RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 MIFP14174 115 aa17.07■□□□□ 0.32
SNF8-217ENST00000576353 ATP5SQ99766 215 aa17.07■□□□□ 0.32
SNF8-217ENST00000576353 WDR61Q9GZS3 305 aaKnown RBP17.07■□□□□ 0.32
SNF8-217ENST00000576353 CXorf65A6NEN9 183 aa17.06■□□□□ 0.32
SNF8-217ENST00000576353 FCN2Q15485 313 aa17.06■□□□□ 0.32
SNF8-217ENST00000576353 PSG3Q16557 428 aa17.06■□□□□ 0.32
SNF8-217ENST00000576353 SLC50A1Q9BRV3 221 aa17.06■□□□□ 0.32
SNF8-217ENST00000576353 HRH4Q9H3N8 390 aa17.06■□□□□ 0.32
SNF8-217ENST00000576353 TRAV5A0A0B4J249 113 aa17.05■□□□□ 0.32
SNF8-217ENST00000576353 C17orf112F2Z3M2 114 aa17.05■□□□□ 0.32
SNF8-217ENST00000576353 GUK1Q16774 197 aa17.05■□□□□ 0.32
SNF8-217ENST00000576353 Q8NAQ8 132 aa17.05■□□□□ 0.32
SNF8-217ENST00000576353 OR11H7Q8NGC8 314 aa17.05■□□□□ 0.32
SNF8-217ENST00000576353 ZNF331Q9NQX6 463 aaPredicted RBP17.05■□□□□ 0.32
SNF8-217ENST00000576353 X6R8D5 127 aa17.05■□□□□ 0.32
SNF8-217ENST00000576353 A8MTW9 85 aa17.04■□□□□ 0.32
SNF8-217ENST00000576353 IFNA5P01569 189 aa17.04■□□□□ 0.32
SNF8-217ENST00000576353 IGLC2P0DOY2 106 aa17.04■□□□□ 0.32
SNF8-217ENST00000576353 FXYD7P58549 80 aa17.04■□□□□ 0.32
SNF8-217ENST00000576353 PMS2P11Q13670 270 aa17.04■□□□□ 0.32
SNF8-217ENST00000576353 C11orf45Q8TAV5 145 aa17.04■□□□□ 0.32
SNF8-217ENST00000576353 IGHV4-28A0A0C4DH34 117 aa17.03■□□□□ 0.32
SNF8-217ENST00000576353 DEFB4AO15263 64 aa17.03■□□□□ 0.32
SNF8-217ENST00000576353 SNRPCP09234 159 aaKnown RBP17.03■□□□□ 0.32
SNF8-217ENST00000576353 CNN1P51911 297 aaKnown RBP17.03■□□□□ 0.32
SNF8-217ENST00000576353 SCGB1C1Q8TD33 95 aa17.03■□□□□ 0.32
SNF8-217ENST00000576353 ASB13Q8WXK3 278 aa17.03■□□□□ 0.32
SNF8-217ENST00000576353 MFFQ9GZY8 342 aa17.03■□□□□ 0.32
SNF8-217ENST00000576353 SLC35B3Q9H1N7 401 aa17.03■□□□□ 0.32
SNF8-217ENST00000576353 H3BQ15 152 aa17.02■□□□□ 0.32
SNF8-217ENST00000576353 HLA-DMBP28068 263 aa17.02■□□□□ 0.32
SNF8-217ENST00000576353 SMIM3Q9BZL3 60 aa17.02■□□□□ 0.32
SNF8-217ENST00000576353 TMEM14CQ9P0S9 112 aa17.02■□□□□ 0.32
SNF8-217ENST00000576353 KMT2CQ8NEZ4 4911 aaKnown RBP17.01■□□□□ 0.31
SNF8-217ENST00000576353 NUPR2A6NF83 97 aa17.01■□□□□ 0.31
SNF8-217ENST00000576353 AMBPP02760 352 aa17.01■□□□□ 0.31
SNF8-217ENST00000576353 GCSAMLQ5JQS6 135 aa17.01■□□□□ 0.31
SNF8-217ENST00000576353 ZNF705AQ6ZN79 300 aaPredicted RBP17.01■□□□□ 0.31
SNF8-217ENST00000576353 OR8A1Q8NGG7 326 aa17.01■□□□□ 0.31
SNF8-217ENST00000576353 RPUSD4Q96CM3 377 aaKnown RBP17.01■□□□□ 0.31
SNF8-217ENST00000576353 H3BTX0 84 aa17■□□□□ 0.31
SNF8-217ENST00000576353 GIPP09681 153 aaPredicted RBP17■□□□□ 0.31
SNF8-217ENST00000576353 ZNF705DP0CH99 300 aaPredicted RBP17■□□□□ 0.31
SNF8-217ENST00000576353 ZNF705BP0CI00 300 aaPredicted RBP17■□□□□ 0.31
SNF8-217ENST00000576353 RBMY1A1P0DJD3 496 aaKnown RBP17■□□□□ 0.31
SNF8-217ENST00000576353 RBMY1CP0DJD4 496 aa17■□□□□ 0.31
SNF8-217ENST00000576353 HIST1H1AQ02539 215 aaPredicted RBP17■□□□□ 0.31
SNF8-217ENST00000576353 OXA1LQ15070 435 aa17■□□□□ 0.31
SNF8-217ENST00000576353 RBMY1FQ15415 496 aaKnown RBP17■□□□□ 0.31
SNF8-217ENST00000576353 AMTNQ6UX39 209 aa17■□□□□ 0.31
SNF8-217ENST00000576353 SAT2Q96F10 170 aaPredicted RBP17■□□□□ 0.31
SNF8-217ENST00000576353 NEU1Q99519 415 aa17■□□□□ 0.31
SNF8-217ENST00000576353 GOLT1BQ9Y3E0 138 aa17■□□□□ 0.31
SNF8-217ENST00000576353 SMIM9A6NGZ8 99 aa16.99■□□□□ 0.31
SNF8-217ENST00000576353 CEMP1Q6PRD7 247 aaPredicted RBP16.99■□□□□ 0.31
SNF8-217ENST00000576353 PARD6GQ9BYG4 376 aaPredicted RBP16.99■□□□□ 0.31
SNF8-217ENST00000576353 PPP1R14DQ9NXH3 145 aa16.99■□□□□ 0.31
SNF8-217ENST00000576353 ZNF705FA8MVS1 300 aaPredicted RBP16.98■□□□□ 0.31
SNF8-217ENST00000576353 SLC17A3O00476 420 aa16.98■□□□□ 0.31
SNF8-217ENST00000576353 ZNF253O75346 499 aa16.98■□□□□ 0.31
SNF8-217ENST00000576353 HIST1H1EP10412 219 aaKnown RBP16.98■□□□□ 0.31
SNF8-217ENST00000576353 NANOS2P60321 138 aaKnown RBP16.98■□□□□ 0.31
SNF8-217ENST00000576353 MRPL32Q9BYC8 188 aaKnown RBP16.98■□□□□ 0.31
SNF8-217ENST00000576353 ZNF586Q9NXT0 402 aa16.98■□□□□ 0.31
SNF8-217ENST00000576353 KLK5Q9Y337 293 aaPredicted RBP16.98■□□□□ 0.31
SNF8-217ENST00000576353 CSMD3Q7Z407 3707 aa16.97■□□□□ 0.31
SNF8-217ENST00000576353 IGHV3OR16-12A0A075B7B8 117 aa16.97■□□□□ 0.31
SNF8-217ENST00000576353 LCE6AA0A183 80 aa16.97■□□□□ 0.31
SNF8-217ENST00000576353 RHOBP62745 196 aa16.97■□□□□ 0.31
SNF8-217ENST00000576353 PHLDA1Q8WV24 401 aaPredicted RBP16.97■□□□□ 0.31
SNF8-217ENST00000576353 IGF2BP2-AS1Q96M15 143 aa16.97■□□□□ 0.31
SNF8-217ENST00000576353 TRBV19A0A075B6N1 114 aa16.96■□□□□ 0.31
SNF8-217ENST00000576353 JTBO76095 146 aa16.96■□□□□ 0.31
SNF8-217ENST00000576353 SLC25A2Q9BXI2 301 aa16.96■□□□□ 0.31
SNF8-217ENST00000576353 WFDC1Q9HC57 220 aa16.96■□□□□ 0.31
SNF8-217ENST00000576353 FUT9Q9Y231 359 aa16.96■□□□□ 0.31
SNF8-217ENST00000576353 TIMM9Q9Y5J7 89 aa16.96■□□□□ 0.31
SNF8-217ENST00000576353 BOLA2-SMG1P6H3BVE0 249 aa16.95■□□□□ 0.3
SNF8-217ENST00000576353 PDE6HQ13956 83 aa16.95■□□□□ 0.3
SNF8-217ENST00000576353 SPINK13Q1W4C9 94 aa16.95■□□□□ 0.3
SNF8-217ENST00000576353 FFAR4Q5NUL3 377 aa16.95■□□□□ 0.3
SNF8-217ENST00000576353 MIR17HGQ75NE6 70 aa16.95■□□□□ 0.3
SNF8-217ENST00000576353 OR10J6PQ8NGY7 276 aa16.95■□□□□ 0.3
SNF8-217ENST00000576353 AQP10Q96PS8 301 aa16.95■□□□□ 0.3
SNF8-217ENST00000576353 TENM2Q9NT68 2774 aa16.94■□□□□ 0.3
SNF8-217ENST00000576353 TMEM189A5PLL7 270 aa16.94■□□□□ 0.3
SNF8-217ENST00000576353 M0R2Z0 102 aa16.94■□□□□ 0.3
SNF8-217ENST00000576353 INSP01308 110 aa16.94■□□□□ 0.3
SNF8-217ENST00000576353 PYYP10082 97 aa16.94■□□□□ 0.3
SNF8-217ENST00000576353 C1orf158Q8N1D5 194 aa16.94■□□□□ 0.3
SNF8-217ENST00000576353 FAM167A-AS1Q96KT0 104 aa16.94■□□□□ 0.3
SNF8-217ENST00000576353 TMEM208Q9BTX3 173 aa16.94■□□□□ 0.3
SNF8-217ENST00000576353 OR51M1Q9H341 326 aa16.94■□□□□ 0.3
SNF8-217ENST00000576353 RFNGQ9Y644 331 aa16.94■□□□□ 0.3
SNF8-217ENST00000576353 STARD9Q9P2P6 4700 aa16.94■□□□□ 0.3
SNF8-217ENST00000576353 Q5BKY6 102 aa16.93■□□□□ 0.3
SNF8-217ENST00000576353 HBE1P02100 147 aa16.92■□□□□ 0.3
SNF8-217ENST00000576353 ZNF266Q14584 549 aa16.92■□□□□ 0.3
SNF8-217ENST00000576353 INO80EQ8NBZ0 244 aaPredicted RBP16.92■□□□□ 0.3
SNF8-217ENST00000576353 BLNKQ8WV28 456 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 202.5 ms