RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 CXCL1P09341 107 aa22.4■■□□□ 1.18
CTDNEP1-208ENST00000573600 SMAD5-AS1Q9Y6J3 95 aa22.4■■□□□ 1.18
CTDNEP1-208ENST00000573600 TGIF2-C20orf24A0A0A6YYL0 155 aa22.39■■□□□ 1.17
CTDNEP1-208ENST00000573600 KCNIP4Q6PIL6 250 aa22.39■■□□□ 1.17
CTDNEP1-208ENST00000573600 ARL6IP6Q8N6S5 226 aa22.39■■□□□ 1.17
CTDNEP1-208ENST00000573600 DUX5Q96PT3 197 aa22.39■■□□□ 1.17
CTDNEP1-208ENST00000573600 TMEM160Q9NX00 188 aa22.39■■□□□ 1.17
CTDNEP1-208ENST00000573600 MLXQ9UH92 298 aa22.39■■□□□ 1.17
CTDNEP1-208ENST00000573600 ERVFC1-1P60608 527 aa22.38■■□□□ 1.17
CTDNEP1-208ENST00000573600 ZNF469Q96JG9 3925 aaPredicted RBP22.38■■□□□ 1.17
CTDNEP1-208ENST00000573600 K7EQM0 130 aa22.37■■□□□ 1.17
CTDNEP1-208ENST00000573600 MGST1P10620 155 aaKnown RBP22.37■■□□□ 1.17
CTDNEP1-208ENST00000573600 OR5I1Q13606 314 aa22.37■■□□□ 1.17
CTDNEP1-208ENST00000573600 OSTCQ9NRP0 149 aa22.37■■□□□ 1.17
CTDNEP1-208ENST00000573600 ZNF785A8K8V0 405 aa22.37■■□□□ 1.17
CTDNEP1-208ENST00000573600 C10orf99Q6UWK7 81 aa22.37■■□□□ 1.17
CTDNEP1-208ENST00000573600 FAM210BQ96KR6 192 aa22.37■■□□□ 1.17
CTDNEP1-208ENST00000573600 FLNAP21333 2647 aaKnown RBP22.36■■□□□ 1.17
CTDNEP1-208ENST00000573600 ITPR2Q14571 2701 aa22.36■■□□□ 1.17
CTDNEP1-208ENST00000573600 ZNF207O43670 478 aaKnown RBP22.36■■□□□ 1.17
CTDNEP1-208ENST00000573600 MEOX2P50222 304 aa22.36■■□□□ 1.17
CTDNEP1-208ENST00000573600 PYGO2Q9BRQ0 406 aa22.36■■□□□ 1.17
CTDNEP1-208ENST00000573600 TRBV6-1A0A0K0K1D8 114 aa22.35■■□□□ 1.17
CTDNEP1-208ENST00000573600 DNAJC9-AS1A6NH13 148 aa22.35■■□□□ 1.17
CTDNEP1-208ENST00000573600 C1orf196B1AJZ1 125 aa22.35■■□□□ 1.17
CTDNEP1-208ENST00000573600 CSN1S1P47710 185 aa22.35■■□□□ 1.17
CTDNEP1-208ENST00000573600 GOLT1AQ6ZVE7 132 aa22.35■■□□□ 1.17
CTDNEP1-208ENST00000573600 RNF152Q8N8N0 203 aa22.35■■□□□ 1.17
CTDNEP1-208ENST00000573600 SERTM2A0A1B0GWG4 89 aa22.34■■□□□ 1.17
CTDNEP1-208ENST00000573600 APOHP02749 345 aaPredicted RBP22.34■■□□□ 1.17
CTDNEP1-208ENST00000573600 FOXL1Q12952 345 aa22.34■■□□□ 1.17
CTDNEP1-208ENST00000573600 UNQ9165/PRO28630Q6UXU0 137 aa22.34■■□□□ 1.17
CTDNEP1-208ENST00000573600 TMEM75Q8N9X5 138 aa22.34■■□□□ 1.17
CTDNEP1-208ENST00000573600 MYOZ3Q8TDC0 251 aa22.34■■□□□ 1.17
CTDNEP1-208ENST00000573600 LTAP01374 205 aa22.34■■□□□ 1.17
CTDNEP1-208ENST00000573600 RPLP1P05386 114 aaKnown RBP22.34■■□□□ 1.17
CTDNEP1-208ENST00000573600 RPS10P46783 165 aaKnown RBP22.34■■□□□ 1.17
CTDNEP1-208ENST00000573600 C1QL4Q86Z23 238 aa22.34■■□□□ 1.17
CTDNEP1-208ENST00000573600 BTF3L4Q96K17 158 aa22.34■■□□□ 1.17
CTDNEP1-208ENST00000573600 SERTAD4Q9NUC0 356 aa22.34■■□□□ 1.17
CTDNEP1-208ENST00000573600 DIRC3C9JPN6 131 aa22.33■■□□□ 1.17
CTDNEP1-208ENST00000573600 RAB5BP61020 215 aa22.33■■□□□ 1.17
CTDNEP1-208ENST00000573600 C16orf54Q6UWD8 224 aa22.33■■□□□ 1.17
CTDNEP1-208ENST00000573600 IGHV3-66A0A0C4DH42 116 aa22.32■■□□□ 1.16
CTDNEP1-208ENST00000573600 IBA57Q5T440 356 aaKnown RBP22.32■■□□□ 1.16
CTDNEP1-208ENST00000573600 NHLRC2Q8NBF2 726 aa22.32■■□□□ 1.16
CTDNEP1-208ENST00000573600 SLC50A1Q9BRV3 221 aa22.32■■□□□ 1.16
CTDNEP1-208ENST00000573600 ZNF331Q9NQX6 463 aaPredicted RBP22.32■■□□□ 1.16
CTDNEP1-208ENST00000573600 BIN3Q9NQY0 253 aa22.32■■□□□ 1.16
CTDNEP1-208ENST00000573600 A0A1W2PS18 150 aa22.31■■□□□ 1.16
CTDNEP1-208ENST00000573600 FLI1Q01543 452 aaPredicted RBP22.31■■□□□ 1.16
CTDNEP1-208ENST00000573600 FAM106AQ4KMX7 169 aa22.31■■□□□ 1.16
CTDNEP1-208ENST00000573600 FAM231DQ6ZW35 169 aa22.31■■□□□ 1.16
CTDNEP1-208ENST00000573600 GRAMD2BQ96HH9 432 aa22.31■■□□□ 1.16
CTDNEP1-208ENST00000573600 UBE2E2Q96LR5 201 aa22.31■■□□□ 1.16
CTDNEP1-208ENST00000573600 SGK494Q96LW2 274 aa22.31■■□□□ 1.16
CTDNEP1-208ENST00000573600 MLST8Q9BVC4 326 aa22.31■■□□□ 1.16
CTDNEP1-208ENST00000573600 IL36BQ9NZH7 164 aa22.31■■□□□ 1.16
CTDNEP1-208ENST00000573600 V9GYV3 84 aa22.31■■□□□ 1.16
CTDNEP1-208ENST00000573600 IGHV3OR16-13A0A075B7E8 117 aa22.31■■□□□ 1.16
CTDNEP1-208ENST00000573600 IGHV3-74A0A0B4J1X5 117 aa22.31■■□□□ 1.16
CTDNEP1-208ENST00000573600 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa22.31■■□□□ 1.16
CTDNEP1-208ENST00000573600 Q86TA4 180 aa22.31■■□□□ 1.16
CTDNEP1-208ENST00000573600 GPHB5Q86YW7 130 aa22.31■■□□□ 1.16
CTDNEP1-208ENST00000573600 IGHV3-49A0A0A0MS15 119 aa22.3■■□□□ 1.16
CTDNEP1-208ENST00000573600 A0A1W2PPQ1 181 aa22.3■■□□□ 1.16
CTDNEP1-208ENST00000573600 M0R3E3 92 aa22.3■■□□□ 1.16
CTDNEP1-208ENST00000573600 GLMPQ8WWB7 406 aa22.3■■□□□ 1.16
CTDNEP1-208ENST00000573600 RNASE7Q9H1E1 156 aaKnown RBP22.3■■□□□ 1.16
CTDNEP1-208ENST00000573600 ZNF320A2RRD8 509 aa22.29■■□□□ 1.16
CTDNEP1-208ENST00000573600 FAM181BA6NEQ2 426 aa22.29■■□□□ 1.16
CTDNEP1-208ENST00000573600 IGLV2-11P01706 119 aa22.29■■□□□ 1.16
CTDNEP1-208ENST00000573600 LGALS1P09382 135 aaKnown RBP22.29■■□□□ 1.16
CTDNEP1-208ENST00000573600 PSG3Q16557 428 aa22.29■■□□□ 1.16
CTDNEP1-208ENST00000573600 K7EMT4 169 aa22.28■■□□□ 1.16
CTDNEP1-208ENST00000573600 TRAV9-1A0A075B6T8 112 aa22.28■■□□□ 1.16
CTDNEP1-208ENST00000573600 TMEM183AQ8IXX5 376 aa22.28■■□□□ 1.16
CTDNEP1-208ENST00000573600 DAZ1Q9NQZ3 744 aaKnown RBP22.28■■□□□ 1.16
CTDNEP1-208ENST00000573600 ZFP30Q9Y2G7 519 aa22.28■■□□□ 1.16
CTDNEP1-208ENST00000573600 MXRA5Q9NR99 2828 aa22.27■■□□□ 1.16
CTDNEP1-208ENST00000573600 FBLL1A6NHQ2 334 aaKnown RBP22.27■■□□□ 1.16
CTDNEP1-208ENST00000573600 FAM3BP58499 235 aaPredicted RBP22.27■■□□□ 1.16
CTDNEP1-208ENST00000573600 RPEL1Q2QD12 228 aa22.27■■□□□ 1.16
CTDNEP1-208ENST00000573600 PRNTQ86SH4 94 aa22.27■■□□□ 1.16
CTDNEP1-208ENST00000573600 TRAV8-1A0A0A6YYK1 113 aa22.26■■□□□ 1.15
CTDNEP1-208ENST00000573600 LOC105371267A0A1B0GV96 52 aa22.26■■□□□ 1.15
CTDNEP1-208ENST00000573600 Q6ZSV7 163 aa22.26■■□□□ 1.15
CTDNEP1-208ENST00000573600 KLHDC1Q8N7A1 406 aa22.26■■□□□ 1.15
CTDNEP1-208ENST00000573600 SRD5A3Q9H8P0 318 aa22.26■■□□□ 1.15
CTDNEP1-208ENST00000573600 ESM1Q9NQ30 184 aa22.26■■□□□ 1.15
CTDNEP1-208ENST00000573600 PSG8Q9UQ74 426 aa22.26■■□□□ 1.15
CTDNEP1-208ENST00000573600 CLEC5AQ9NY25 188 aa22.26■■□□□ 1.15
CTDNEP1-208ENST00000573600 AKAP9Q99996 3911 aa22.25■■□□□ 1.15
CTDNEP1-208ENST00000573600 IGHV7-4-1A0A0J9YVY3 117 aa22.25■■□□□ 1.15
CTDNEP1-208ENST00000573600 ZNF492Q9P255 531 aa22.25■■□□□ 1.15
CTDNEP1-208ENST00000573600 UFC1Q9Y3C8 167 aa22.25■■□□□ 1.15
CTDNEP1-208ENST00000573600 TLN2Q9Y4G6 2542 aa22.24■■□□□ 1.15
CTDNEP1-208ENST00000573600 ZNF705GA8MUZ8 300 aaPredicted RBP22.24■■□□□ 1.15
CTDNEP1-208ENST00000573600 TYMSP04818 313 aa22.24■■□□□ 1.15
CTDNEP1-208ENST00000573600 CHEK1O14757 476 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms