RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 PSG3Q16557 428 aa14.09□□□□□ -0.15
SCARF1-208ENST00000574545 MORN5Q5VZ52 161 aa14.09□□□□□ -0.15
SCARF1-208ENST00000574545 ZNF767PQ75MW2 155 aa14.09□□□□□ -0.15
SCARF1-208ENST00000574545 NRARPQ7Z6K4 114 aa14.09□□□□□ -0.15
SCARF1-208ENST00000574545 RPP25LQ8N5L8 163 aaKnown RBP14.09□□□□□ -0.15
SCARF1-208ENST00000574545 IGF2BP2-AS1Q96M15 143 aa14.09□□□□□ -0.15
SCARF1-208ENST00000574545 UQCC1Q9NVA1 299 aa14.09□□□□□ -0.15
SCARF1-208ENST00000574545 RNF24Q9Y225 148 aa14.09□□□□□ -0.15
SCARF1-208ENST00000574545 RFNGQ9Y644 331 aa14.09□□□□□ -0.15
SCARF1-208ENST00000574545 DNAH17Q9UFH2 4485 aa14.08□□□□□ -0.15
SCARF1-208ENST00000574545 TMEM189A5PLL7 270 aa14.08□□□□□ -0.16
SCARF1-208ENST00000574545 S100A11P31949 105 aa14.08□□□□□ -0.16
SCARF1-208ENST00000574545 S100A10P60903 97 aa14.08□□□□□ -0.16
SCARF1-208ENST00000574545 MIC13Q5XKP0 118 aa14.08□□□□□ -0.16
SCARF1-208ENST00000574545 ENKURQ8TC29 256 aa14.08□□□□□ -0.16
SCARF1-208ENST00000574545 CHAC2Q8WUX2 184 aa14.08□□□□□ -0.16
SCARF1-208ENST00000574545 GOLT1BQ9Y3E0 138 aa14.08□□□□□ -0.16
SCARF1-208ENST00000574545 CXCL2P19875 107 aa14.07□□□□□ -0.16
SCARF1-208ENST00000574545 OPCMLQ14982 345 aa14.07□□□□□ -0.16
SCARF1-208ENST00000574545 OR8A1Q8NGG7 326 aa14.07□□□□□ -0.16
SCARF1-208ENST00000574545 DNAJC4Q9NNZ3 241 aa14.07□□□□□ -0.16
SCARF1-208ENST00000574545 COX7A2P2O60397 106 aa14.06□□□□□ -0.16
SCARF1-208ENST00000574545 SIX6O95475 246 aa14.06□□□□□ -0.16
SCARF1-208ENST00000574545 SPART-AS1P0CW21 52 aa14.06□□□□□ -0.16
SCARF1-208ENST00000574545 RPL29P47914 159 aaKnown RBP14.06□□□□□ -0.16
SCARF1-208ENST00000574545 RAB31Q13636 194 aa14.06□□□□□ -0.16
SCARF1-208ENST00000574545 C10orf113Q5VZT2 155 aa14.06□□□□□ -0.16
SCARF1-208ENST00000574545 BPIFA4PQ86YQ2 179 aa14.06□□□□□ -0.16
SCARF1-208ENST00000574545 ZNF738Q8NE65 137 aa14.06□□□□□ -0.16
SCARF1-208ENST00000574545 MARVELD1Q9BSK0 173 aa14.06□□□□□ -0.16
SCARF1-208ENST00000574545 RNF126Q9BV68 326 aa14.06□□□□□ -0.16
SCARF1-208ENST00000574545 GPN1Q9HCN4 374 aaPredicted RBP14.06□□□□□ -0.16
SCARF1-208ENST00000574545 ZNF331Q9NQX6 463 aaPredicted RBP14.06□□□□□ -0.16
SCARF1-208ENST00000574545 DKK2Q9UBU2 259 aa14.06□□□□□ -0.16
SCARF1-208ENST00000574545 FAT2Q9NYQ8 4349 aa14.06□□□□□ -0.16
SCARF1-208ENST00000574545 IGHV4-4A0A075B6R2 117 aa14.05□□□□□ -0.16
SCARF1-208ENST00000574545 DEFB131BA0A096LNP1 70 aa14.05□□□□□ -0.16
SCARF1-208ENST00000574545 INMT-MINDY4F8WBC2 141 aa14.05□□□□□ -0.16
SCARF1-208ENST00000574545 M0R2Z0 102 aa14.05□□□□□ -0.16
SCARF1-208ENST00000574545 AMBPP02760 352 aa14.05□□□□□ -0.16
SCARF1-208ENST00000574545 IGLC2P0DOY2 106 aa14.05□□□□□ -0.16
SCARF1-208ENST00000574545 ATP6V1FQ16864 119 aa14.05□□□□□ -0.16
SCARF1-208ENST00000574545 SPINK13Q1W4C9 94 aa14.05□□□□□ -0.16
SCARF1-208ENST00000574545 LCN15Q6UWW0 184 aa14.05□□□□□ -0.16
SCARF1-208ENST00000574545 Q6ZRG5 221 aa14.05□□□□□ -0.16
SCARF1-208ENST00000574545 SAT2Q96F10 170 aaPredicted RBP14.05□□□□□ -0.16
SCARF1-208ENST00000574545 NMES1Q9C002 83 aa14.05□□□□□ -0.16
SCARF1-208ENST00000574545 H0YIZ8 118 aa14.04□□□□□ -0.16
SCARF1-208ENST00000574545 PRAF2O60831 178 aa14.04□□□□□ -0.16
SCARF1-208ENST00000574545 HBE1P02100 147 aa14.04□□□□□ -0.16
SCARF1-208ENST00000574545 SNRPCP09234 159 aaKnown RBP14.04□□□□□ -0.16
SCARF1-208ENST00000574545 EMP1P54849 157 aa14.04□□□□□ -0.16
SCARF1-208ENST00000574545 STX12Q86Y82 276 aa14.04□□□□□ -0.16
SCARF1-208ENST00000574545 LRRC20Q8TCA0 184 aa14.04□□□□□ -0.16
SCARF1-208ENST00000574545 TRAV5A0A0B4J249 113 aa14.03□□□□□ -0.16
SCARF1-208ENST00000574545 UBE2L5PA0A1B0GUS4 154 aa14.03□□□□□ -0.16
SCARF1-208ENST00000574545 LOC102723971A0A1B0GUV8 181 aa14.03□□□□□ -0.16
SCARF1-208ENST00000574545 H3BQ15 152 aa14.03□□□□□ -0.16
SCARF1-208ENST00000574545 SLC17A3O00476 420 aa14.03□□□□□ -0.16
SCARF1-208ENST00000574545 HBG1P69891 147 aa14.03□□□□□ -0.16
SCARF1-208ENST00000574545 HBG2P69892 147 aa14.03□□□□□ -0.16
SCARF1-208ENST00000574545 NHLH2Q02577 135 aa14.03□□□□□ -0.16
SCARF1-208ENST00000574545 RRN3P1Q2M238 152 aa14.03□□□□□ -0.16
SCARF1-208ENST00000574545 FAM222AQ5U5X8 452 aa14.03□□□□□ -0.16
SCARF1-208ENST00000574545 OR1L4Q8NGR5 311 aa14.03□□□□□ -0.16
SCARF1-208ENST00000574545 RPUSD4Q96CM3 377 aaKnown RBP14.03□□□□□ -0.16
SCARF1-208ENST00000574545 SLC50A1Q9BRV3 221 aa14.03□□□□□ -0.16
SCARF1-208ENST00000574545 SLC39A9Q9NUM3 307 aa14.03□□□□□ -0.16
SCARF1-208ENST00000574545 PLA2G2EQ9NZK7 142 aa14.03□□□□□ -0.16
SCARF1-208ENST00000574545 BOLA2-SMG1P6H3BVE0 249 aa14.02□□□□□ -0.17
SCARF1-208ENST00000574545 PRM2P04554 102 aa14.02□□□□□ -0.17
SCARF1-208ENST00000574545 PRB4P10163 310 aaPredicted RBP14.02□□□□□ -0.17
SCARF1-208ENST00000574545 B2MP61769 119 aa14.02□□□□□ -0.17
SCARF1-208ENST00000574545 HIST1H1AQ02539 215 aaPredicted RBP14.02□□□□□ -0.17
SCARF1-208ENST00000574545 BAXQ07812 192 aa14.02□□□□□ -0.17
SCARF1-208ENST00000574545 OXA1LQ15070 435 aa14.02□□□□□ -0.17
SCARF1-208ENST00000574545 OR5AC2Q9NZP5 309 aa14.02□□□□□ -0.17
SCARF1-208ENST00000574545 YTHDF2Q9Y5A9 579 aaKnown RBP14.02□□□□□ -0.17
SCARF1-208ENST00000574545 PRAC2D3DTV9 90 aa14.01□□□□□ -0.17
SCARF1-208ENST00000574545 E5RGE8 158 aa14.01□□□□□ -0.17
SCARF1-208ENST00000574545 H3BTX0 84 aa14.01□□□□□ -0.17
SCARF1-208ENST00000574545 INSP01308 110 aa14.01□□□□□ -0.17
SCARF1-208ENST00000574545 BAP18Q8IXM2 172 aa14.01□□□□□ -0.17
SCARF1-208ENST00000574545 PFDN5Q99471 154 aa14.01□□□□□ -0.17
SCARF1-208ENST00000574545 NIPSNAP3BQ9BS92 247 aa14.01□□□□□ -0.17
SCARF1-208ENST00000574545 TRAV12-2A0A075B6T6 113 aa14□□□□□ -0.17
SCARF1-208ENST00000574545 TEX48A0A1B0GUV7 120 aa14□□□□□ -0.17
SCARF1-208ENST00000574545 FGF7P21781 194 aa14□□□□□ -0.17
SCARF1-208ENST00000574545 H2BFSP57053 126 aa14□□□□□ -0.17
SCARF1-208ENST00000574545 TMEM208Q9BTX3 173 aa14□□□□□ -0.17
SCARF1-208ENST00000574545 BATF3Q9NR55 127 aa14□□□□□ -0.17
SCARF1-208ENST00000574545 ZNF586Q9NXT0 402 aa14□□□□□ -0.17
SCARF1-208ENST00000574545 PXMP4Q9Y6I8 212 aa14□□□□□ -0.17
SCARF1-208ENST00000574545 HECTD4Q9Y4D8 3996 aa13.99□□□□□ -0.17
SCARF1-208ENST00000574545 ZNF705GA8MUZ8 300 aaPredicted RBP13.99□□□□□ -0.17
SCARF1-208ENST00000574545 MPDU1O75352 247 aa13.99□□□□□ -0.17
SCARF1-208ENST00000574545 RLN2P04090 185 aa13.99□□□□□ -0.17
SCARF1-208ENST00000574545 RHOBP62745 196 aa13.99□□□□□ -0.17
SCARF1-208ENST00000574545 CYCSP99999 105 aaKnown RBP13.99□□□□□ -0.17
SCARF1-208ENST00000574545 OR5C1Q8NGR4 320 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms