RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 IGKV2D-40P01614 121 aaPredicted RBP8.78□□□□□ -1
PALB2-206ENST00000568219 SP9P0CG40 484 aa8.78□□□□□ -1
PALB2-206ENST00000568219 ATP5IP56385 69 aaPredicted RBP8.78□□□□□ -1
PALB2-206ENST00000568219 C1orf229Q6ZS94 237 aaPredicted RBP8.78□□□□□ -1
PALB2-206ENST00000568219 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.78□□□□□ -1
PALB2-206ENST00000568219 FAM167A-AS1Q96KT0 104 aa8.78□□□□□ -1
PALB2-206ENST00000568219 C17orf77Q96MU5 243 aa8.78□□□□□ -1
PALB2-206ENST00000568219 TPSG1Q9NRR2 321 aa8.78□□□□□ -1
PALB2-206ENST00000568219 OR11H12B2RN74 326 aa8.78□□□□□ -1
PALB2-206ENST00000568219 E7EUB6 86 aa8.78□□□□□ -1
PALB2-206ENST00000568219 MGPP08493 103 aa8.78□□□□□ -1
PALB2-206ENST00000568219 RBPJQ06330 500 aa8.78□□□□□ -1
PALB2-206ENST00000568219 LOXL1Q08397 574 aaPredicted RBP8.78□□□□□ -1
PALB2-206ENST00000568219 FAM27E3Q08E93 113 aa8.78□□□□□ -1
PALB2-206ENST00000568219 FAM120AOSQ5T036 256 aa8.78□□□□□ -1
PALB2-206ENST00000568219 OR11H1Q8NG94 326 aa8.78□□□□□ -1
PALB2-206ENST00000568219 OR11H2Q8NH07 326 aa8.78□□□□□ -1
PALB2-206ENST00000568219 CHAC1Q9BUX1 264 aa8.78□□□□□ -1
PALB2-206ENST00000568219 OTORQ9NRC9 128 aa8.78□□□□□ -1
PALB2-206ENST00000568219 SIGLEC8Q9NYZ4 499 aa8.78□□□□□ -1
PALB2-206ENST00000568219 TRAV17A0A0B4J275 112 aa8.78□□□□□ -1
PALB2-206ENST00000568219 NEU4Q8WWR8 484 aaPredicted RBP8.78□□□□□ -1
PALB2-206ENST00000568219 VKORC1Q9BQB6 163 aa8.78□□□□□ -1
PALB2-206ENST00000568219 TMEM133Q9H2Q1 129 aa8.78□□□□□ -1
PALB2-206ENST00000568219 NCOR1P1Q9H4R4 102 aa8.78□□□□□ -1
PALB2-206ENST00000568219 BEX4Q9NWD9 120 aaPredicted RBP8.78□□□□□ -1
PALB2-206ENST00000568219 C9orf172C9J069 976 aa8.77□□□□□ -1.01
PALB2-206ENST00000568219 F5H697 171 aa8.77□□□□□ -1.01
PALB2-206ENST00000568219 WIPF2Q8TF74 440 aaPredicted RBP8.77□□□□□ -1.01
PALB2-206ENST00000568219 MRPL36Q9P0J6 103 aaKnown RBP8.77□□□□□ -1.01
PALB2-206ENST00000568219 VWC2LB2RUY7 222 aa8.77□□□□□ -1.01
PALB2-206ENST00000568219 G3V4G9 280 aa8.77□□□□□ -1.01
PALB2-206ENST00000568219 BMI1P35226 326 aa8.77□□□□□ -1.01
PALB2-206ENST00000568219 C8orf46Q8TAG6 207 aa8.77□□□□□ -1.01
PALB2-206ENST00000568219 SLC25A39Q9BZJ4 359 aaPredicted RBP8.77□□□□□ -1.01
PALB2-206ENST00000568219 NPFFR1Q9GZQ6 430 aa8.77□□□□□ -1.01
PALB2-206ENST00000568219 TRAV40A0A0B4J280 105 aa8.77□□□□□ -1.01
PALB2-206ENST00000568219 A0A1W2PPI3 338 aa8.77□□□□□ -1.01
PALB2-206ENST00000568219 Q86TA4 180 aa8.77□□□□□ -1.01
PALB2-206ENST00000568219 NGBQ9NPG2 151 aa8.77□□□□□ -1.01
PALB2-206ENST00000568219 IGKCP01834 107 aa8.76□□□□□ -1.01
PALB2-206ENST00000568219 MC5RP33032 325 aa8.76□□□□□ -1.01
PALB2-206ENST00000568219 C17orf58Q2M2W7 97 aa8.76□□□□□ -1.01
PALB2-206ENST00000568219 C8orf49Q96NF6 230 aa8.76□□□□□ -1.01
PALB2-206ENST00000568219 F2RL2O00254 374 aa8.76□□□□□ -1.01
PALB2-206ENST00000568219 ATP5G2Q06055 141 aa8.76□□□□□ -1.01
PALB2-206ENST00000568219 TNFRSF14Q92956 283 aa8.76□□□□□ -1.01
PALB2-206ENST00000568219 ATG2AQ2TAZ0 1938 aa8.76□□□□□ -1.01
PALB2-206ENST00000568219 FXYD2P54710 66 aa8.76□□□□□ -1.01
PALB2-206ENST00000568219 FDCSPQ8NFU4 85 aa8.76□□□□□ -1.01
PALB2-206ENST00000568219 C1orf159Q96HA4 380 aa8.76□□□□□ -1.01
PALB2-206ENST00000568219 ANXA2RQ3ZCQ2 193 aa8.75□□□□□ -1.01
PALB2-206ENST00000568219 JMJD8Q96S16 334 aa8.75□□□□□ -1.01
PALB2-206ENST00000568219 CPAMD8Q8IZJ3 1885 aa8.75□□□□□ -1.01
PALB2-206ENST00000568219 WDFY4Q6ZS81 3184 aa8.75□□□□□ -1.01
PALB2-206ENST00000568219 DPM2O94777 84 aa8.75□□□□□ -1.01
PALB2-206ENST00000568219 LTAP01374 205 aa8.75□□□□□ -1.01
PALB2-206ENST00000568219 SPINK8P0C7L1 97 aa8.75□□□□□ -1.01
PALB2-206ENST00000568219 GLRXP35754 106 aa8.75□□□□□ -1.01
PALB2-206ENST00000568219 CD300EQ496F6 205 aaPredicted RBP8.75□□□□□ -1.01
PALB2-206ENST00000568219 NDUFA4L2Q9NRX3 87 aa8.75□□□□□ -1.01
PALB2-206ENST00000568219 PRR33A8MZF0 331 aa8.75□□□□□ -1.01
PALB2-206ENST00000568219 PRSS46E5RG02 174 aa8.75□□□□□ -1.01
PALB2-206ENST00000568219 CNTFRP26992 372 aa8.75□□□□□ -1.01
PALB2-206ENST00000568219 LINC01545Q5VT33 79 aa8.75□□□□□ -1.01
PALB2-206ENST00000568219 TMEM75Q8N9X5 138 aa8.75□□□□□ -1.01
PALB2-206ENST00000568219 TMEM158Q8WZ71 300 aa8.75□□□□□ -1.01
PALB2-206ENST00000568219 CLUHP3Q96NS8 147 aa8.75□□□□□ -1.01
PALB2-206ENST00000568219 ATP6V0BQ99437 205 aa8.75□□□□□ -1.01
PALB2-206ENST00000568219 VGLL1Q99990 258 aa8.75□□□□□ -1.01
PALB2-206ENST00000568219 GEMIN7Q9H840 131 aaKnown RBP8.75□□□□□ -1.01
PALB2-206ENST00000568219 MBD6Q96DN6 1003 aa8.74□□□□□ -1.01
PALB2-206ENST00000568219 M0R381 172 aa8.74□□□□□ -1.01
PALB2-206ENST00000568219 CEACAM3P40198 252 aa8.74□□□□□ -1.01
PALB2-206ENST00000568219 TRIP6Q15654 476 aaKnown RBP8.74□□□□□ -1.01
PALB2-206ENST00000568219 ZFHX2Q9C0A1 2572 aaPredicted RBP8.74□□□□□ -1.01
PALB2-206ENST00000568219 TMEM8BA6NDV4 472 aa8.74□□□□□ -1.01
PALB2-206ENST00000568219 WISP2O76076 250 aa8.74□□□□□ -1.01
PALB2-206ENST00000568219 NPYP01303 97 aa8.74□□□□□ -1.01
PALB2-206ENST00000568219 LGALS7P47929 136 aa8.74□□□□□ -1.01
PALB2-206ENST00000568219 MUC22E2RYF6 1773 aaPredicted RBP8.74□□□□□ -1.01
PALB2-206ENST00000568219 TRANK1O15050 2925 aa8.74□□□□□ -1.01
PALB2-206ENST00000568219 NTN3O00634 580 aaPredicted RBP8.73□□□□□ -1.01
PALB2-206ENST00000568219 EMP1P54849 157 aa8.73□□□□□ -1.01
PALB2-206ENST00000568219 DSPP15924 2871 aaKnown RBP8.73□□□□□ -1.01
PALB2-206ENST00000568219 NPIPB6E9PJ23 425 aa8.73□□□□□ -1.01
PALB2-206ENST00000568219 MRPL51Q4U2R6 128 aaKnown RBP8.73□□□□□ -1.01
PALB2-206ENST00000568219 PSMB11A5LHX3 300 aa8.73□□□□□ -1.01
PALB2-206ENST00000568219 LYNX1G3V0Z9 82 aa8.73□□□□□ -1.01
PALB2-206ENST00000568219 LYNX1P0DP58 116 aa8.73□□□□□ -1.01
PALB2-206ENST00000568219 PPP1R27Q86WC6 154 aa8.73□□□□□ -1.01
PALB2-206ENST00000568219 RNF125Q96EQ8 232 aa8.73□□□□□ -1.01
PALB2-206ENST00000568219 URB1-AS1Q96HZ7 61 aa8.73□□□□□ -1.01
PALB2-206ENST00000568219 ANAPC13Q9BS18 74 aa8.73□□□□□ -1.01
PALB2-206ENST00000568219 LINC00312Q9Y6C7 94 aa8.73□□□□□ -1.01
PALB2-206ENST00000568219 FNDC10F2Z333 226 aa8.72□□□□□ -1.01
PALB2-206ENST00000568219 HOXA3O43365 443 aaPredicted RBP8.72□□□□□ -1.01
PALB2-206ENST00000568219 SH2D1AO60880 128 aa8.72□□□□□ -1.01
PALB2-206ENST00000568219 NDUFS7O75251 213 aa8.72□□□□□ -1.01
PALB2-206ENST00000568219 IGHV1-46P01743 117 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms