RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 A0A087X0K7 114 aa6.34□□□□□ -1.39
SF3B3-212ENST00000568539 CTXND1A0A1B0GTU2 59 aa6.34□□□□□ -1.39
SF3B3-212ENST00000568539 ZNF785A8K8V0 405 aa6.34□□□□□ -1.39
SF3B3-212ENST00000568539 H3BQ15 152 aa6.34□□□□□ -1.39
SF3B3-212ENST00000568539 OR7C2O60412 319 aa6.34□□□□□ -1.39
SF3B3-212ENST00000568539 PYYP10082 97 aa6.34□□□□□ -1.39
SF3B3-212ENST00000568539 RPL11P62913 178 aaKnown RBP6.34□□□□□ -1.39
SF3B3-212ENST00000568539 PQLC2Q6ZP29 291 aa6.34□□□□□ -1.39
SF3B3-212ENST00000568539 ZNF680Q8NEM1 530 aa6.34□□□□□ -1.39
SF3B3-212ENST00000568539 DCANP1Q8TF63 244 aa6.34□□□□□ -1.39
SF3B3-212ENST00000568539 MBD3L1Q8WWY6 194 aa6.34□□□□□ -1.39
SF3B3-212ENST00000568539 FXYD5Q96DB9 178 aa6.34□□□□□ -1.39
SF3B3-212ENST00000568539 SPAG8Q99932 426 aaPredicted RBP6.34□□□□□ -1.39
SF3B3-212ENST00000568539 PAXXQ9BUH6 204 aa6.34□□□□□ -1.39
SF3B3-212ENST00000568539 MS4A6AQ9H2W1 248 aa6.34□□□□□ -1.39
SF3B3-212ENST00000568539 OR51M1Q9H341 326 aa6.34□□□□□ -1.39
SF3B3-212ENST00000568539 HRH4Q9H3N8 390 aa6.34□□□□□ -1.39
SF3B3-212ENST00000568539 NRN1Q9NPD7 142 aa6.34□□□□□ -1.39
SF3B3-212ENST00000568539 VWFP04275 2813 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 TRBV19A0A075B6N1 114 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 TRAV2A0A0B4J234 112 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 MAP1LC3B2A6NCE7 125 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 G3V4G9 280 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 K7EQG2 157 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 SOCS3O14543 225 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 CXorf1O96002 111 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 SNRPCP09234 159 aaKnown RBP6.33□□□□□ -1.4
SF3B3-212ENST00000568539 H2AFB1P0C5Y9 115 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 OR10J4P0C629 311 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 ARL14EPLP0DKL9 152 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 HIST1H1EP10412 219 aaKnown RBP6.33□□□□□ -1.4
SF3B3-212ENST00000568539 UBE2L3P68036 154 aaKnown RBP6.33□□□□□ -1.4
SF3B3-212ENST00000568539 IFITM2Q01629 132 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 EGFEM1PQ0D2K5 195 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 GUCA2BQ16661 112 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 GUK1Q16774 197 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 BEAN1Q3B7T3 259 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 LCN15Q6UWW0 184 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 GBGT1Q8N5D6 347 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 SFT2D1Q8WV19 159 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 MAP1LC3BQ9GZQ8 125 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 ZNF586Q9NXT0 402 aa6.33□□□□□ -1.4
SF3B3-212ENST00000568539 ZNF256Q9Y2P7 627 aaPredicted RBP6.33□□□□□ -1.4
SF3B3-212ENST00000568539 TRAV1-1A0A0B4J248 108 aa6.32□□□□□ -1.4
SF3B3-212ENST00000568539 OR4C46A6NHA9 309 aa6.32□□□□□ -1.4
SF3B3-212ENST00000568539 ZNF705EA8MWA4 302 aaPredicted RBP6.32□□□□□ -1.4
SF3B3-212ENST00000568539 H3BTX0 84 aa6.32□□□□□ -1.4
SF3B3-212ENST00000568539 DNASE2O00115 360 aaPredicted RBP6.32□□□□□ -1.4
SF3B3-212ENST00000568539 SLC17A3O00476 420 aa6.32□□□□□ -1.4
SF3B3-212ENST00000568539 NDUFB4O95168 129 aa6.32□□□□□ -1.4
SF3B3-212ENST00000568539 IFNA7P01567 189 aa6.32□□□□□ -1.4
SF3B3-212ENST00000568539 NBEAP1P0C6P0 100 aa6.32□□□□□ -1.4
SF3B3-212ENST00000568539 GCHFRP30047 84 aa6.32□□□□□ -1.4
SF3B3-212ENST00000568539 TFPI2P48307 235 aa6.32□□□□□ -1.4
SF3B3-212ENST00000568539 MEOX2P50222 304 aa6.32□□□□□ -1.4
SF3B3-212ENST00000568539 FGF8P55075 233 aaPredicted RBP6.32□□□□□ -1.4
SF3B3-212ENST00000568539 PAFAH1B2P68402 229 aa6.32□□□□□ -1.4
SF3B3-212ENST00000568539 C21orf62-AS1Q17RA5 79 aa6.32□□□□□ -1.4
SF3B3-212ENST00000568539 WFDC3Q8IUB2 231 aa6.32□□□□□ -1.4
SF3B3-212ENST00000568539 SUN5Q8TC36 379 aa6.32□□□□□ -1.4
SF3B3-212ENST00000568539 SAT2Q96F10 170 aaPredicted RBP6.32□□□□□ -1.4
SF3B3-212ENST00000568539 ZNF331Q9NQX6 463 aaPredicted RBP6.32□□□□□ -1.4
SF3B3-212ENST00000568539 TRAV8-2A0A0B4J237 113 aa6.31□□□□□ -1.4
SF3B3-212ENST00000568539 ISLRO14498 428 aa6.31□□□□□ -1.4
SF3B3-212ENST00000568539 ZNF253O75346 499 aa6.31□□□□□ -1.4
SF3B3-212ENST00000568539 PSMB3P49720 205 aa6.31□□□□□ -1.4
SF3B3-212ENST00000568539 KRTAP10-11P60412 298 aa6.31□□□□□ -1.4
SF3B3-212ENST00000568539 PDE6HQ13956 83 aa6.31□□□□□ -1.4
SF3B3-212ENST00000568539 KPRPQ5T749 579 aaPredicted RBP6.31□□□□□ -1.4
SF3B3-212ENST00000568539 SAMD13Q5VXD3 122 aa6.31□□□□□ -1.4
SF3B3-212ENST00000568539 FAM24BQ8N5W8 94 aa6.31□□□□□ -1.4
SF3B3-212ENST00000568539 LRRC20Q8TCA0 184 aa6.31□□□□□ -1.4
SF3B3-212ENST00000568539 BLNKQ8WV28 456 aa6.31□□□□□ -1.4
SF3B3-212ENST00000568539 SLC50A1Q9BRV3 221 aa6.31□□□□□ -1.4
SF3B3-212ENST00000568539 TMPRSS5Q9H3S3 457 aa6.31□□□□□ -1.4
SF3B3-212ENST00000568539 TMEM167BQ9NRX6 74 aa6.31□□□□□ -1.4
SF3B3-212ENST00000568539 UBQLN2Q9UHD9 624 aa6.31□□□□□ -1.4
SF3B3-212ENST00000568539 A0A1B0GV50 99 aa6.3□□□□□ -1.4
SF3B3-212ENST00000568539 HBE1P02100 147 aa6.3□□□□□ -1.4
SF3B3-212ENST00000568539 CD7P09564 240 aa6.3□□□□□ -1.4
SF3B3-212ENST00000568539 BLOC1S1P78537 153 aa6.3□□□□□ -1.4
SF3B3-212ENST00000568539 CCL20P78556 96 aa6.3□□□□□ -1.4
SF3B3-212ENST00000568539 ODF3L2Q3SX64 289 aa6.3□□□□□ -1.4
SF3B3-212ENST00000568539 IGFL4Q6B9Z1 124 aa6.3□□□□□ -1.4
SF3B3-212ENST00000568539 IQCF2Q8IXL9 164 aa6.3□□□□□ -1.4
SF3B3-212ENST00000568539 LYPD1Q8N2G4 141 aa6.3□□□□□ -1.4
SF3B3-212ENST00000568539 LYPD6BQ8NI32 183 aa6.3□□□□□ -1.4
SF3B3-212ENST00000568539 C16orf92Q96LL3 132 aa6.3□□□□□ -1.4
SF3B3-212ENST00000568539 ZMAT5Q9UDW3 170 aaKnown RBP6.3□□□□□ -1.4
SF3B3-212ENST00000568539 TEX46H3BTG2 121 aa6.29□□□□□ -1.4
SF3B3-212ENST00000568539 NMBP08949 121 aa6.29□□□□□ -1.4
SF3B3-212ENST00000568539 ZNF688P0C7X2 276 aa6.29□□□□□ -1.4
SF3B3-212ENST00000568539 HLA-DMBP28068 263 aa6.29□□□□□ -1.4
SF3B3-212ENST00000568539 ID1P41134 155 aa6.29□□□□□ -1.4
SF3B3-212ENST00000568539 CD81P60033 236 aa6.29□□□□□ -1.4
SF3B3-212ENST00000568539 SNRPD3P62318 126 aaKnown RBP6.29□□□□□ -1.4
SF3B3-212ENST00000568539 RANP62826 216 aaKnown RBP6.29□□□□□ -1.4
SF3B3-212ENST00000568539 PSG9Q00887 426 aa6.29□□□□□ -1.4
SF3B3-212ENST00000568539 PSMG4Q5JS54 123 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms