RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 SAMD13Q5VXD3 122 aa10.2□□□□□ -0.78
SRSF1-202ENST00000578430 SIGLEC15Q6ZMC9 328 aa10.2□□□□□ -0.78
SRSF1-202ENST00000578430 SLC7A5P1Q8MH63 180 aa10.2□□□□□ -0.78
SRSF1-202ENST00000578430 DUX3Q96PT4 197 aa10.2□□□□□ -0.78
SRSF1-202ENST00000578430 ZNF747Q9BV97 191 aa10.2□□□□□ -0.78
SRSF1-202ENST00000578430 ZNF586Q9NXT0 402 aa10.2□□□□□ -0.78
SRSF1-202ENST00000578430 SIGLEC8Q9NYZ4 499 aa10.2□□□□□ -0.78
SRSF1-202ENST00000578430 IGHV3-49A0A0A0MS15 119 aa10.19□□□□□ -0.78
SRSF1-202ENST00000578430 ZNF785A8K8V0 405 aa10.19□□□□□ -0.78
SRSF1-202ENST00000578430 C11orf94C9JXX5 98 aa10.19□□□□□ -0.78
SRSF1-202ENST00000578430 H3BQ15 152 aa10.19□□□□□ -0.78
SRSF1-202ENST00000578430 OVOL1O14753 267 aa10.19□□□□□ -0.78
SRSF1-202ENST00000578430 PDE6DO43924 150 aa10.19□□□□□ -0.78
SRSF1-202ENST00000578430 FOLR2P14207 255 aa10.19□□□□□ -0.78
SRSF1-202ENST00000578430 UBE2G2P60604 165 aa10.19□□□□□ -0.78
SRSF1-202ENST00000578430 PSG9Q00887 426 aa10.19□□□□□ -0.78
SRSF1-202ENST00000578430 CST9LP1Q5W188 147 aa10.19□□□□□ -0.78
SRSF1-202ENST00000578430 RARRES2Q99969 163 aa10.19□□□□□ -0.78
SRSF1-202ENST00000578430 TREM1Q9NP99 234 aa10.19□□□□□ -0.78
SRSF1-202ENST00000578430 OTORQ9NRC9 128 aa10.19□□□□□ -0.78
SRSF1-202ENST00000578430 CLEC5AQ9NY25 188 aa10.19□□□□□ -0.78
SRSF1-202ENST00000578430 SMAD5-AS1Q9Y6J3 95 aa10.19□□□□□ -0.78
SRSF1-202ENST00000578430 IGHV3OR16-13A0A075B7E8 117 aa10.18□□□□□ -0.78
SRSF1-202ENST00000578430 IGHV3-74A0A0B4J1X5 117 aa10.18□□□□□ -0.78
SRSF1-202ENST00000578430 IGHV3-66A0A0C4DH42 116 aa10.18□□□□□ -0.78
SRSF1-202ENST00000578430 F6UZH7 168 aa10.18□□□□□ -0.78
SRSF1-202ENST00000578430 TMEM250H0YL14 139 aa10.18□□□□□ -0.78
SRSF1-202ENST00000578430 HIST2H2BDQ6DRA6 164 aa10.18□□□□□ -0.78
SRSF1-202ENST00000578430 ARL6IP6Q8N6S5 226 aa10.18□□□□□ -0.78
SRSF1-202ENST00000578430 RXFP4Q8TDU9 374 aa10.18□□□□□ -0.78
SRSF1-202ENST00000578430 BLNKQ8WV28 456 aa10.18□□□□□ -0.78
SRSF1-202ENST00000578430 SLC50A1Q9BRV3 221 aa10.18□□□□□ -0.78
SRSF1-202ENST00000578430 YTHDF2Q9Y5A9 579 aaKnown RBP10.18□□□□□ -0.78
SRSF1-202ENST00000578430 NDUFB4O95168 129 aa10.17□□□□□ -0.78
SRSF1-202ENST00000578430 PF4P02776 101 aa10.17□□□□□ -0.78
SRSF1-202ENST00000578430 CSN3P07498 182 aa10.17□□□□□ -0.78
SRSF1-202ENST00000578430 CD81P60033 236 aa10.17□□□□□ -0.78
SRSF1-202ENST00000578430 RANP62826 216 aaKnown RBP10.17□□□□□ -0.78
SRSF1-202ENST00000578430 FAM90A2PQ658T7 463 aa10.17□□□□□ -0.78
SRSF1-202ENST00000578430 TCF24Q7RTU0 167 aa10.17□□□□□ -0.78
SRSF1-202ENST00000578430 CCDC28AQ8IWP9 274 aa10.17□□□□□ -0.78
SRSF1-202ENST00000578430 CITED4Q96RK1 184 aa10.17□□□□□ -0.78
SRSF1-202ENST00000578430 SLC35B3Q9H1N7 401 aa10.17□□□□□ -0.78
SRSF1-202ENST00000578430 AAMDCQ9H7C9 122 aa10.17□□□□□ -0.78
SRSF1-202ENST00000578430 PRELID1Q9Y255 219 aa10.17□□□□□ -0.78
SRSF1-202ENST00000578430 GGTLC3B5MD39 225 aa10.16□□□□□ -0.78
SRSF1-202ENST00000578430 SRP19P09132 144 aaKnown RBP10.16□□□□□ -0.78
SRSF1-202ENST00000578430 ATP5G3P48201 142 aa10.16□□□□□ -0.78
SRSF1-202ENST00000578430 SUMO1P63165 101 aaKnown RBP10.16□□□□□ -0.78
SRSF1-202ENST00000578430 SRSF3P84103 164 aaKnown RBP10.16□□□□□ -0.78
SRSF1-202ENST00000578430 SHISA2Q6UWI4 295 aa10.16□□□□□ -0.78
SRSF1-202ENST00000578430 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.16□□□□□ -0.78
SRSF1-202ENST00000578430 C12orf54Q6X4T0 127 aa10.16□□□□□ -0.78
SRSF1-202ENST00000578430 C3orf56Q8N813 242 aa10.16□□□□□ -0.78
SRSF1-202ENST00000578430 RPUSD4Q96CM3 377 aaKnown RBP10.16□□□□□ -0.78
SRSF1-202ENST00000578430 Q9H3A6 140 aa10.16□□□□□ -0.78
SRSF1-202ENST00000578430 NRN1Q9NPD7 142 aa10.16□□□□□ -0.78
SRSF1-202ENST00000578430 ZNF331Q9NQX6 463 aaPredicted RBP10.16□□□□□ -0.78
SRSF1-202ENST00000578430 TRAV25A0A0B4J276 109 aa10.15□□□□□ -0.78
SRSF1-202ENST00000578430 TMEM218A2RU14 115 aa10.15□□□□□ -0.78
SRSF1-202ENST00000578430 PGPA6NDG6 321 aa10.15□□□□□ -0.78
SRSF1-202ENST00000578430 KRBOX1C9JBD0 128 aa10.15□□□□□ -0.78
SRSF1-202ENST00000578430 PAFAH1B2P68402 229 aa10.15□□□□□ -0.78
SRSF1-202ENST00000578430 ADAMTSL5Q6ZMM2 481 aa10.15□□□□□ -0.78
SRSF1-202ENST00000578430 LINC00482Q8N8I6 264 aa10.15□□□□□ -0.78
SRSF1-202ENST00000578430 C5orf17Q8NAS9 161 aa10.15□□□□□ -0.78
SRSF1-202ENST00000578430 DYNLRB2Q8TF09 96 aa10.15□□□□□ -0.78
SRSF1-202ENST00000578430 HIST1H2BAQ96A08 127 aa10.15□□□□□ -0.78
SRSF1-202ENST00000578430 C11orf52Q96A22 123 aa10.15□□□□□ -0.78
SRSF1-202ENST00000578430 MRPL53Q96EL3 112 aaKnown RBP10.15□□□□□ -0.78
SRSF1-202ENST00000578430 C17orf77Q96MU5 243 aa10.15□□□□□ -0.78
SRSF1-202ENST00000578430 MLXQ9UH92 298 aa10.15□□□□□ -0.78
SRSF1-202ENST00000578430 TRAV2A0A0B4J234 112 aa10.14□□□□□ -0.79
SRSF1-202ENST00000578430 RPL11P62913 178 aaKnown RBP10.14□□□□□ -0.79
SRSF1-202ENST00000578430 CMTM2Q8TAZ6 248 aa10.14□□□□□ -0.79
SRSF1-202ENST00000578430 EPDR1Q9UM22 224 aa10.14□□□□□ -0.79
SRSF1-202ENST00000578430 SERTM2A0A1B0GWG4 89 aa10.13□□□□□ -0.79
SRSF1-202ENST00000578430 C9JQL5 133 aa10.13□□□□□ -0.79
SRSF1-202ENST00000578430 H3BTX0 84 aa10.13□□□□□ -0.79
SRSF1-202ENST00000578430 SLC17A3O00476 420 aa10.13□□□□□ -0.79
SRSF1-202ENST00000578430 ISLRO14498 428 aa10.13□□□□□ -0.79
SRSF1-202ENST00000578430 SLC25A5P05141 298 aaKnown RBP10.13□□□□□ -0.79
SRSF1-202ENST00000578430 SNRPCP09234 159 aaKnown RBP10.13□□□□□ -0.79
SRSF1-202ENST00000578430 SFTA3P0C7M3 94 aa10.13□□□□□ -0.79
SRSF1-202ENST00000578430 EDN2P20800 178 aa10.13□□□□□ -0.79
SRSF1-202ENST00000578430 CSN1S1P47710 185 aa10.13□□□□□ -0.79
SRSF1-202ENST00000578430 DEFB114Q30KQ6 69 aa10.13□□□□□ -0.79
SRSF1-202ENST00000578430 FAM74A3Q4VXF1 159 aa10.13□□□□□ -0.79
SRSF1-202ENST00000578430 SOHLH1Q5JUK2 328 aa10.13□□□□□ -0.79
SRSF1-202ENST00000578430 OR2K2Q8NGT1 345 aa10.13□□□□□ -0.79
SRSF1-202ENST00000578430 C16orf92Q96LL3 132 aa10.13□□□□□ -0.79
SRSF1-202ENST00000578430 DNASE2O00115 360 aaPredicted RBP10.12□□□□□ -0.79
SRSF1-202ENST00000578430 PEX7O00628 323 aa10.12□□□□□ -0.79
SRSF1-202ENST00000578430 SOCS3O14543 225 aa10.12□□□□□ -0.79
SRSF1-202ENST00000578430 TSPAN4O14817 238 aa10.12□□□□□ -0.79
SRSF1-202ENST00000578430 S100A9P06702 114 aaKnown RBP10.12□□□□□ -0.79
SRSF1-202ENST00000578430 S100A1P23297 94 aa10.12□□□□□ -0.79
SRSF1-202ENST00000578430 ID1P41134 155 aa10.12□□□□□ -0.79
SRSF1-202ENST00000578430 RBPMS2Q6ZRY4 209 aaKnown RBP10.12□□□□□ -0.79
SRSF1-202ENST00000578430 EXOC3-AS1Q8N2X6 119 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms