RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, human

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD4-219	ENST00000567399	BLNK	Q8WV28	456 aa		11.17	□□□□□ -0.62
COMMD4-219	ENST00000567399	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.17	□□□□□ -0.62
COMMD4-219	ENST00000567399	C20orf173	Q96LM9	149 aa		11.17	□□□□□ -0.62
COMMD4-219	ENST00000567399	OR51M1	Q9H341	326 aa		11.17	□□□□□ -0.62
COMMD4-219	ENST00000567399	HRH4	Q9H3N8	390 aa		11.17	□□□□□ -0.62
COMMD4-219	ENST00000567399	SAV1	Q9H4B6	383 aa	Predicted RBP	11.17	□□□□□ -0.62
COMMD4-219	ENST00000567399	RFNG	Q9Y644	331 aa		11.17	□□□□□ -0.62
COMMD4-219	ENST00000567399		A0A0D9SG52	128 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	HMSD	A8MTL9	139 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	MRPS12	O15235	138 aa	Known RBP	11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	SPRY2	O43597	315 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	MB	P02144	154 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	PYY	P10082	97 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	HIST1H1E	P10412	219 aa	Known RBP	11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	HLA-DRB4	P13762	266 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	M6PR	P20645	277 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	PSG3	Q16557	428 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	DEFB135	Q30KP9	77 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	FAM122C	Q6P4D5	195 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399		Q6ZWC4	215 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	OR10G4	Q8NGN3	311 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	OR10G9	Q8NGN4	311 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	OR10G7	Q8NGN6	311 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	ARPC5L	Q9BPX5	153 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	PSMG3	Q9BT73	122 aa	Predicted RBP	11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	PAXX	Q9BUH6	204 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	SLC25A2	Q9BXI2	301 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	PPP1R14D	Q9NXH3	145 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	TMEM14C	Q9P0S9	112 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	HLA-DRB4	X5D2U9	266 aa		11.16	□□□□□ -0.62
COMMD4-219	ENST00000567399	TRAV8-2	A0A0B4J237	113 aa		11.15	□□□□□ -0.62
COMMD4-219	ENST00000567399	KANTR	A0A1W2PQU2	76 aa		11.15	□□□□□ -0.62
COMMD4-219	ENST00000567399		F6UB75	175 aa		11.15	□□□□□ -0.62
COMMD4-219	ENST00000567399		H3BMM0	161 aa		11.15	□□□□□ -0.62
COMMD4-219	ENST00000567399		H3BQ15	152 aa		11.15	□□□□□ -0.62
COMMD4-219	ENST00000567399	PFDN1	O60925	122 aa		11.15	□□□□□ -0.62
COMMD4-219	ENST00000567399	DUSP14	O95147	198 aa	Known RBP	11.15	□□□□□ -0.62
COMMD4-219	ENST00000567399	IGLC2	P0DOY2	106 aa		11.15	□□□□□ -0.62
COMMD4-219	ENST00000567399	DEFB1	P60022	68 aa		11.15	□□□□□ -0.62
COMMD4-219	ENST00000567399	SERF2	P84101	59 aa		11.15	□□□□□ -0.62
COMMD4-219	ENST00000567399	PSG9	Q00887	426 aa		11.15	□□□□□ -0.62
COMMD4-219	ENST00000567399	KHDC3L	Q587J8	217 aa		11.15	□□□□□ -0.62
COMMD4-219	ENST00000567399	GDF5OS	Q5U4N7	250 aa		11.15	□□□□□ -0.62
COMMD4-219	ENST00000567399	AKAP14	Q86UN6	197 aa		11.15	□□□□□ -0.62
COMMD4-219	ENST00000567399	OR2G3	Q8NGZ4	309 aa		11.15	□□□□□ -0.62
COMMD4-219	ENST00000567399	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.15	□□□□□ -0.62
COMMD4-219	ENST00000567399	CLEC5A	Q9NY25	188 aa		11.15	□□□□□ -0.62
COMMD4-219	ENST00000567399	OR10J4	P0C629	311 aa		11.14	□□□□□ -0.63
COMMD4-219	ENST00000567399	HLA-DMB	P28068	263 aa		11.14	□□□□□ -0.63
COMMD4-219	ENST00000567399	RAB2A	P61019	212 aa		11.14	□□□□□ -0.63
COMMD4-219	ENST00000567399	ZNF345	Q14585	488 aa		11.14	□□□□□ -0.63
COMMD4-219	ENST00000567399	TMEM41B	Q5BJD5	291 aa		11.14	□□□□□ -0.63
COMMD4-219	ENST00000567399	KCNRG	Q8N5I3	272 aa		11.14	□□□□□ -0.63
COMMD4-219	ENST00000567399	OR11H4	Q8NGC9	324 aa		11.14	□□□□□ -0.63
COMMD4-219	ENST00000567399	RNF141	Q8WVD5	230 aa		11.14	□□□□□ -0.63
COMMD4-219	ENST00000567399	ST6GAL2	Q96JF0	529 aa		11.14	□□□□□ -0.63
COMMD4-219	ENST00000567399	C1QTNF4	Q9BXJ3	329 aa		11.14	□□□□□ -0.63
COMMD4-219	ENST00000567399	SH3BGRL3	Q9H299	93 aa		11.14	□□□□□ -0.63
COMMD4-219	ENST00000567399	AAMDC	Q9H7C9	122 aa		11.14	□□□□□ -0.63
COMMD4-219	ENST00000567399	ZNF586	Q9NXT0	402 aa		11.14	□□□□□ -0.63
COMMD4-219	ENST00000567399	TRBV19	A0A075B6N1	114 aa		11.13	□□□□□ -0.63
COMMD4-219	ENST00000567399		A0A0J9YX75	114 aa		11.13	□□□□□ -0.63
COMMD4-219	ENST00000567399	NBEAP1	P0C6P0	100 aa		11.13	□□□□□ -0.63
COMMD4-219	ENST00000567399	HIST1H1A	Q02539	215 aa	Predicted RBP	11.13	□□□□□ -0.63
COMMD4-219	ENST00000567399	TCTE3	Q8IZS6	198 aa		11.13	□□□□□ -0.63
COMMD4-219	ENST00000567399	RPUSD4	Q96CM3	377 aa	Known RBP	11.13	□□□□□ -0.63
COMMD4-219	ENST00000567399	RNF183	Q96D59	192 aa		11.13	□□□□□ -0.63
COMMD4-219	ENST00000567399	FAM167A-AS1	Q96KT0	104 aa		11.13	□□□□□ -0.63
COMMD4-219	ENST00000567399	OVOL2	Q9BRP0	275 aa		11.13	□□□□□ -0.63
COMMD4-219	ENST00000567399	TP53TG1	Q9Y2A0	90 aa		11.13	□□□□□ -0.63
COMMD4-219	ENST00000567399	SLC17A3	O00476	420 aa		11.12	□□□□□ -0.63
COMMD4-219	ENST00000567399	HMGB3	O15347	200 aa	Known RBP	11.12	□□□□□ -0.63
COMMD4-219	ENST00000567399	ZNF705D	P0CH99	300 aa	Predicted RBP	11.12	□□□□□ -0.63
COMMD4-219	ENST00000567399	ZNF705B	P0CI00	300 aa	Predicted RBP	11.12	□□□□□ -0.63
COMMD4-219	ENST00000567399	CDC34	P49427	236 aa	Predicted RBP	11.12	□□□□□ -0.63
COMMD4-219	ENST00000567399	FXYD7	P58549	80 aa		11.12	□□□□□ -0.63
COMMD4-219	ENST00000567399	UBE2L3	P68036	154 aa	Known RBP	11.12	□□□□□ -0.63
COMMD4-219	ENST00000567399	AKR1C8P	Q5T2L2	129 aa		11.12	□□□□□ -0.63
COMMD4-219	ENST00000567399	OR10J6P	Q8NGY7	276 aa		11.12	□□□□□ -0.63
COMMD4-219	ENST00000567399	SAT2	Q96F10	170 aa	Predicted RBP	11.12	□□□□□ -0.63
COMMD4-219	ENST00000567399	ZNF471	Q9BX82	626 aa	Predicted RBP	11.12	□□□□□ -0.63
COMMD4-219	ENST00000567399	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.12	□□□□□ -0.63
COMMD4-219	ENST00000567399	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.11	□□□□□ -0.63
COMMD4-219	ENST00000567399	ZNF253	O75346	499 aa		11.11	□□□□□ -0.63
COMMD4-219	ENST00000567399	EIF3G	O75821	320 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
COMMD4-219	ENST00000567399	PRB4	P10163	310 aa	Predicted RBP	11.11	□□□□□ -0.63
COMMD4-219	ENST00000567399	EIF5A	P63241	154 aa	Known RBP	11.11	□□□□□ -0.63
COMMD4-219	ENST00000567399	PDE6H	Q13956	83 aa		11.11	□□□□□ -0.63
COMMD4-219	ENST00000567399	TMUB2	Q71RG4	321 aa		11.11	□□□□□ -0.63
COMMD4-219	ENST00000567399	OR8A1	Q8NGG7	326 aa		11.11	□□□□□ -0.63
COMMD4-219	ENST00000567399	WWC2-AS2	Q96NR7	200 aa		11.11	□□□□□ -0.63
COMMD4-219	ENST00000567399	RARRES2	Q99969	163 aa		11.11	□□□□□ -0.63
COMMD4-219	ENST00000567399	XCL2	Q9UBD3	114 aa		11.11	□□□□□ -0.63
COMMD4-219	ENST00000567399	PRELID1	Q9Y255	219 aa		11.11	□□□□□ -0.63
COMMD4-219	ENST00000567399	BCL2L11	O43521	198 aa		11.1	□□□□□ -0.63
COMMD4-219	ENST00000567399	CNN1	P51911	297 aa	Known RBP	11.1	□□□□□ -0.63
COMMD4-219	ENST00000567399	PQLC2	Q6ZP29	291 aa		11.1	□□□□□ -0.63
COMMD4-219	ENST00000567399	OR11H2	Q8NH07	326 aa		11.1	□□□□□ -0.63
COMMD4-219	ENST00000567399	FXYD5	Q96DB9	178 aa		11.1	□□□□□ -0.63
COMMD4-219	ENST00000567399	CYTL1	Q9NRR1	136 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 91 ms