RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 NXPH3O95157 252 aa7.75□□□□□ -1.17
VPS53-207ENST00000570510 IL4P05112 153 aa7.75□□□□□ -1.17
VPS53-207ENST00000570510 IAPPP10997 89 aa7.75□□□□□ -1.17
VPS53-207ENST00000570510 PLP1P60201 277 aa7.75□□□□□ -1.17
VPS53-207ENST00000570510 POLR2GP62487 172 aaKnown RBP eCLIP7.75□□□□□ -1.17
VPS53-207ENST00000570510 IL15RAQ13261 267 aa7.75□□□□□ -1.17
VPS53-207ENST00000570510 BPIFCQ8NFQ6 507 aa7.75□□□□□ -1.17
VPS53-207ENST00000570510 CHAC2Q8WUX2 184 aa7.75□□□□□ -1.17
VPS53-207ENST00000570510 ZNF503Q96F45 646 aa7.75□□□□□ -1.17
VPS53-207ENST00000570510 IGKV1D-37A0A075B6S9 117 aa7.74□□□□□ -1.17
VPS53-207ENST00000570510 C5orf51A6NDU8 294 aa7.74□□□□□ -1.17
VPS53-207ENST00000570510 PMS2P5A8MQ11 134 aa7.74□□□□□ -1.17
VPS53-207ENST00000570510 INMT-MINDY4F8WBC2 141 aa7.74□□□□□ -1.17
VPS53-207ENST00000570510 L7N2F9 121 aa7.74□□□□□ -1.17
VPS53-207ENST00000570510 MBPP02686 304 aaPredicted RBP7.74□□□□□ -1.17
VPS53-207ENST00000570510 MEOX2P50222 304 aa7.74□□□□□ -1.17
VPS53-207ENST00000570510 PAX9P55771 341 aa7.74□□□□□ -1.17
VPS53-207ENST00000570510 VAMP2P63027 116 aa7.74□□□□□ -1.17
VPS53-207ENST00000570510 ICAM4Q14773 271 aa7.74□□□□□ -1.17
VPS53-207ENST00000570510 SPATA31B1PQ5VZV4 182 aa7.74□□□□□ -1.17
VPS53-207ENST00000570510 CDPF1Q6NVV7 123 aa7.74□□□□□ -1.17
VPS53-207ENST00000570510 GLMPQ8WWB7 406 aa7.74□□□□□ -1.17
VPS53-207ENST00000570510 LINC00052Q96N35 136 aa7.74□□□□□ -1.17
VPS53-207ENST00000570510 NMES1Q9C002 83 aa7.74□□□□□ -1.17
VPS53-207ENST00000570510 Q9H3A6 140 aa7.74□□□□□ -1.17
VPS53-207ENST00000570510 NRN1Q9NPD7 142 aa7.74□□□□□ -1.17
VPS53-207ENST00000570510 GSKIPQ9P0R6 139 aa7.74□□□□□ -1.17
VPS53-207ENST00000570510 MGAT4CQ9UBM8 478 aa7.74□□□□□ -1.17
VPS53-207ENST00000570510 RCL1Q9Y2P8 373 aaKnown RBP7.74□□□□□ -1.17
VPS53-207ENST00000570510 A0A1W2PPQ1 181 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 C7orf66A4D0T2 115 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 LYRM9A8MSI8 78 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 SSSCA1O60232 199 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 PTTG1O95997 202 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 RLN2P04090 185 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 ATP5G1P05496 136 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 S100A11P31949 105 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 FUSP35637 526 aaKnown RBP eCLIP7.73□□□□□ -1.17
VPS53-207ENST00000570510 ID1P41134 155 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 ATP5G3P48201 142 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 ERVFC1-1P60608 527 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 HBG1P69891 147 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 HBG2P69892 147 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 IFITM3Q01628 133 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 RAB31Q13636 194 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 ATP6V1FQ16864 119 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 TEPPQ6URK8 271 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 SIGLEC15Q6ZMC9 328 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 NRARPQ7Z6K4 114 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 ASB13Q8WXK3 278 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 CLUHP3Q96NS8 147 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 ZNF586Q9NXT0 402 aa7.73□□□□□ -1.17
VPS53-207ENST00000570510 IGKV1OR2-108A0A075B7D4 117 aa7.72□□□□□ -1.17
VPS53-207ENST00000570510 MPDU1O75352 247 aa7.72□□□□□ -1.17
VPS53-207ENST00000570510 PET100P0DJ07 73 aa7.72□□□□□ -1.17
VPS53-207ENST00000570510 PSG9Q00887 426 aa7.72□□□□□ -1.17
VPS53-207ENST00000570510 AKR1C1Q04828 323 aa7.72□□□□□ -1.17
VPS53-207ENST00000570510 EBLN2Q6P2I7 272 aa7.72□□□□□ -1.17
VPS53-207ENST00000570510 ACOT7LQ6ZUV0 252 aa7.72□□□□□ -1.17
VPS53-207ENST00000570510 ZNF546Q86UE3 836 aa7.72□□□□□ -1.17
VPS53-207ENST00000570510 SEC22CQ9BRL7 303 aa7.72□□□□□ -1.17
VPS53-207ENST00000570510 C11orf1Q9H5F2 150 aa7.72□□□□□ -1.17
VPS53-207ENST00000570510 LYRM2Q9NU23 88 aaPredicted RBP7.72□□□□□ -1.17
VPS53-207ENST00000570510 PAIP2BQ9ULR5 123 aaKnown RBP7.72□□□□□ -1.17
VPS53-207ENST00000570510 SULT1A1P50225 295 aa7.71□□□□□ -1.18
VPS53-207ENST00000570510 ZNF90Q03938 601 aa7.71□□□□□ -1.18
VPS53-207ENST00000570510 BAXQ07812 192 aa7.71□□□□□ -1.18
VPS53-207ENST00000570510 VWC2Q2TAL6 325 aa7.71□□□□□ -1.18
VPS53-207ENST00000570510 GDF5OSQ5U4N7 250 aa7.71□□□□□ -1.18
VPS53-207ENST00000570510 FOXI2Q6ZQN5 318 aa7.71□□□□□ -1.18
VPS53-207ENST00000570510 CYP2G1PQ6ZSU1 146 aa7.71□□□□□ -1.18
VPS53-207ENST00000570510 STX12Q86Y82 276 aa7.71□□□□□ -1.18
VPS53-207ENST00000570510 OR1B1Q8NGR6 318 aa7.71□□□□□ -1.18
VPS53-207ENST00000570510 RNF141Q8WVD5 230 aa7.71□□□□□ -1.18
VPS53-207ENST00000570510 UHRF2Q96PU4 802 aa7.71□□□□□ -1.18
VPS53-207ENST00000570510 KRTAP1-5Q9BYS1 174 aa7.71□□□□□ -1.18
VPS53-207ENST00000570510 SLC25A31Q9H0C2 315 aa7.71□□□□□ -1.18
VPS53-207ENST00000570510 SLC35B3Q9H1N7 401 aa7.71□□□□□ -1.18
VPS53-207ENST00000570510 SAV1Q9H4B6 383 aaPredicted RBP7.71□□□□□ -1.18
VPS53-207ENST00000570510 FAM25EA8MYX2 175 aa7.7□□□□□ -1.18
VPS53-207ENST00000570510 E5RGE8 158 aa7.7□□□□□ -1.18
VPS53-207ENST00000570510 ISLRO14498 428 aa7.7□□□□□ -1.18
VPS53-207ENST00000570510 SCGB1D2O95969 90 aa7.7□□□□□ -1.18
VPS53-207ENST00000570510 METTL15P1P0C7V9 234 aa7.7□□□□□ -1.18
VPS53-207ENST00000570510 GALR1P47211 349 aa7.7□□□□□ -1.18
VPS53-207ENST00000570510 PSMB3P49720 205 aa7.7□□□□□ -1.18
VPS53-207ENST00000570510 RAP2BP61225 183 aa7.7□□□□□ -1.18
VPS53-207ENST00000570510 OR5I1Q13606 314 aa7.7□□□□□ -1.18
VPS53-207ENST00000570510 C1orf158Q8N1D5 194 aa7.7□□□□□ -1.18
VPS53-207ENST00000570510 ZNF709Q8N972 641 aa7.7□□□□□ -1.18
VPS53-207ENST00000570510 GNPNAT1Q96EK6 184 aaPredicted RBP7.7□□□□□ -1.18
VPS53-207ENST00000570510 TMEM147Q9BVK8 224 aa7.7□□□□□ -1.18
VPS53-207ENST00000570510 CBY3A6NI87 242 aa7.69□□□□□ -1.18
VPS53-207ENST00000570510 ZNF98A6NK75 572 aa7.69□□□□□ -1.18
VPS53-207ENST00000570510 H3BP45 60 aa7.69□□□□□ -1.18
VPS53-207ENST00000570510 HYPMO75409 117 aa7.69□□□□□ -1.18
VPS53-207ENST00000570510 RPL7P18124 248 aaKnown RBP7.69□□□□□ -1.18
VPS53-207ENST00000570510 CXCL2P19875 107 aa7.69□□□□□ -1.18
VPS53-207ENST00000570510 CAV2P51636 162 aa7.69□□□□□ -1.18
VPS53-207ENST00000570510 LINC00315P59091 139 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms