RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-217	ENST00000569429	RFX2	P48378	723 aa		4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429	LINC01547	P58512	204 aa	Predicted RBP	4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429	FXYD4	P59646	89 aa		4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429	YPEL3	P61236	119 aa	Predicted RBP	4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429	ERVK-16	P61578	105 aa		4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429	ERH	P84090	104 aa	Known RBP	4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429	CATR1	Q13166	79 aa		4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429	GAMT	Q14353	236 aa		4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429		Q6ZNX1	250 aa		4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429	OR5AP2	Q8NGF4	316 aa		4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429	OR6F1	Q8NGZ6	308 aa		4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429	BLNK	Q8WV28	456 aa		4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429	C20orf144	Q9BQM9	153 aa		4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429	SSBP4	Q9BWG4	385 aa	Predicted RBP	4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429	MIXL1	Q9H2W2	232 aa		4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429	EHF	Q9NZC4	300 aa		4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429	RABL2B	Q9UNT1	228 aa		4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429	HHLA3	Q9XRX5	114 aa		4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.17	□□□□□ -1.74
HERPUD1-217	ENST00000569429	TRAV8-3	A0A0A6YYJ7	113 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	UPK1B	O75841	260 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	PTTG1	O95997	202 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	IL4	P05112	153 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	IGLC1	P0CG04	106 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	RCVRN	P35243	200 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	TIRAP	P58753	221 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	TAS2R46	P59540	309 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	HERV-K104	P61576	105 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	PRR4	Q16378	134 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	MLANA	Q16655	118 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	SCGB2B2	Q4G0G5	96 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	SPINK6	Q6UWN8	80 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	CCDC190	Q86UF4	302 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	TMEM17	Q86X19	198 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	SLC24A4	Q8NFF2	622 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	OR1S2	Q8NGQ3	325 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	OR52I2	Q8NH67	350 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	SECTM1	Q8WVN6	248 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	ST6GAL2	Q96JF0	529 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	ZNF2	Q9BSG1	426 aa	Predicted RBP	4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	MRPL32	Q9BYC8	188 aa	Known RBP	4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	CCL28	Q9NRJ3	127 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	COX11	Q9Y6N1	276 aa		4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	SYNE2	Q8WXH0	6885 aa	Known RBP	4.16	□□□□□ -1.74
HERPUD1-217	ENST00000569429	LINC00854	A0A1B0GVQ3	168 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	GABARAP	H6UMI1	98 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	RAB3D	O95716	219 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	TOMM40	O96008	361 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	PGAM2	P15259	253 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	S100G	P29377	79 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	HRH1	P35367	487 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	MEOX2	P50222	304 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	TAS2R19	P59542	299 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	MRPS10	P82664	201 aa	Known RBP	4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	CIRBP	Q14011	172 aa	Known RBP	4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	PSG3	Q16557	428 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	RNASE10	Q5GAN6	216 aa	Known RBP	4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	C1orf194	Q5T5A4	169 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	ATP6V0E2	Q8NHE4	81 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	GPX8	Q8TED1	209 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	TRIM63	Q969Q1	353 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	RAB24	Q969Q5	203 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	C8orf49	Q96NF6	230 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	SLC5A7	Q9GZV3	580 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	MCUB	Q9NWR8	336 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	FUT9	Q9Y231	359 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	KIF25-AS1	Q9Y6Z4	181 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429	SSPO	A2VEC9	5147 aa		4.15	□□□□□ -1.75
HERPUD1-217	ENST00000569429		A0A1B0GVG6	124 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	DISC1	C4P0D8	188 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	INS-IGF2	F8WCM5	200 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	CCS	O14618	274 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	PHOX2A	O14813	284 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	KRAS	P01116	189 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	PPY	P01298	95 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	CD3D	P04234	171 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	OR5AC1	P0C628	307 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	AKAIN1	P0CW23	69 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	BCAP31	P51572	246 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	SUPT4H1	P63272	117 aa	Known RBP	4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	OR2F1	Q13607	317 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	FHL2	Q14192	279 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	TRIQK	Q629K1	86 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	STEAP1B	Q6NZ63	245 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	MZT2B	Q6NZ67	158 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	LPCAT3	Q6P1A2	487 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	DHRS11	Q6UWP2	260 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	TOMM5	Q8N4H5	51 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	TMEM229B	Q8NBD8	167 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	IL22RA2	Q969J5	263 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	TXNDC17	Q9BRA2	123 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	MTFP1	Q9UDX5	166 aa		4.14	□□□□□ -1.75
HERPUD1-217	ENST00000569429	TRGV1	A0A0A0MS02	117 aa		4.13	□□□□□ -1.75
HERPUD1-217	ENST00000569429	TRAV8-6	A0A0B4J262	113 aa		4.13	□□□□□ -1.75
HERPUD1-217	ENST00000569429	CENPX	A8MT69	81 aa		4.13	□□□□□ -1.75
HERPUD1-217	ENST00000569429		E5RGE8	158 aa		4.13	□□□□□ -1.75
HERPUD1-217	ENST00000569429	IGHV3-30	P01768	117 aa		4.13	□□□□□ -1.75
HERPUD1-217	ENST00000569429	IGHV3-33	P01772	117 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms