RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 TMEM219Q86XT9 240 aa8.21□□□□□ -1.09
USP43-205ENST00000574408 GBGT1Q8N5D6 347 aa8.21□□□□□ -1.09
USP43-205ENST00000574408 Q9H3A6 140 aa8.21□□□□□ -1.09
USP43-205ENST00000574408 TP73-AS1Q9UF72 201 aa8.21□□□□□ -1.09
USP43-205ENST00000574408 IGHV1-69DA0A0B4J2H0 117 aa8.21□□□□□ -1.1
USP43-205ENST00000574408 ATP6V0E1O15342 81 aa8.21□□□□□ -1.1
USP43-205ENST00000574408 IGHV1-69P01742 117 aa8.21□□□□□ -1.1
USP43-205ENST00000574408 UBE2G1P62253 170 aa8.21□□□□□ -1.1
USP43-205ENST00000574408 RPEL1Q2QD12 228 aa8.21□□□□□ -1.1
USP43-205ENST00000574408 ACTL10Q5JWF8 245 aa8.21□□□□□ -1.1
USP43-205ENST00000574408 SHANK2-AS3Q9BTD1 123 aa8.21□□□□□ -1.1
USP43-205ENST00000574408 FBXL7Q9UJT9 491 aa8.21□□□□□ -1.1
USP43-205ENST00000574408 UTP20O75691 2785 aaKnown RBP8.2□□□□□ -1.1
USP43-205ENST00000574408 A1L4Q6 167 aa8.2□□□□□ -1.1
USP43-205ENST00000574408 F8W735 103 aaPredicted RBP8.2□□□□□ -1.1
USP43-205ENST00000574408 HIST1H1EP10412 219 aaKnown RBP8.2□□□□□ -1.1
USP43-205ENST00000574408 FOXA3P55318 350 aaPredicted RBP8.2□□□□□ -1.1
USP43-205ENST00000574408 IBA57Q5T440 356 aaKnown RBP8.2□□□□□ -1.1
USP43-205ENST00000574408 ZNF843Q8N446 348 aa8.2□□□□□ -1.1
USP43-205ENST00000574408 OSTCQ9NRP0 149 aa8.2□□□□□ -1.1
USP43-205ENST00000574408 OR2T8A6NH00 312 aa8.2□□□□□ -1.1
USP43-205ENST00000574408 FCGR2BP31994 310 aaPredicted RBP8.2□□□□□ -1.1
USP43-205ENST00000574408 YPEL3P61236 119 aaPredicted RBP8.2□□□□□ -1.1
USP43-205ENST00000574408 C5orf17Q8NAS9 161 aa8.2□□□□□ -1.1
USP43-205ENST00000574408 TMEM14CQ9P0S9 112 aa8.2□□□□□ -1.1
USP43-205ENST00000574408 H3BRN7 92 aa8.2□□□□□ -1.1
USP43-205ENST00000574408 COL5A1-AS1Q5SY13 56 aa8.2□□□□□ -1.1
USP43-205ENST00000574408 Q6ZWC4 215 aa8.2□□□□□ -1.1
USP43-205ENST00000574408 BPIFA4PQ86YQ2 179 aa8.2□□□□□ -1.1
USP43-205ENST00000574408 BCL6BQ8N143 479 aaPredicted RBP8.2□□□□□ -1.1
USP43-205ENST00000574408 SSBP4Q9BWG4 385 aaPredicted RBP8.2□□□□□ -1.1
USP43-205ENST00000574408 CENPEQ02224 2701 aa8.2□□□□□ -1.1
USP43-205ENST00000574408 CRYBG3Q68DQ2 2970 aa8.19□□□□□ -1.1
USP43-205ENST00000574408 LINC01548A6NM66 108 aa8.19□□□□□ -1.1
USP43-205ENST00000574408 G3V318 75 aa8.19□□□□□ -1.1
USP43-205ENST00000574408 IGHV4-38-2P0DP08 117 aa8.19□□□□□ -1.1
USP43-205ENST00000574408 RPL15P61313 204 aaKnown RBP8.19□□□□□ -1.1
USP43-205ENST00000574408 FAM110DQ8TAY7 271 aaPredicted RBP8.19□□□□□ -1.1
USP43-205ENST00000574408 ZNF48Q96MX3 618 aaPredicted RBP8.19□□□□□ -1.1
USP43-205ENST00000574408 NAA38Q9BRA0 125 aaKnown RBP8.19□□□□□ -1.1
USP43-205ENST00000574408 ZNF331Q9NQX6 463 aaPredicted RBP8.19□□□□□ -1.1
USP43-205ENST00000574408 M0QZ24 198 aa8.19□□□□□ -1.1
USP43-205ENST00000574408 LBHQ53QV2 105 aaPredicted RBP8.19□□□□□ -1.1
USP43-205ENST00000574408 OR4F17Q8NGA8 305 aa8.19□□□□□ -1.1
USP43-205ENST00000574408 OR2D3Q8NGH3 330 aa8.19□□□□□ -1.1
USP43-205ENST00000574408 C7orf69Q9H7B7 122 aa8.19□□□□□ -1.1
USP43-205ENST00000574408 WI2-2373I1.2A0A1W2PRP0 233 aa8.19□□□□□ -1.1
USP43-205ENST00000574408 COX6B1P14854 86 aa8.19□□□□□ -1.1
USP43-205ENST00000574408 C1orf194Q5T5A4 169 aa8.19□□□□□ -1.1
USP43-205ENST00000574408 EXOC3-AS1Q8N2X6 119 aa8.19□□□□□ -1.1
USP43-205ENST00000574408 VPS13CQ709C8 3753 aa8.18□□□□□ -1.1
USP43-205ENST00000574408 TRAV9-1A0A075B6T8 112 aa8.18□□□□□ -1.1
USP43-205ENST00000574408 FBLL1A6NHQ2 334 aaKnown RBP8.18□□□□□ -1.1
USP43-205ENST00000574408 TCRAP04437 139 aa8.18□□□□□ -1.1
USP43-205ENST00000574408 MSMBP08118 114 aa8.18□□□□□ -1.1
USP43-205ENST00000574408 RHOGP84095 191 aa8.18□□□□□ -1.1
USP43-205ENST00000574408 C15orf32Q32M92 178 aa8.18□□□□□ -1.1
USP43-205ENST00000574408 C5orf56Q8N8D9 126 aa8.18□□□□□ -1.1
USP43-205ENST00000574408 OTORQ9NRC9 128 aa8.18□□□□□ -1.1
USP43-205ENST00000574408 ANKRD17O75179 2603 aaKnown RBP8.18□□□□□ -1.1
USP43-205ENST00000574408 IGHV3-35A0A0C4DH35 117 aa8.18□□□□□ -1.1
USP43-205ENST00000574408 C17orf77Q96MU5 243 aa8.18□□□□□ -1.1
USP43-205ENST00000574408 CHRDL1Q9BU40 450 aa8.18□□□□□ -1.1
USP43-205ENST00000574408 SOX21Q9Y651 276 aaPredicted RBP8.18□□□□□ -1.1
USP43-205ENST00000574408 SCGB2A1O75556 95 aa8.17□□□□□ -1.1
USP43-205ENST00000574408 GPR183P32249 361 aa8.17□□□□□ -1.1
USP43-205ENST00000574408 MOB4Q9Y3A3 225 aa8.17□□□□□ -1.1
USP43-205ENST00000574408 IGHV3OR16-8A0A075B7F1 116 aa8.17□□□□□ -1.1
USP43-205ENST00000574408 CTSGP08311 255 aa8.17□□□□□ -1.1
USP43-205ENST00000574408 SRSF1Q07955 248 aaKnown RBP eCLIP8.17□□□□□ -1.1
USP43-205ENST00000574408 STPG4Q8N801 248 aa8.17□□□□□ -1.1
USP43-205ENST00000574408 MIEN1Q9BRT3 115 aa8.17□□□□□ -1.1
USP43-205ENST00000574408 NRN1Q9NPD7 142 aa8.17□□□□□ -1.1
USP43-205ENST00000574408 KLF12Q9Y4X4 402 aa8.17□□□□□ -1.1
USP43-205ENST00000574408 TRBV19A0A075B6N1 114 aa8.17□□□□□ -1.1
USP43-205ENST00000574408 M0R2Z0 102 aa8.17□□□□□ -1.1
USP43-205ENST00000574408 RPL19P84098 196 aaKnown RBP8.17□□□□□ -1.1
USP43-205ENST00000574408 LY6EQ16553 131 aa8.17□□□□□ -1.1
USP43-205ENST00000574408 S100A7AQ86SG5 101 aa8.17□□□□□ -1.1
USP43-205ENST00000574408 PIFOQ8TCI5 191 aa8.17□□□□□ -1.1
USP43-205ENST00000574408 GPR82Q96P67 336 aa8.17□□□□□ -1.1
USP43-205ENST00000574408 HIF1ANQ9NWT6 349 aa8.17□□□□□ -1.1
USP43-205ENST00000574408 ABCA12Q86UK0 2595 aa8.17□□□□□ -1.1
USP43-205ENST00000574408 TRAV8-1A0A0A6YYK1 113 aa8.16□□□□□ -1.1
USP43-205ENST00000574408 IGLC2P0DOY2 106 aa8.16□□□□□ -1.1
USP43-205ENST00000574408 GOLT1AQ6ZVE7 132 aa8.16□□□□□ -1.1
USP43-205ENST00000574408 NUDT10Q8NFP7 164 aa8.16□□□□□ -1.1
USP43-205ENST00000574408 NUDT11Q96G61 164 aa8.16□□□□□ -1.1
USP43-205ENST00000574408 GNB4Q9HAV0 340 aa8.16□□□□□ -1.1
USP43-205ENST00000574408 LINC00527Q9UJ94 153 aa8.16□□□□□ -1.1
USP43-205ENST00000574408 FMC1Q96HJ9 113 aa8.16□□□□□ -1.1
USP43-205ENST00000574408 CLEC5AQ9NY25 188 aa8.16□□□□□ -1.1
USP43-205ENST00000574408 NAV2Q8IVL1 2488 aa8.16□□□□□ -1.1
USP43-205ENST00000574408 B4DSR2 109 aa8.16□□□□□ -1.1
USP43-205ENST00000574408 C16orf54Q6UWD8 224 aa8.16□□□□□ -1.1
USP43-205ENST00000574408 ZNF502Q8TBZ5 544 aa8.16□□□□□ -1.1
USP43-205ENST00000574408 MRPS12O15235 138 aaKnown RBP8.15□□□□□ -1.1
USP43-205ENST00000574408 AMY1AP04745 511 aa8.15□□□□□ -1.1
USP43-205ENST00000574408 DSCR9P59020 149 aa8.15□□□□□ -1.1
USP43-205ENST00000574408 SIGLEC15Q6ZMC9 328 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms