RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 COX7A2P2O60397 106 aa8.04□□□□□ -1.12
CDH3-206ENST00000567674 CXCL3P19876 107 aa8.04□□□□□ -1.12
CDH3-206ENST00000567674 CAMLGP49069 296 aa8.04□□□□□ -1.12
CDH3-206ENST00000567674 CAV2P51636 162 aa8.04□□□□□ -1.12
CDH3-206ENST00000567674 RRAS2P62070 204 aaPredicted RBP8.04□□□□□ -1.12
CDH3-206ENST00000567674 BAXQ07812 192 aa8.04□□□□□ -1.12
CDH3-206ENST00000567674 RRN3P1Q2M238 152 aa8.04□□□□□ -1.12
CDH3-206ENST00000567674 AMTNQ6UX39 209 aa8.04□□□□□ -1.12
CDH3-206ENST00000567674 PATE2Q6UY27 113 aa8.04□□□□□ -1.12
CDH3-206ENST00000567674 TMEM252Q8N6L7 170 aa8.04□□□□□ -1.12
CDH3-206ENST00000567674 ENKURQ8TC29 256 aa8.04□□□□□ -1.12
CDH3-206ENST00000567674 LRRC20Q8TCA0 184 aa8.04□□□□□ -1.12
CDH3-206ENST00000567674 MRPL53Q96EL3 112 aaKnown RBP8.04□□□□□ -1.12
CDH3-206ENST00000567674 SCRT1Q9BWW7 348 aa8.04□□□□□ -1.12
CDH3-206ENST00000567674 SLC25A31Q9H0C2 315 aa8.04□□□□□ -1.12
CDH3-206ENST00000567674 APLNQ9ULZ1 77 aa8.04□□□□□ -1.12
CDH3-206ENST00000567674 TRAV8-2A0A0B4J237 113 aa8.03□□□□□ -1.12
CDH3-206ENST00000567674 LYRM9A8MSI8 78 aa8.03□□□□□ -1.12
CDH3-206ENST00000567674 FAM25EA8MYX2 175 aa8.03□□□□□ -1.12
CDH3-206ENST00000567674 E5RGE8 158 aa8.03□□□□□ -1.12
CDH3-206ENST00000567674 BCAP31P51572 246 aa8.03□□□□□ -1.12
CDH3-206ENST00000567674 CNN1P51911 297 aaKnown RBP8.03□□□□□ -1.12
CDH3-206ENST00000567674 DEFA1P59665 94 aa8.03□□□□□ -1.12
CDH3-206ENST00000567674 DEFA3P59666 94 aa8.03□□□□□ -1.12
CDH3-206ENST00000567674 ARL16Q0P5N6 197 aa8.03□□□□□ -1.12
CDH3-206ENST00000567674 PDE6HQ13956 83 aa8.03□□□□□ -1.12
CDH3-206ENST00000567674 C12orf74Q32Q52 190 aa8.03□□□□□ -1.12
CDH3-206ENST00000567674 C10orf113Q5VZT2 155 aa8.03□□□□□ -1.12
CDH3-206ENST00000567674 Q6ZTC4 211 aa8.03□□□□□ -1.12
CDH3-206ENST00000567674 OR8A1Q8NGG7 326 aa8.03□□□□□ -1.12
CDH3-206ENST00000567674 TMEM37Q8WXS4 190 aa8.03□□□□□ -1.12
CDH3-206ENST00000567674 ODF3Q96PU9 254 aa8.03□□□□□ -1.12
CDH3-206ENST00000567674 MGST2Q99735 147 aa8.03□□□□□ -1.12
CDH3-206ENST00000567674 MARVELD1Q9BSK0 173 aa8.03□□□□□ -1.12
CDH3-206ENST00000567674 ZNF331Q9NQX6 463 aaPredicted RBP8.03□□□□□ -1.12
CDH3-206ENST00000567674 KCNIP2Q9NS61 270 aa8.03□□□□□ -1.12
CDH3-206ENST00000567674 DKK2Q9UBU2 259 aa8.03□□□□□ -1.12
CDH3-206ENST00000567674 LSM5Q9Y4Y9 91 aaKnown RBP8.03□□□□□ -1.12
CDH3-206ENST00000567674 VPS13DQ5THJ4 4388 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 DEFB131BA0A096LNP1 70 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 IGLL5B9A064 214 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 DEFB4AO15263 64 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 CCNKO75909 580 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 INSP01308 110 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 PET100P0DJ07 73 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 P0DMU3 169 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 FAM231AP0DMU4 169 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 FAM231CP0DMU5 169 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 RAB32Q13637 225 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 ZNF493Q6ZR52 646 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 NRARPQ7Z6K4 114 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 C1orf158Q8N1D5 194 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 ZNF738Q8NE65 137 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 OR11H7Q8NGC8 314 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 C20orf173Q96LM9 149 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 SEC22CQ9BRL7 303 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 NIPSNAP3BQ9BS92 247 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 NDUFAF3Q9BU61 184 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 SLC35B3Q9H1N7 401 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 TMEM14CQ9P0S9 112 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 PRELID1Q9Y255 219 aa8.02□□□□□ -1.13
CDH3-206ENST00000567674 IGHV4-4A0A075B6R2 117 aa8.01□□□□□ -1.13
CDH3-206ENST00000567674 BOLA2-SMG1P6H3BVE0 249 aa8.01□□□□□ -1.13
CDH3-206ENST00000567674 CCSO14618 274 aa8.01□□□□□ -1.13
CDH3-206ENST00000567674 IGLC2P0DOY2 106 aa8.01□□□□□ -1.13
CDH3-206ENST00000567674 TAS2R60P59551 318 aa8.01□□□□□ -1.13
CDH3-206ENST00000567674 OPCMLQ14982 345 aa8.01□□□□□ -1.13
CDH3-206ENST00000567674 SAT2Q96F10 170 aaPredicted RBP8.01□□□□□ -1.13
CDH3-206ENST00000567674 UHRF2Q96PU4 802 aa8.01□□□□□ -1.13
CDH3-206ENST00000567674 SLC39A9Q9NUM3 307 aa8.01□□□□□ -1.13
CDH3-206ENST00000567674 LOC102723971A0A1B0GUV8 181 aa8□□□□□ -1.13
CDH3-206ENST00000567674 FAM24AA6NFZ4 105 aa8□□□□□ -1.13
CDH3-206ENST00000567674 F6UB75 175 aa8□□□□□ -1.13
CDH3-206ENST00000567674 INMT-MINDY4F8WBC2 141 aa8□□□□□ -1.13
CDH3-206ENST00000567674 CRXO43186 299 aaPredicted RBP8□□□□□ -1.13
CDH3-206ENST00000567674 CST7O76096 145 aa8□□□□□ -1.13
CDH3-206ENST00000567674 IGKV3-20P01619 116 aa8□□□□□ -1.13
CDH3-206ENST00000567674 NMBP08949 121 aa8□□□□□ -1.13
CDH3-206ENST00000567674 CDKN1BP46527 198 aa8□□□□□ -1.13
CDH3-206ENST00000567674 FAM3BP58499 235 aaPredicted RBP8□□□□□ -1.13
CDH3-206ENST00000567674 FGL1Q08830 312 aa8□□□□□ -1.13
CDH3-206ENST00000567674 OR10J6PQ8NGY7 276 aa8□□□□□ -1.13
CDH3-206ENST00000567674 RPUSD4Q96CM3 377 aaKnown RBP8□□□□□ -1.13
CDH3-206ENST00000567674 TMEM208Q9BTX3 173 aa8□□□□□ -1.13
CDH3-206ENST00000567674 PPP1R14DQ9NXH3 145 aa8□□□□□ -1.13
CDH3-206ENST00000567674 H7BYZ3 331 aa7.99□□□□□ -1.13
CDH3-206ENST00000567674 HIST1H1EP10412 219 aaKnown RBP7.99□□□□□ -1.13
CDH3-206ENST00000567674 S100A10P60903 97 aa7.99□□□□□ -1.13
CDH3-206ENST00000567674 RNF212Q495C1 297 aa7.99□□□□□ -1.13
CDH3-206ENST00000567674 C15orf53Q8NAA6 179 aa7.99□□□□□ -1.13
CDH3-206ENST00000567674 C16orf74Q96GX8 76 aa7.99□□□□□ -1.13
CDH3-206ENST00000567674 CELA1Q9UNI1 258 aa7.99□□□□□ -1.13
CDH3-206ENST00000567674 TRBV7-9A0A0J9YWB2 115 aa7.98□□□□□ -1.13
CDH3-206ENST00000567674 IGSF23A1L1A6 192 aa7.98□□□□□ -1.13
CDH3-206ENST00000567674 C17orf112F2Z3M2 114 aa7.98□□□□□ -1.13
CDH3-206ENST00000567674 RHOBP62745 196 aa7.98□□□□□ -1.13
CDH3-206ENST00000567674 FAM222AQ5U5X8 452 aa7.98□□□□□ -1.13
CDH3-206ENST00000567674 NPCDR1Q9BY65 106 aa7.98□□□□□ -1.13
CDH3-206ENST00000567674 PARD6GQ9BYG4 376 aaPredicted RBP7.98□□□□□ -1.13
CDH3-206ENST00000567674 YTHDF2Q9Y5A9 579 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms