□□□ -0.71
SS18-212ENST00000579061 TMEM256Q8N2U0 113 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms