RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 LCN15Q6UWW0 184 aa17.35■□□□□ 0.37
TVP23A-206ENST00000572980 H3BQ15 152 aa17.34■□□□□ 0.37
TVP23A-206ENST00000572980 SNRPCP09234 159 aaKnown RBP17.34■□□□□ 0.37
TVP23A-206ENST00000572980 PYYP10082 97 aa17.34■□□□□ 0.37
TVP23A-206ENST00000572980 DEFB131AP59861 70 aa17.34■□□□□ 0.37
TVP23A-206ENST00000572980 DEFB121Q5J5C9 76 aa17.34■□□□□ 0.37
TVP23A-206ENST00000572980 MRAPQ8TCY5 172 aa17.34■□□□□ 0.37
TVP23A-206ENST00000572980 TMED6Q8WW62 240 aa17.34■□□□□ 0.37
TVP23A-206ENST00000572980 RAB24Q969Q5 203 aa17.34■□□□□ 0.37
TVP23A-206ENST00000572980 PSMG4Q5JS54 123 aa17.33■□□□□ 0.37
TVP23A-206ENST00000572980 PQLC2Q6ZP29 291 aa17.33■□□□□ 0.37
TVP23A-206ENST00000572980 DEFB125Q8N687 156 aa17.33■□□□□ 0.37
TVP23A-206ENST00000572980 RNF141Q8WVD5 230 aa17.33■□□□□ 0.37
TVP23A-206ENST00000572980 TUBA4BQ9H853 241 aa17.33■□□□□ 0.37
TVP23A-206ENST00000572980 LINC00052Q96N35 136 aa17.32■□□□□ 0.36
TVP23A-206ENST00000572980 SLC50A1Q9BRV3 221 aa17.32■□□□□ 0.36
TVP23A-206ENST00000572980 WFDC10AQ9H1F0 79 aa17.32■□□□□ 0.36
TVP23A-206ENST00000572980 ZNF586Q9NXT0 402 aa17.32■□□□□ 0.36
TVP23A-206ENST00000572980 HMGB3O15347 200 aaKnown RBP17.32■□□□□ 0.36
TVP23A-206ENST00000572980 OR10J4P0C629 311 aa17.32■□□□□ 0.36
TVP23A-206ENST00000572980 NBEAP1P0C6P0 100 aa17.32■□□□□ 0.36
TVP23A-206ENST00000572980 IGHV4-30-4P0DP06 118 aa17.32■□□□□ 0.36
TVP23A-206ENST00000572980 APRG1Q8IVJ8 170 aa17.32■□□□□ 0.36
TVP23A-206ENST00000572980 TRBV19A0A075B6N1 114 aa17.31■□□□□ 0.36
TVP23A-206ENST00000572980 H3BTX0 84 aa17.31■□□□□ 0.36
TVP23A-206ENST00000572980 ZNF253O75346 499 aa17.31■□□□□ 0.36
TVP23A-206ENST00000572980 EIF3GO75821 320 aaKnown RBP eCLIP17.31■□□□□ 0.36
TVP23A-206ENST00000572980 STAG3L2P0CL84 134 aa17.31■□□□□ 0.36
TVP23A-206ENST00000572980 STAG3L3P0CL85 134 aa17.31■□□□□ 0.36
TVP23A-206ENST00000572980 UBE2L3P68036 154 aaKnown RBP17.31■□□□□ 0.36
TVP23A-206ENST00000572980 PDE6HQ13956 83 aa17.31■□□□□ 0.36
TVP23A-206ENST00000572980 FXYD5Q96DB9 178 aa17.31■□□□□ 0.36
TVP23A-206ENST00000572980 SAT2Q96F10 170 aaPredicted RBP17.31■□□□□ 0.36
TVP23A-206ENST00000572980 ZNF503Q96F45 646 aa17.31■□□□□ 0.36
TVP23A-206ENST00000572980 ZNF331Q9NQX6 463 aaPredicted RBP17.31■□□□□ 0.36
TVP23A-206ENST00000572980 CTXND1A0A1B0GTU2 59 aa17.3■□□□□ 0.36
TVP23A-206ENST00000572980 A8MZ25 164 aa17.3■□□□□ 0.36
TVP23A-206ENST00000572980 BLNKQ8WV28 456 aa17.3■□□□□ 0.36
TVP23A-206ENST00000572980 SRD5A3Q9H8P0 318 aa17.3■□□□□ 0.36
TVP23A-206ENST00000572980 CLEC5AQ9NY25 188 aa17.3■□□□□ 0.36
TVP23A-206ENST00000572980 BOLA1Q9Y3E2 137 aa17.3■□□□□ 0.36
TVP23A-206ENST00000572980 TRAV8-2A0A0B4J237 113 aa17.29■□□□□ 0.36
TVP23A-206ENST00000572980 BOLA2-SMG1P6H3BVE0 249 aa17.29■□□□□ 0.36
TVP23A-206ENST00000572980 DPPA3Q6W0C5 159 aa17.29■□□□□ 0.36
TVP23A-206ENST00000572980 CXorf1O96002 111 aa17.28■□□□□ 0.36
TVP23A-206ENST00000572980 ARL14EPLP0DKL9 152 aa17.28■□□□□ 0.36
TVP23A-206ENST00000572980 PSG9Q00887 426 aa17.28■□□□□ 0.36
TVP23A-206ENST00000572980 PLA2G2EQ9NZK7 142 aa17.28■□□□□ 0.36
TVP23A-206ENST00000572980 FBN3Q75N90 2809 aa17.28■□□□□ 0.36
TVP23A-206ENST00000572980 SLC17A3O00476 420 aa17.28■□□□□ 0.36
TVP23A-206ENST00000572980 RAB5CP51148 216 aa17.28■□□□□ 0.36
TVP23A-206ENST00000572980 ZNF726P1Q15940 193 aa17.28■□□□□ 0.36
TVP23A-206ENST00000572980 ZNF124Q15973 351 aa17.28■□□□□ 0.36
TVP23A-206ENST00000572980 IGFL4Q6B9Z1 124 aa17.28■□□□□ 0.36
TVP23A-206ENST00000572980 SSX7Q7RTT5 188 aa17.27■□□□□ 0.35
TVP23A-206ENST00000572980 RNF182Q8N6D2 247 aa17.27■□□□□ 0.35
TVP23A-206ENST00000572980 FAM213BQ8TBF2 198 aa17.27■□□□□ 0.35
TVP23A-206ENST00000572980 PHYHIPLQ96FC7 376 aa17.27■□□□□ 0.35
TVP23A-206ENST00000572980 CITED4Q96RK1 184 aa17.27■□□□□ 0.35
TVP23A-206ENST00000572980 MEGF8Q7Z7M0 2845 aa17.27■□□□□ 0.35
TVP23A-206ENST00000572980 NDUFB4O95168 129 aa17.26■□□□□ 0.35
TVP23A-206ENST00000572980 FHITP49789 147 aa17.26■□□□□ 0.35
TVP23A-206ENST00000572980 PSG3Q16557 428 aa17.26■□□□□ 0.35
TVP23A-206ENST00000572980 C20orf173Q96LM9 149 aa17.26■□□□□ 0.35
TVP23A-206ENST00000572980 AAMDCQ9H7C9 122 aa17.26■□□□□ 0.35
TVP23A-206ENST00000572980 ZNF738Q8NE65 137 aa17.25■□□□□ 0.35
TVP23A-206ENST00000572980 DNAH3Q8TD57 4116 aa17.25■□□□□ 0.35
TVP23A-206ENST00000572980 FRMD6-AS1P0C7T7 363 aa17.24■□□□□ 0.35
TVP23A-206ENST00000572980 GCHFRP30047 84 aa17.24■□□□□ 0.35
TVP23A-206ENST00000572980 SULT1A2P50226 295 aa17.24■□□□□ 0.35
TVP23A-206ENST00000572980 ACTL10Q5JWF8 245 aa17.24■□□□□ 0.35
TVP23A-206ENST00000572980 STHQ8IWL8 128 aa17.24■□□□□ 0.35
TVP23A-206ENST00000572980 LYPD1Q8N2G4 141 aa17.24■□□□□ 0.35
TVP23A-206ENST00000572980 TMEM167BQ9NRX6 74 aa17.24■□□□□ 0.35
TVP23A-206ENST00000572980 MAP1LC3B2A6NCE7 125 aa17.23■□□□□ 0.35
TVP23A-206ENST00000572980 KNCNA6PVL3 124 aa17.23■□□□□ 0.35
TVP23A-206ENST00000572980 HLA-DMBP28068 263 aa17.23■□□□□ 0.35
TVP23A-206ENST00000572980 EBLN2Q6P2I7 272 aa17.23■□□□□ 0.35
TVP23A-206ENST00000572980 FOXI2Q6ZQN5 318 aa17.23■□□□□ 0.35
TVP23A-206ENST00000572980 IQCF2Q8IXL9 164 aa17.23■□□□□ 0.35
TVP23A-206ENST00000572980 MAP1LC3BQ9GZQ8 125 aa17.23■□□□□ 0.35
TVP23A-206ENST00000572980 LOC102724200A0A096LPH7 203 aaPredicted RBP17.23■□□□□ 0.35
TVP23A-206ENST00000572980 RANP62826 216 aaKnown RBP17.23■□□□□ 0.35
TVP23A-206ENST00000572980 SAV1Q9H4B6 383 aaPredicted RBP17.23■□□□□ 0.35
TVP23A-206ENST00000572980 PRELID1Q9Y255 219 aa17.23■□□□□ 0.35
TVP23A-206ENST00000572980 RBMY1BA6NDE4 496 aaKnown RBP17.22■□□□□ 0.35
TVP23A-206ENST00000572980 RBMY1EA6NEQ0 496 aaKnown RBP17.22■□□□□ 0.35
TVP23A-206ENST00000572980 H2AFB1P0C5Y9 115 aa17.22■□□□□ 0.35
TVP23A-206ENST00000572980 RBMY1DP0C7P1 496 aaKnown RBP17.22■□□□□ 0.35
TVP23A-206ENST00000572980 SFT2D1Q8WV19 159 aa17.22■□□□□ 0.35
TVP23A-206ENST00000572980 MBD3L1Q8WWY6 194 aa17.22■□□□□ 0.35
TVP23A-206ENST00000572980 FGF8P55075 233 aaPredicted RBP17.21■□□□□ 0.35
TVP23A-206ENST00000572980 ALKAL2Q6UX46 152 aa17.21■□□□□ 0.35
TVP23A-206ENST00000572980 LINC00322Q6ZN03 302 aaPredicted RBP17.21■□□□□ 0.35
TVP23A-206ENST00000572980 EXOC3-AS1Q8N2X6 119 aa17.21■□□□□ 0.35
TVP23A-206ENST00000572980 SUN5Q8TC36 379 aa17.21■□□□□ 0.35
TVP23A-206ENST00000572980 RPUSD4Q96CM3 377 aaKnown RBP17.21■□□□□ 0.35
TVP23A-206ENST00000572980 MRPL53Q96EL3 112 aaKnown RBP17.21■□□□□ 0.35
TVP23A-206ENST00000572980 HLA-DRB4P13762 266 aa17.2■□□□□ 0.34
TVP23A-206ENST00000572980 ICAM4Q14773 271 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms