RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 PARD6GQ9BYG4 376 aaPredicted RBP11.6□□□□□ -0.55
CHD3-215ENST00000572750 F6UB75 175 aa11.59□□□□□ -0.55
CHD3-215ENST00000572750 SLC17A3O00476 420 aa11.59□□□□□ -0.55
CHD3-215ENST00000572750 ARPC5O15511 151 aa11.59□□□□□ -0.55
CHD3-215ENST00000572750 IGLC2P0DOY2 106 aa11.59□□□□□ -0.55
CHD3-215ENST00000572750 PRB4P10163 310 aaPredicted RBP11.59□□□□□ -0.55
CHD3-215ENST00000572750 HLA-DRB4P13762 266 aa11.59□□□□□ -0.55
CHD3-215ENST00000572750 HLA-DMBP28068 263 aa11.59□□□□□ -0.55
CHD3-215ENST00000572750 ZNF266Q14584 549 aa11.59□□□□□ -0.55
CHD3-215ENST00000572750 MIR17HGQ75NE6 70 aa11.59□□□□□ -0.55
CHD3-215ENST00000572750 OVOL2Q9BRP0 275 aa11.59□□□□□ -0.55
CHD3-215ENST00000572750 CSTL1Q9H114 145 aa11.59□□□□□ -0.55
CHD3-215ENST00000572750 SAV1Q9H4B6 383 aaPredicted RBP11.59□□□□□ -0.55
CHD3-215ENST00000572750 HLA-DRB4X5D2U9 266 aa11.59□□□□□ -0.55
CHD3-215ENST00000572750 H3BMM0 161 aa11.58□□□□□ -0.56
CHD3-215ENST00000572750 H3BQ15 152 aa11.58□□□□□ -0.56
CHD3-215ENST00000572750 UBE2CO00762 179 aa11.58□□□□□ -0.56
CHD3-215ENST00000572750 IGKV3-20P01619 116 aa11.58□□□□□ -0.56
CHD3-215ENST00000572750 PYYP10082 97 aa11.58□□□□□ -0.56
CHD3-215ENST00000572750 LCN15Q6UWW0 184 aa11.58□□□□□ -0.56
CHD3-215ENST00000572750 FOXI2Q6ZQN5 318 aa11.58□□□□□ -0.56
CHD3-215ENST00000572750 Q6ZWC4 215 aa11.58□□□□□ -0.56
CHD3-215ENST00000572750 HSD17B11Q8NBQ5 300 aa11.58□□□□□ -0.56
CHD3-215ENST00000572750 LRRC20Q8TCA0 184 aa11.58□□□□□ -0.56
CHD3-215ENST00000572750 SLC25A2Q9BXI2 301 aa11.58□□□□□ -0.56
CHD3-215ENST00000572750 RPRMQ9NS64 109 aa11.58□□□□□ -0.56
CHD3-215ENST00000572750 C3orf84H3BNL1 204 aa11.57□□□□□ -0.56
CHD3-215ENST00000572750 SPRY2O43597 315 aa11.57□□□□□ -0.56
CHD3-215ENST00000572750 Q6ZNX1 250 aa11.57□□□□□ -0.56
CHD3-215ENST00000572750 ZNF738Q8NE65 137 aa11.57□□□□□ -0.56
CHD3-215ENST00000572750 HRH4Q9H3N8 390 aa11.57□□□□□ -0.56
CHD3-215ENST00000572750 hCG_2014768A0A024R1R8 64 aa11.56□□□□□ -0.56
CHD3-215ENST00000572750 EIF3GO75821 320 aaKnown RBP eCLIP11.56□□□□□ -0.56
CHD3-215ENST00000572750 GIG44P09565 113 aaPredicted RBP11.56□□□□□ -0.56
CHD3-215ENST00000572750 SPP1P10451 314 aa11.56□□□□□ -0.56
CHD3-215ENST00000572750 CXCL2P19875 107 aa11.56□□□□□ -0.56
CHD3-215ENST00000572750 CASC10Q5T4H9 136 aa11.56□□□□□ -0.56
CHD3-215ENST00000572750 RPL7L1Q6DKI1 246 aaKnown RBP11.56□□□□□ -0.56
CHD3-215ENST00000572750 RNF183Q96D59 192 aa11.56□□□□□ -0.56
CHD3-215ENST00000572750 FAM167A-AS1Q96KT0 104 aa11.56□□□□□ -0.56
CHD3-215ENST00000572750 MRPL32Q9BYC8 188 aaKnown RBP11.56□□□□□ -0.56
CHD3-215ENST00000572750 ZNF331Q9NQX6 463 aaPredicted RBP11.56□□□□□ -0.56
CHD3-215ENST00000572750 FUT9Q9Y231 359 aa11.56□□□□□ -0.56
CHD3-215ENST00000572750 TP53TG1Q9Y2A0 90 aa11.56□□□□□ -0.56
CHD3-215ENST00000572750 A0A0J9YX75 114 aa11.55□□□□□ -0.56
CHD3-215ENST00000572750 LCE6AA0A183 80 aa11.55□□□□□ -0.56
CHD3-215ENST00000572750 ZNF705DP0CH99 300 aaPredicted RBP11.55□□□□□ -0.56
CHD3-215ENST00000572750 ZNF705BP0CI00 300 aaPredicted RBP11.55□□□□□ -0.56
CHD3-215ENST00000572750 RAB2AP61019 212 aa11.55□□□□□ -0.56
CHD3-215ENST00000572750 EBLN2Q6P2I7 272 aa11.55□□□□□ -0.56
CHD3-215ENST00000572750 MORN3Q6PF18 240 aaPredicted RBP11.55□□□□□ -0.56
CHD3-215ENST00000572750 OR11H4Q8NGC9 324 aa11.55□□□□□ -0.56
CHD3-215ENST00000572750 OR4B1Q8NGF8 309 aa11.55□□□□□ -0.56
CHD3-215ENST00000572750 SLC50A1Q9BRV3 221 aa11.55□□□□□ -0.56
CHD3-215ENST00000572750 SH3BGRL3Q9H299 93 aa11.55□□□□□ -0.56
CHD3-215ENST00000572750 EDA2RQ9HAV5 297 aa11.55□□□□□ -0.56
CHD3-215ENST00000572750 ZNF586Q9NXT0 402 aa11.55□□□□□ -0.56
CHD3-215ENST00000572750 CLEC5AQ9NY25 188 aa11.55□□□□□ -0.56
CHD3-215ENST00000572750 TMEM14CQ9P0S9 112 aa11.55□□□□□ -0.56
CHD3-215ENST00000572750 TIMM9Q9Y5J7 89 aa11.55□□□□□ -0.56
CHD3-215ENST00000572750 ATP6V0CP27449 155 aa11.54□□□□□ -0.56
CHD3-215ENST00000572750 FXYD7P58549 80 aa11.54□□□□□ -0.56
CHD3-215ENST00000572750 MFFQ9GZY8 342 aa11.54□□□□□ -0.56
CHD3-215ENST00000572750 TRBV19A0A075B6N1 114 aa11.53□□□□□ -0.56
CHD3-215ENST00000572750 OR7C2O60412 319 aa11.53□□□□□ -0.56
CHD3-215ENST00000572750 OR10J4P0C629 311 aa11.53□□□□□ -0.56
CHD3-215ENST00000572750 RHOBP62745 196 aa11.53□□□□□ -0.56
CHD3-215ENST00000572750 PSG3Q16557 428 aa11.53□□□□□ -0.56
CHD3-215ENST00000572750 GUK1Q16774 197 aa11.53□□□□□ -0.56
CHD3-215ENST00000572750 ACOT6Q3I5F7 207 aaPredicted RBP11.53□□□□□ -0.56
CHD3-215ENST00000572750 BLNKQ8WV28 456 aa11.53□□□□□ -0.56
CHD3-215ENST00000572750 SAT2Q96F10 170 aaPredicted RBP11.53□□□□□ -0.56
CHD3-215ENST00000572750 PSMG3Q9BT73 122 aaPredicted RBP11.53□□□□□ -0.56
CHD3-215ENST00000572750 SLC35B3Q9H1N7 401 aa11.53□□□□□ -0.56
CHD3-215ENST00000572750 BORCS7-ASMTA0A0B4J1R7 106 aa11.52□□□□□ -0.57
CHD3-215ENST00000572750 ZNF705FA8MVS1 300 aaPredicted RBP11.52□□□□□ -0.57
CHD3-215ENST00000572750 HIST1H1EP10412 219 aaKnown RBP11.52□□□□□ -0.57
CHD3-215ENST00000572750 M6PRP20645 277 aa11.52□□□□□ -0.57
CHD3-215ENST00000572750 CNN1P51911 297 aaKnown RBP11.52□□□□□ -0.57
CHD3-215ENST00000572750 HIST1H1AQ02539 215 aaPredicted RBP11.52□□□□□ -0.57
CHD3-215ENST00000572750 FAM122CQ6P4D5 195 aa11.52□□□□□ -0.57
CHD3-215ENST00000572750 OR2G3Q8NGZ4 309 aa11.52□□□□□ -0.57
CHD3-215ENST00000572750 RPUSD4Q96CM3 377 aaKnown RBP11.52□□□□□ -0.57
CHD3-215ENST00000572750 FXYD5Q96DB9 178 aa11.52□□□□□ -0.57
CHD3-215ENST00000572750 ST6GAL2Q96JF0 529 aa11.52□□□□□ -0.57
CHD3-215ENST00000572750 PAXXQ9BUH6 204 aa11.52□□□□□ -0.57
CHD3-215ENST00000572750 OR51M1Q9H341 326 aa11.52□□□□□ -0.57
CHD3-215ENST00000572750 XCL2Q9UBD3 114 aa11.52□□□□□ -0.57
CHD3-215ENST00000572750 NDUFB4O95168 129 aa11.51□□□□□ -0.57
CHD3-215ENST00000572750 NUTF2P61970 127 aaKnown RBP11.51□□□□□ -0.57
CHD3-215ENST00000572750 UBE2L3P68036 154 aaKnown RBP11.51□□□□□ -0.57
CHD3-215ENST00000572750 ZNF345Q14585 488 aa11.51□□□□□ -0.57
CHD3-215ENST00000572750 KHDC3LQ587J8 217 aa11.51□□□□□ -0.57
CHD3-215ENST00000572750 OR8A1Q8NGG7 326 aa11.51□□□□□ -0.57
CHD3-215ENST00000572750 OR11H2Q8NH07 326 aa11.51□□□□□ -0.57
CHD3-215ENST00000572750 ZNF503Q96F45 646 aa11.51□□□□□ -0.57
CHD3-215ENST00000572750 A0A0J9YWU9 116 aa11.5□□□□□ -0.57
CHD3-215ENST00000572750 HMSDA8MTL9 139 aa11.5□□□□□ -0.57
CHD3-215ENST00000572750 PRAC2D3DTV9 90 aa11.5□□□□□ -0.57
CHD3-215ENST00000572750 HMGB3O15347 200 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms