RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 DEFB1P60022 68 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 SELENOTP62341 195 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 RBMY1FQ15415 496 aaKnown RBP5.38□□□□□ -1.55
NUP88-205ENST00000572809 GDF5OSQ5U4N7 250 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 SAMD13Q5VXD3 122 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 SPATA31B1PQ5VZV4 182 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 MZT2BQ6NZ67 158 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 EBLN2Q6P2I7 272 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 GSG1LQ6UXU4 331 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 FOXI2Q6ZQN5 318 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 C12orf45Q8N5I9 185 aaPredicted RBP5.38□□□□□ -1.55
NUP88-205ENST00000572809 Q8NAQ8 132 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 OR4B1Q8NGF8 309 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 GPR82Q96P67 336 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 SEC22CQ9BRL7 303 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 NUDT15Q9NV35 164 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 XCL2Q9UBD3 114 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 TBC1D24Q9ULP9 559 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 HLA-DRB4X5D2U9 266 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 RYR3Q15413 4870 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 GOSR2O14653 212 aa5.37□□□□□ -1.55
NUP88-205ENST00000572809 HYPMO75409 117 aa5.37□□□□□ -1.55
NUP88-205ENST00000572809 DEDDO75618 318 aa5.37□□□□□ -1.55
NUP88-205ENST00000572809 OR5G3P0C626 314 aa5.37□□□□□ -1.55
NUP88-205ENST00000572809 LINC00869P0C866 280 aa5.37□□□□□ -1.55
NUP88-205ENST00000572809 PLP1P60201 277 aa5.37□□□□□ -1.55
NUP88-205ENST00000572809 ARL16Q0P5N6 197 aa5.37□□□□□ -1.55
NUP88-205ENST00000572809 Q6ZNX1 250 aa5.37□□□□□ -1.55
NUP88-205ENST00000572809 S100A7AQ86SG5 101 aa5.37□□□□□ -1.55
NUP88-205ENST00000572809 LINC00476Q8WZB0 136 aa5.37□□□□□ -1.55
NUP88-205ENST00000572809 C2orf50Q96LR7 162 aa5.37□□□□□ -1.55
NUP88-205ENST00000572809 C17orf77Q96MU5 243 aa5.37□□□□□ -1.55
NUP88-205ENST00000572809 GGACTQ9BVM4 153 aa5.37□□□□□ -1.55
NUP88-205ENST00000572809 SLC25A39Q9BZJ4 359 aaPredicted RBP5.37□□□□□ -1.55
NUP88-205ENST00000572809 ARL6Q9H0F7 186 aa5.37□□□□□ -1.55
NUP88-205ENST00000572809 HRH4Q9H3N8 390 aa5.37□□□□□ -1.55
NUP88-205ENST00000572809 RPRMQ9NS64 109 aa5.37□□□□□ -1.55
NUP88-205ENST00000572809 DOK5Q9P104 306 aa5.37□□□□□ -1.55
NUP88-205ENST00000572809 HIGD1AQ9Y241 93 aa5.37□□□□□ -1.55
NUP88-205ENST00000572809 RCL1Q9Y2P8 373 aaKnown RBP5.37□□□□□ -1.55
NUP88-205ENST00000572809 LSM5Q9Y4Y9 91 aaKnown RBP5.37□□□□□ -1.55
NUP88-205ENST00000572809 A0A0J9YX75 114 aa5.36□□□□□ -1.55
NUP88-205ENST00000572809 C11orf94C9JXX5 98 aa5.36□□□□□ -1.55
NUP88-205ENST00000572809 F6UB75 175 aa5.36□□□□□ -1.55
NUP88-205ENST00000572809 H3BRN7 92 aa5.36□□□□□ -1.55
NUP88-205ENST00000572809 K7EPK0 472 aa5.36□□□□□ -1.55
NUP88-205ENST00000572809 AGPAT2O15120 278 aa5.36□□□□□ -1.55
NUP88-205ENST00000572809 RPL7P18124 248 aaKnown RBP5.36□□□□□ -1.55
NUP88-205ENST00000572809 PVALBP20472 110 aaPredicted RBP5.36□□□□□ -1.55
NUP88-205ENST00000572809 BCAP31P51572 246 aa5.36□□□□□ -1.55
NUP88-205ENST00000572809 FXYD7P58549 80 aa5.36□□□□□ -1.55
NUP88-205ENST00000572809 PSG9Q00887 426 aa5.36□□□□□ -1.55
NUP88-205ENST00000572809 FGL1Q08830 312 aa5.36□□□□□ -1.55
NUP88-205ENST00000572809 FAM78BQ5VT40 261 aa5.36□□□□□ -1.55
NUP88-205ENST00000572809 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.36□□□□□ -1.55
NUP88-205ENST00000572809 PATE2Q6UY27 113 aa5.36□□□□□ -1.55
NUP88-205ENST00000572809 C2CD4CQ8TF44 421 aa5.36□□□□□ -1.55
NUP88-205ENST00000572809 SHANK2-AS3Q9BTD1 123 aa5.36□□□□□ -1.55
NUP88-205ENST00000572809 SCRT1Q9BWW7 348 aa5.36□□□□□ -1.55
NUP88-205ENST00000572809 ARV1Q9H2C2 271 aa5.36□□□□□ -1.55
NUP88-205ENST00000572809 RNF24Q9Y225 148 aa5.36□□□□□ -1.55
NUP88-205ENST00000572809 STARD9Q9P2P6 4700 aa5.36□□□□□ -1.55
NUP88-205ENST00000572809 IGHV3OR16-12A0A075B7B8 117 aa5.35□□□□□ -1.55
NUP88-205ENST00000572809 FAM24AA6NFZ4 105 aa5.35□□□□□ -1.55
NUP88-205ENST00000572809 SMIM9A6NGZ8 99 aa5.35□□□□□ -1.55
NUP88-205ENST00000572809 IGLL5B9A064 214 aa5.35□□□□□ -1.55
NUP88-205ENST00000572809 NPSP0C0P6 89 aa5.35□□□□□ -1.55
NUP88-205ENST00000572809 HLA-DMBP28068 263 aa5.35□□□□□ -1.55
NUP88-205ENST00000572809 CAV2P51636 162 aa5.35□□□□□ -1.55
NUP88-205ENST00000572809 TCTAP57738 103 aa5.35□□□□□ -1.55
NUP88-205ENST00000572809 SLC38A11Q08AI6 406 aa5.35□□□□□ -1.55
NUP88-205ENST00000572809 IL15RAQ13261 267 aa5.35□□□□□ -1.55
NUP88-205ENST00000572809 ASAH1Q13510 395 aa5.35□□□□□ -1.55
NUP88-205ENST00000572809 RAB31Q13636 194 aa5.35□□□□□ -1.55
NUP88-205ENST00000572809 PXDC1Q5TGL8 231 aa5.35□□□□□ -1.55
NUP88-205ENST00000572809 IGFL4Q6B9Z1 124 aa5.35□□□□□ -1.55
NUP88-205ENST00000572809 ZNF705AQ6ZN79 300 aaPredicted RBP5.35□□□□□ -1.55
NUP88-205ENST00000572809 LRRC20Q8TCA0 184 aa5.35□□□□□ -1.55
NUP88-205ENST00000572809 UHRF2Q96PU4 802 aa5.35□□□□□ -1.55
NUP88-205ENST00000572809 SLC35B3Q9H1N7 401 aa5.35□□□□□ -1.55
NUP88-205ENST00000572809 C11orf1Q9H5F2 150 aa5.35□□□□□ -1.55
NUP88-205ENST00000572809 GPN1Q9HCN4 374 aaPredicted RBP5.35□□□□□ -1.55
NUP88-205ENST00000572809 LYSTQ99698 3801 aa5.35□□□□□ -1.55
NUP88-205ENST00000572809 TRAV8-2A0A0B4J237 113 aa5.34□□□□□ -1.55
NUP88-205ENST00000572809 TRAV10A0A0B4J240 114 aa5.34□□□□□ -1.55
NUP88-205ENST00000572809 ZNF705FA8MVS1 300 aaPredicted RBP5.34□□□□□ -1.55
NUP88-205ENST00000572809 UPK1BO75841 260 aa5.34□□□□□ -1.55
NUP88-205ENST00000572809 CST7O76096 145 aa5.34□□□□□ -1.55
NUP88-205ENST00000572809 DUSP14O95147 198 aaKnown RBP5.34□□□□□ -1.55
NUP88-205ENST00000572809 ZNF705DP0CH99 300 aaPredicted RBP5.34□□□□□ -1.55
NUP88-205ENST00000572809 ZNF705BP0CI00 300 aaPredicted RBP5.34□□□□□ -1.55
NUP88-205ENST00000572809 S100A11P31949 105 aa5.34□□□□□ -1.55
NUP88-205ENST00000572809 CAMLGP49069 296 aa5.34□□□□□ -1.55
NUP88-205ENST00000572809 S100A10P60903 97 aa5.34□□□□□ -1.55
NUP88-205ENST00000572809 LGALS9CQ6DKI2 356 aa5.34□□□□□ -1.55
NUP88-205ENST00000572809 Q6ZRG5 221 aa5.34□□□□□ -1.55
NUP88-205ENST00000572809 LINC00305Q7Z4B0 112 aa5.34□□□□□ -1.55
NUP88-205ENST00000572809 ZNF546Q86UE3 836 aa5.34□□□□□ -1.55
NUP88-205ENST00000572809 C1orf158Q8N1D5 194 aa5.34□□□□□ -1.55
NUP88-205ENST00000572809 RNF182Q8N6D2 247 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms