RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 PSMG4Q5JS54 123 aa7.99□□□□□ -1.13
SMG6-213ENST00000573166 SOX21Q9Y651 276 aaPredicted RBP7.99□□□□□ -1.13
SMG6-213ENST00000573166 A8MWL6 223 aa7.98□□□□□ -1.13
SMG6-213ENST00000573166 PEX7O00628 323 aa7.98□□□□□ -1.13
SMG6-213ENST00000573166 RPLP1P05386 114 aaKnown RBP7.98□□□□□ -1.13
SMG6-213ENST00000573166 FOXL1Q12952 345 aa7.98□□□□□ -1.13
SMG6-213ENST00000573166 GTSCR1Q86UQ5 136 aa7.98□□□□□ -1.13
SMG6-213ENST00000573166 IBA57Q5T440 356 aaKnown RBP7.98□□□□□ -1.13
SMG6-213ENST00000573166 STHQ8IWL8 128 aa7.98□□□□□ -1.13
SMG6-213ENST00000573166 PRSS3P2Q8NHM4 247 aa7.98□□□□□ -1.13
SMG6-213ENST00000573166 SRD5A3Q9H8P0 318 aa7.98□□□□□ -1.13
SMG6-213ENST00000573166 PAM16Q9Y3D7 125 aa7.98□□□□□ -1.13
SMG6-213ENST00000573166 DNAJC9-AS1A6NH13 148 aa7.98□□□□□ -1.13
SMG6-213ENST00000573166 IER3P46695 156 aa7.98□□□□□ -1.13
SMG6-213ENST00000573166 YPEL3P61236 119 aaPredicted RBP7.98□□□□□ -1.13
SMG6-213ENST00000573166 PYY3Q5JQD4 70 aa7.98□□□□□ -1.13
SMG6-213ENST00000573166 SORL1Q92673 2214 aa7.98□□□□□ -1.13
SMG6-213ENST00000573166 SRP19P09132 144 aaKnown RBP7.98□□□□□ -1.13
SMG6-213ENST00000573166 MRPL54Q6P161 138 aaKnown RBP7.98□□□□□ -1.13
SMG6-213ENST00000573166 DUX3Q96PT4 197 aa7.98□□□□□ -1.13
SMG6-213ENST00000573166 FNDC4Q9H6D8 234 aaPredicted RBP7.98□□□□□ -1.13
SMG6-213ENST00000573166 OTORQ9NRC9 128 aa7.98□□□□□ -1.13
SMG6-213ENST00000573166 GOLT1BQ9Y3E0 138 aa7.98□□□□□ -1.13
SMG6-213ENST00000573166 SCO2A0A1W2PP80 73 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 A6NDX4 124 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 GCGP01275 180 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 STAG3L2P0CL84 134 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 STAG3L3P0CL85 134 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 RRN3P1Q2M238 152 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 CENPWQ5EE01 88 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 FAM159AQ6UWV7 190 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 LURAP1LQ8IV03 231 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 TMEM191AQ9H0A3 160 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 MEGF9Q9H1U4 602 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 A0A1W2PRE2 83 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 UBE2CO00762 179 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 GNG5P63218 68 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 CTAG1AP78358 180 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 ZNF506Q5JVG8 444 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 DMRT1Q9Y5R6 373 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 H3BUA1 57 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 M0R2Z0 102 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 NDUFA3O95167 84 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 IGLV2-23P01705 113 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 DDTP30046 118 aa7.97□□□□□ -1.13
SMG6-213ENST00000573166 A0A1B0GUS0 222 aa7.96□□□□□ -1.13
SMG6-213ENST00000573166 HIST1H2BKO60814 126 aa7.96□□□□□ -1.13
SMG6-213ENST00000573166 HIST1H2BJP06899 126 aa7.96□□□□□ -1.13
SMG6-213ENST00000573166 HIST1H2BOP23527 126 aa7.96□□□□□ -1.13
SMG6-213ENST00000573166 HIST1H2BBP33778 126 aa7.96□□□□□ -1.13
SMG6-213ENST00000573166 HIST1H2BDP58876 126 aa7.96□□□□□ -1.13
SMG6-213ENST00000573166 HIST1H2BCP62807 126 aa7.96□□□□□ -1.13
SMG6-213ENST00000573166 HIST2H2BEQ16778 126 aa7.96□□□□□ -1.13
SMG6-213ENST00000573166 DEFB136Q30KP8 78 aa7.96□□□□□ -1.13
SMG6-213ENST00000573166 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.96□□□□□ -1.13
SMG6-213ENST00000573166 HIST1H2BHQ93079 126 aa7.96□□□□□ -1.13
SMG6-213ENST00000573166 HIST1H2BNQ99877 126 aa7.96□□□□□ -1.13
SMG6-213ENST00000573166 HIST1H2BMQ99879 126 aa7.96□□□□□ -1.13
SMG6-213ENST00000573166 CHD6Q8TD26 2715 aa7.96□□□□□ -1.13
SMG6-213ENST00000573166 OVOL1O14753 267 aa7.96□□□□□ -1.14
SMG6-213ENST00000573166 IGHG2P01859 326 aa7.96□□□□□ -1.14
SMG6-213ENST00000573166 RIGQ13278 110 aa7.96□□□□□ -1.14
SMG6-213ENST00000573166 TSSC4Q9Y5U2 329 aaPredicted RBP7.96□□□□□ -1.14
SMG6-213ENST00000573166 IGSF10Q6WRI0 2623 aa7.96□□□□□ -1.14
SMG6-213ENST00000573166 OR5AL1P0C617 328 aa7.96□□□□□ -1.14
SMG6-213ENST00000573166 IGLC1P0CG04 106 aa7.96□□□□□ -1.14
SMG6-213ENST00000573166 IL15RAQ13261 267 aa7.96□□□□□ -1.14
SMG6-213ENST00000573166 C1orf229Q6ZS94 237 aaPredicted RBP7.96□□□□□ -1.14
SMG6-213ENST00000573166 EXOC3-AS1Q8N2X6 119 aa7.96□□□□□ -1.14
SMG6-213ENST00000573166 CIARTQ8N365 385 aaPredicted RBP7.96□□□□□ -1.14
SMG6-213ENST00000573166 MBD3L1Q8WWY6 194 aa7.96□□□□□ -1.14
SMG6-213ENST00000573166 MT-ND6P03923 174 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 C11orf42Q8N5U0 333 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 TMEM86BQ8N661 226 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 WFDC12Q8WWY7 111 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 SMR3AQ99954 134 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 EPDR1Q9UM22 224 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 DUSP14O95147 198 aaKnown RBP7.95□□□□□ -1.14
SMG6-213ENST00000573166 MGPP08493 103 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 TCTEX1D4Q5JR98 221 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 NDUFA4O00483 81 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 AVPP01185 164 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 FOXE3Q13461 319 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 Q6YL49 198 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 C8orf86Q6ZUL3 223 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 HAPLN4Q86UW8 402 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 CFHR4Q92496 578 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 ATG101Q9BSB4 218 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 PHLDA3Q9Y5J5 127 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 E7EUB6 86 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 IGFL4Q6B9Z1 124 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 SHANK2-AS3Q9BTD1 123 aa7.95□□□□□ -1.14
SMG6-213ENST00000573166 RAI1Q7Z5J4 1906 aaPredicted RBP7.94□□□□□ -1.14
SMG6-213ENST00000573166 VWC2LB2RUY7 222 aa7.94□□□□□ -1.14
SMG6-213ENST00000573166 DIRC3C9JPN6 131 aa7.94□□□□□ -1.14
SMG6-213ENST00000573166 C10orf91Q5T1B1 145 aa7.94□□□□□ -1.14
SMG6-213ENST00000573166 C9orf139Q6ZV77 190 aa7.94□□□□□ -1.14
SMG6-213ENST00000573166 HOXA5P20719 270 aa7.94□□□□□ -1.14
SMG6-213ENST00000573166 COL5A1-AS1Q5SY13 56 aa7.94□□□□□ -1.14
SMG6-213ENST00000573166 KLK15Q9H2R5 256 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms