RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 ZNF546Q86UE3 836 aa10.76□□□□□ -0.69
SMPD3-208ENST00000566723 OR8A1Q8NGG7 326 aa10.76□□□□□ -0.69
SMPD3-208ENST00000566723 C20orf85Q9H1P6 137 aa10.76□□□□□ -0.69
SMPD3-208ENST00000566723 ARV1Q9H2C2 271 aa10.76□□□□□ -0.69
SMPD3-208ENST00000566723 GSKIPQ9P0R6 139 aa10.76□□□□□ -0.69
SMPD3-208ENST00000566723 LYRM9A8MSI8 78 aa10.75□□□□□ -0.69
SMPD3-208ENST00000566723 MRPS12O15235 138 aaKnown RBP10.75□□□□□ -0.69
SMPD3-208ENST00000566723 RTL8CO15255 209 aa10.75□□□□□ -0.69
SMPD3-208ENST00000566723 MBPP02686 304 aaPredicted RBP10.75□□□□□ -0.69
SMPD3-208ENST00000566723 CXCL2P19875 107 aa10.75□□□□□ -0.69
SMPD3-208ENST00000566723 TSPOP30536 169 aa10.75□□□□□ -0.69
SMPD3-208ENST00000566723 ARL16Q0P5N6 197 aa10.75□□□□□ -0.69
SMPD3-208ENST00000566723 PSG3Q16557 428 aa10.75□□□□□ -0.69
SMPD3-208ENST00000566723 PATE2Q6UY27 113 aa10.75□□□□□ -0.69
SMPD3-208ENST00000566723 LRRC20Q8TCA0 184 aa10.75□□□□□ -0.69
SMPD3-208ENST00000566723 GGACTQ9BVM4 153 aa10.75□□□□□ -0.69
SMPD3-208ENST00000566723 TRAV12-2A0A075B6T6 113 aa10.74□□□□□ -0.69
SMPD3-208ENST00000566723 C7orf66A4D0T2 115 aa10.74□□□□□ -0.69
SMPD3-208ENST00000566723 GOSR2O14653 212 aa10.74□□□□□ -0.69
SMPD3-208ENST00000566723 AGPAT2O15120 278 aa10.74□□□□□ -0.69
SMPD3-208ENST00000566723 PRM2P04554 102 aa10.74□□□□□ -0.69
SMPD3-208ENST00000566723 RHOBP62745 196 aa10.74□□□□□ -0.69
SMPD3-208ENST00000566723 RNF212Q495C1 297 aa10.74□□□□□ -0.69
SMPD3-208ENST00000566723 LCN15Q6UWW0 184 aa10.74□□□□□ -0.69
SMPD3-208ENST00000566723 TMEM256Q8N2U0 113 aa10.74□□□□□ -0.69
SMPD3-208ENST00000566723 C15orf53Q8NAA6 179 aa10.74□□□□□ -0.69
SMPD3-208ENST00000566723 IGLV2-18A0A075B6J9 118 aa10.73□□□□□ -0.69
SMPD3-208ENST00000566723 PLAC8L1A1L4L8 177 aa10.73□□□□□ -0.69
SMPD3-208ENST00000566723 PRSS29PA6NIE9 313 aa10.73□□□□□ -0.69
SMPD3-208ENST00000566723 CCSO14618 274 aa10.73□□□□□ -0.69
SMPD3-208ENST00000566723 ZNF846Q147U1 533 aa10.73□□□□□ -0.69
SMPD3-208ENST00000566723 Q6ZR54 194 aa10.73□□□□□ -0.69
SMPD3-208ENST00000566723 LINC00305Q7Z4B0 112 aa10.73□□□□□ -0.69
SMPD3-208ENST00000566723 RPUSD4Q96CM3 377 aaKnown RBP10.73□□□□□ -0.69
SMPD3-208ENST00000566723 SLC50A1Q9BRV3 221 aa10.73□□□□□ -0.69
SMPD3-208ENST00000566723 KRTAP17-1Q9BYP8 105 aa10.73□□□□□ -0.69
SMPD3-208ENST00000566723 PPP1R14DQ9NXH3 145 aa10.73□□□□□ -0.69
SMPD3-208ENST00000566723 L7N2F9 121 aa10.72□□□□□ -0.69
SMPD3-208ENST00000566723 PLA2G10O15496 165 aa10.72□□□□□ -0.69
SMPD3-208ENST00000566723 LYRM1O43325 122 aa10.72□□□□□ -0.69
SMPD3-208ENST00000566723 COX7A2P2O60397 106 aa10.72□□□□□ -0.69
SMPD3-208ENST00000566723 DEFB130BP0DP73 79 aa10.72□□□□□ -0.69
SMPD3-208ENST00000566723 DEFB130AP0DP74 79 aa10.72□□□□□ -0.69
SMPD3-208ENST00000566723 VAMP2P63027 116 aa10.72□□□□□ -0.69
SMPD3-208ENST00000566723 MGST2Q99735 147 aa10.72□□□□□ -0.69
SMPD3-208ENST00000566723 ZNF331Q9NQX6 463 aaPredicted RBP10.72□□□□□ -0.69
SMPD3-208ENST00000566723 MUC4Q99102 2169 aa10.72□□□□□ -0.69
SMPD3-208ENST00000566723 PRB4P10163 310 aaPredicted RBP10.71□□□□□ -0.69
SMPD3-208ENST00000566723 AZU1P20160 251 aa10.71□□□□□ -0.69
SMPD3-208ENST00000566723 CDKN1BP46527 198 aa10.71□□□□□ -0.69
SMPD3-208ENST00000566723 TAS2R60P59551 318 aa10.71□□□□□ -0.69
SMPD3-208ENST00000566723 BPIFA4PQ86YQ2 179 aa10.71□□□□□ -0.69
SMPD3-208ENST00000566723 C16orf74Q96GX8 76 aa10.71□□□□□ -0.69
SMPD3-208ENST00000566723 LINC01587Q99440 93 aa10.71□□□□□ -0.69
SMPD3-208ENST00000566723 LSM5Q9Y4Y9 91 aaKnown RBP10.71□□□□□ -0.69
SMPD3-208ENST00000566723 FAM25EA8MYX2 175 aa10.7□□□□□ -0.7
SMPD3-208ENST00000566723 TCRBP04435 133 aa10.7□□□□□ -0.7
SMPD3-208ENST00000566723 FAM3BP58499 235 aaPredicted RBP10.7□□□□□ -0.7
SMPD3-208ENST00000566723 MORN5Q5VZ52 161 aa10.7□□□□□ -0.7
SMPD3-208ENST00000566723 C10orf113Q5VZT2 155 aa10.7□□□□□ -0.7
SMPD3-208ENST00000566723 TMEM37Q8WXS4 190 aa10.7□□□□□ -0.7
SMPD3-208ENST00000566723 NUDT15Q9NV35 164 aa10.7□□□□□ -0.7
SMPD3-208ENST00000566723 RYR1P21817 5038 aa10.69□□□□□ -0.7
SMPD3-208ENST00000566723 TRAV6A0A075B6T7 132 aa10.69□□□□□ -0.7
SMPD3-208ENST00000566723 SLC17A3O00476 420 aa10.69□□□□□ -0.7
SMPD3-208ENST00000566723 SNRPCP09234 159 aaKnown RBP10.69□□□□□ -0.7
SMPD3-208ENST00000566723 CAMLGP49069 296 aa10.69□□□□□ -0.7
SMPD3-208ENST00000566723 BCAP31P51572 246 aa10.69□□□□□ -0.7
SMPD3-208ENST00000566723 CAV2P51636 162 aa10.69□□□□□ -0.7
SMPD3-208ENST00000566723 RAB31Q13636 194 aa10.69□□□□□ -0.7
SMPD3-208ENST00000566723 OPCMLQ14982 345 aa10.69□□□□□ -0.7
SMPD3-208ENST00000566723 FCN2Q15485 313 aa10.69□□□□□ -0.7
SMPD3-208ENST00000566723 ZNF431Q8TF32 576 aaPredicted RBP10.69□□□□□ -0.7
SMPD3-208ENST00000566723 SEC22CQ9BRL7 303 aa10.69□□□□□ -0.7
SMPD3-208ENST00000566723 C11orf1Q9H5F2 150 aa10.69□□□□□ -0.7
SMPD3-208ENST00000566723 PXMP4Q9Y6I8 212 aa10.69□□□□□ -0.7
SMPD3-208ENST00000566723 C5orf51A6NDU8 294 aa10.68□□□□□ -0.7
SMPD3-208ENST00000566723 F5H768 121 aa10.68□□□□□ -0.7
SMPD3-208ENST00000566723 H3BTX0 84 aa10.68□□□□□ -0.7
SMPD3-208ENST00000566723 CST7O76096 145 aa10.68□□□□□ -0.7
SMPD3-208ENST00000566723 ATP5G1P05496 136 aa10.68□□□□□ -0.7
SMPD3-208ENST00000566723 IGLC2P0DOY2 106 aa10.68□□□□□ -0.7
SMPD3-208ENST00000566723 HTN1P15515 57 aa10.68□□□□□ -0.7
SMPD3-208ENST00000566723 ATP5G3P48201 142 aa10.68□□□□□ -0.7
SMPD3-208ENST00000566723 SOHLH1Q5JUK2 328 aa10.68□□□□□ -0.7
SMPD3-208ENST00000566723 NRARPQ7Z6K4 114 aa10.68□□□□□ -0.7
SMPD3-208ENST00000566723 RNASE8Q8TDE3 154 aaKnown RBP10.68□□□□□ -0.7
SMPD3-208ENST00000566723 TMEM263Q8WUH6 116 aaKnown RBP10.68□□□□□ -0.7
SMPD3-208ENST00000566723 C20orf144Q9BQM9 153 aa10.68□□□□□ -0.7
SMPD3-208ENST00000566723 ATG101Q9BSB4 218 aa10.68□□□□□ -0.7
SMPD3-208ENST00000566723 TIMM8BQ9Y5J9 83 aaPredicted RBP10.68□□□□□ -0.7
SMPD3-208ENST00000566723 CBY3A6NI87 242 aa10.67□□□□□ -0.7
SMPD3-208ENST00000566723 H7BYZ3 331 aa10.67□□□□□ -0.7
SMPD3-208ENST00000566723 MIC13Q5XKP0 118 aa10.67□□□□□ -0.7
SMPD3-208ENST00000566723 ZNF493Q6ZR52 646 aa10.67□□□□□ -0.7
SMPD3-208ENST00000566723 Q6ZRG5 221 aa10.67□□□□□ -0.7
SMPD3-208ENST00000566723 C12orf45Q8N5I9 185 aaPredicted RBP10.67□□□□□ -0.7
SMPD3-208ENST00000566723 OR10J6PQ8NGY7 276 aa10.67□□□□□ -0.7
SMPD3-208ENST00000566723 DNAJC4Q9NNZ3 241 aa10.67□□□□□ -0.7
SMPD3-208ENST00000566723 UQCC1Q9NVA1 299 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms