RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 TP53TG1Q9Y2A0 90 aa7.06□□□□□ -1.28
CCDC40-214ENST00000575431 U3KQK5 164 aa7.06□□□□□ -1.28
CCDC40-214ENST00000575431 HLA-DRB4X5D2U9 266 aa7.06□□□□□ -1.28
CCDC40-214ENST00000575431 TRAV5A0A0B4J249 113 aa7.05□□□□□ -1.28
CCDC40-214ENST00000575431 KANTRA0A1W2PQU2 76 aa7.05□□□□□ -1.28
CCDC40-214ENST00000575431 SMLR1H3BR10 107 aa7.05□□□□□ -1.28
CCDC40-214ENST00000575431 DUSP14O95147 198 aaKnown RBP7.05□□□□□ -1.28
CCDC40-214ENST00000575431 RPL35AP18077 110 aaKnown RBP7.05□□□□□ -1.28
CCDC40-214ENST00000575431 ATP6V0CP27449 155 aa7.05□□□□□ -1.28
CCDC40-214ENST00000575431 PSG9Q00887 426 aa7.05□□□□□ -1.28
CCDC40-214ENST00000575431 ZNF124Q15973 351 aa7.05□□□□□ -1.28
CCDC40-214ENST00000575431 KHDC3LQ587J8 217 aa7.05□□□□□ -1.28
CCDC40-214ENST00000575431 GCSAMLQ5JQS6 135 aa7.05□□□□□ -1.28
CCDC40-214ENST00000575431 MORN5Q5VZ52 161 aa7.05□□□□□ -1.28
CCDC40-214ENST00000575431 RPL7L1Q6DKI1 246 aaKnown RBP7.05□□□□□ -1.28
CCDC40-214ENST00000575431 MIR17HGQ75NE6 70 aa7.05□□□□□ -1.28
CCDC40-214ENST00000575431 AKAP14Q86UN6 197 aa7.05□□□□□ -1.28
CCDC40-214ENST00000575431 OR10G4Q8NGN3 311 aa7.05□□□□□ -1.28
CCDC40-214ENST00000575431 OR10G9Q8NGN4 311 aa7.05□□□□□ -1.28
CCDC40-214ENST00000575431 OR10G7Q8NGN6 311 aa7.05□□□□□ -1.28
CCDC40-214ENST00000575431 HYLS1Q96M11 299 aa7.05□□□□□ -1.28
CCDC40-214ENST00000575431 C17orf77Q96MU5 243 aa7.05□□□□□ -1.28
CCDC40-214ENST00000575431 C1QTNF4Q9BXJ3 329 aa7.05□□□□□ -1.28
CCDC40-214ENST00000575431 SAV1Q9H4B6 383 aaPredicted RBP7.05□□□□□ -1.28
CCDC40-214ENST00000575431 ZNF331Q9NQX6 463 aaPredicted RBP7.05□□□□□ -1.28
CCDC40-214ENST00000575431 MEGF8Q7Z7M0 2845 aa7.05□□□□□ -1.28
CCDC40-214ENST00000575431 CMYA5Q8N3K9 4069 aa7.05□□□□□ -1.28
CCDC40-214ENST00000575431 TRAV8-2A0A0B4J237 113 aa7.04□□□□□ -1.28
CCDC40-214ENST00000575431 KNCNA6PVL3 124 aa7.04□□□□□ -1.28
CCDC40-214ENST00000575431 H3BMM0 161 aa7.04□□□□□ -1.28
CCDC40-214ENST00000575431 PSG3Q16557 428 aa7.04□□□□□ -1.28
CCDC40-214ENST00000575431 PQLC2Q6ZP29 291 aa7.04□□□□□ -1.28
CCDC40-214ENST00000575431 OR11H4Q8NGC9 324 aa7.04□□□□□ -1.28
CCDC40-214ENST00000575431 SAT2Q96F10 170 aaPredicted RBP7.04□□□□□ -1.28
CCDC40-214ENST00000575431 FAM167A-AS1Q96KT0 104 aa7.04□□□□□ -1.28
CCDC40-214ENST00000575431 RCHY1Q96PM5 261 aa7.04□□□□□ -1.28
CCDC40-214ENST00000575431 PAXXQ9BUH6 204 aa7.04□□□□□ -1.28
CCDC40-214ENST00000575431 SLC25A2Q9BXI2 301 aa7.04□□□□□ -1.28
CCDC40-214ENST00000575431 PRELID1Q9Y255 219 aa7.04□□□□□ -1.28
CCDC40-214ENST00000575431 TRBV19A0A075B6N1 114 aa7.03□□□□□ -1.28
CCDC40-214ENST00000575431 A0A0J9YX75 114 aa7.03□□□□□ -1.28
CCDC40-214ENST00000575431 H3BQ15 152 aa7.03□□□□□ -1.28
CCDC40-214ENST00000575431 OR7C2O60412 319 aa7.03□□□□□ -1.28
CCDC40-214ENST00000575431 PFDN1O60925 122 aa7.03□□□□□ -1.28
CCDC40-214ENST00000575431 C1QBP02746 253 aa7.03□□□□□ -1.28
CCDC40-214ENST00000575431 NBEAP1P0C6P0 100 aa7.03□□□□□ -1.28
CCDC40-214ENST00000575431 C4BPBP20851 252 aa7.03□□□□□ -1.28
CCDC40-214ENST00000575431 LYPD1Q8N2G4 141 aa7.03□□□□□ -1.28
CCDC40-214ENST00000575431 ZNF738Q8NE65 137 aa7.03□□□□□ -1.28
CCDC40-214ENST00000575431 RNF141Q8WVD5 230 aa7.03□□□□□ -1.28
CCDC40-214ENST00000575431 RNF183Q96D59 192 aa7.03□□□□□ -1.28
CCDC40-214ENST00000575431 MRPL53Q96EL3 112 aaKnown RBP7.03□□□□□ -1.28
CCDC40-214ENST00000575431 ACTR3CQ9C0K3 210 aaPredicted RBP7.03□□□□□ -1.28
CCDC40-214ENST00000575431 AAMDCQ9H7C9 122 aa7.03□□□□□ -1.28
CCDC40-214ENST00000575431 CYTL1Q9NRR1 136 aa7.03□□□□□ -1.28
CCDC40-214ENST00000575431 ZNF586Q9NXT0 402 aa7.03□□□□□ -1.28
CCDC40-214ENST00000575431 hCG_2014768A0A024R1R8 64 aa7.02□□□□□ -1.29
CCDC40-214ENST00000575431 BCL2L11O43521 198 aa7.02□□□□□ -1.29
CCDC40-214ENST00000575431 SPRY2O43597 315 aa7.02□□□□□ -1.29
CCDC40-214ENST00000575431 CA1P00915 261 aaPredicted RBP7.02□□□□□ -1.29
CCDC40-214ENST00000575431 AMBPP02760 352 aa7.02□□□□□ -1.29
CCDC40-214ENST00000575431 SEC11BP0C7V7 166 aa7.02□□□□□ -1.29
CCDC40-214ENST00000575431 PYYP10082 97 aa7.02□□□□□ -1.29
CCDC40-214ENST00000575431 CDC34P49427 236 aaPredicted RBP7.02□□□□□ -1.29
CCDC40-214ENST00000575431 RAB2AP61019 212 aa7.02□□□□□ -1.29
CCDC40-214ENST00000575431 FAM122CQ6P4D5 195 aa7.02□□□□□ -1.29
CCDC40-214ENST00000575431 RNF182Q8N6D2 247 aa7.02□□□□□ -1.29
CCDC40-214ENST00000575431 OR4B1Q8NGF8 309 aa7.02□□□□□ -1.29
CCDC40-214ENST00000575431 OR8A1Q8NGG7 326 aa7.02□□□□□ -1.29
CCDC40-214ENST00000575431 RPUSD4Q96CM3 377 aaKnown RBP7.02□□□□□ -1.29
CCDC40-214ENST00000575431 C20orf173Q96LM9 149 aa7.02□□□□□ -1.29
CCDC40-214ENST00000575431 A8MTW9 85 aa7.01□□□□□ -1.29
CCDC40-214ENST00000575431 STAG3L2P0CL84 134 aa7.01□□□□□ -1.29
CCDC40-214ENST00000575431 STAG3L3P0CL85 134 aa7.01□□□□□ -1.29
CCDC40-214ENST00000575431 UBE2L3P68036 154 aaKnown RBP7.01□□□□□ -1.29
CCDC40-214ENST00000575431 DEFB135Q30KP9 77 aa7.01□□□□□ -1.29
CCDC40-214ENST00000575431 FAM74A1Q5RGS3 127 aa7.01□□□□□ -1.29
CCDC40-214ENST00000575431 AKR1C8PQ5T2L2 129 aa7.01□□□□□ -1.29
CCDC40-214ENST00000575431 GDF5OSQ5U4N7 250 aa7.01□□□□□ -1.29
CCDC40-214ENST00000575431 EIF5AL1Q6IS14 154 aaKnown RBP7.01□□□□□ -1.29
CCDC40-214ENST00000575431 TMUB2Q71RG4 321 aa7.01□□□□□ -1.29
CCDC40-214ENST00000575431 RPP25LQ8N5L8 163 aaKnown RBP7.01□□□□□ -1.29
CCDC40-214ENST00000575431 OR10J6PQ8NGY7 276 aa7.01□□□□□ -1.29
CCDC40-214ENST00000575431 BLNKQ8WV28 456 aa7.01□□□□□ -1.29
CCDC40-214ENST00000575431 FXYD5Q96DB9 178 aa7.01□□□□□ -1.29
CCDC40-214ENST00000575431 WWC2-AS2Q96NR7 200 aa7.01□□□□□ -1.29
CCDC40-214ENST00000575431 OVOL2Q9BRP0 275 aa7.01□□□□□ -1.29
CCDC40-214ENST00000575431 ZNF471Q9BX82 626 aaPredicted RBP7.01□□□□□ -1.29
CCDC40-214ENST00000575431 SH3BGRL3Q9H299 93 aa7.01□□□□□ -1.29
CCDC40-214ENST00000575431 UMAD1C9J7I0 102 aa7□□□□□ -1.29
CCDC40-214ENST00000575431 F6UB75 175 aa7□□□□□ -1.29
CCDC40-214ENST00000575431 H3BTX0 84 aa7□□□□□ -1.29
CCDC40-214ENST00000575431 SLC17A3O00476 420 aa7□□□□□ -1.29
CCDC40-214ENST00000575431 NDUFB4O95168 129 aa7□□□□□ -1.29
CCDC40-214ENST00000575431 CXorf1O96002 111 aa7□□□□□ -1.29
CCDC40-214ENST00000575431 SNRPCP09234 159 aaKnown RBP7□□□□□ -1.29
CCDC40-214ENST00000575431 OR10J4P0C629 311 aa7□□□□□ -1.29
CCDC40-214ENST00000575431 TPT1P13693 172 aaKnown RBP7□□□□□ -1.29
CCDC40-214ENST00000575431 CNN1P51911 297 aaKnown RBP7□□□□□ -1.29
CCDC40-214ENST00000575431 IGFL4Q6B9Z1 124 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms