RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 EDN2P20800 178 aa13.52□□□□□ -0.24
HERC2-208ENST00000566635 CDX1P47902 265 aaPredicted RBP13.52□□□□□ -0.24
HERC2-208ENST00000566635 TCEAL7Q9BRU2 100 aa13.52□□□□□ -0.24
HERC2-208ENST00000566635 SMAD5-AS1Q9Y6J3 95 aa13.52□□□□□ -0.24
HERC2-208ENST00000566635 TRBV19A0A075B6N1 114 aa13.52□□□□□ -0.25
HERC2-208ENST00000566635 GATCO43716 136 aaKnown RBP13.52□□□□□ -0.25
HERC2-208ENST00000566635 NDUFS6O75380 124 aaKnown RBP13.52□□□□□ -0.25
HERC2-208ENST00000566635 S100A9P06702 114 aaKnown RBP13.52□□□□□ -0.25
HERC2-208ENST00000566635 MYCNOSP40205 109 aa13.52□□□□□ -0.25
HERC2-208ENST00000566635 TM4SF20Q53R12 229 aa13.52□□□□□ -0.25
HERC2-208ENST00000566635 S100A7P31151 101 aa13.51□□□□□ -0.25
HERC2-208ENST00000566635 RNF212Q495C1 297 aa13.51□□□□□ -0.25
HERC2-208ENST00000566635 GPHB5Q86YW7 130 aa13.51□□□□□ -0.25
HERC2-208ENST00000566635 KLHL30-AS1Q8NEE0 82 aa13.51□□□□□ -0.25
HERC2-208ENST00000566635 C2CD4CQ8TF44 421 aa13.51□□□□□ -0.25
HERC2-208ENST00000566635 C4orf3Q8WVX3 66 aa13.51□□□□□ -0.25
HERC2-208ENST00000566635 SMIM7Q9BQ49 75 aa13.51□□□□□ -0.25
HERC2-208ENST00000566635 Q9H3A6 140 aa13.51□□□□□ -0.25
HERC2-208ENST00000566635 NIPBLQ6KC79 2804 aaeCLIP13.51□□□□□ -0.25
HERC2-208ENST00000566635 ZNF727A8MUV8 499 aa13.51□□□□□ -0.25
HERC2-208ENST00000566635 S100PP25815 95 aa13.51□□□□□ -0.25
HERC2-208ENST00000566635 GNG5P63218 68 aa13.51□□□□□ -0.25
HERC2-208ENST00000566635 FAM106AQ4KMX7 169 aa13.51□□□□□ -0.25
HERC2-208ENST00000566635 EXOC3-AS1Q8N2X6 119 aa13.51□□□□□ -0.25
HERC2-208ENST00000566635 C11orf52Q96A22 123 aa13.51□□□□□ -0.25
HERC2-208ENST00000566635 DUX3Q96PT4 197 aa13.51□□□□□ -0.25
HERC2-208ENST00000566635 RNF114Q9Y508 228 aa13.51□□□□□ -0.25
HERC2-208ENST00000566635 HOXD3P31249 432 aaPredicted RBP13.5□□□□□ -0.25
HERC2-208ENST00000566635 C15orf54Q8N8G6 183 aa13.5□□□□□ -0.25
HERC2-208ENST00000566635 RNF24Q9Y225 148 aa13.5□□□□□ -0.25
HERC2-208ENST00000566635 PGPA6NDG6 321 aa13.49□□□□□ -0.25
HERC2-208ENST00000566635 SNRPEP62304 92 aaKnown RBP13.49□□□□□ -0.25
HERC2-208ENST00000566635 NIPSNAP3BQ9BS92 247 aa13.49□□□□□ -0.25
HERC2-208ENST00000566635 DAZ1Q9NQZ3 744 aaKnown RBP13.49□□□□□ -0.25
HERC2-208ENST00000566635 A0A1W2PRX2 142 aa13.49□□□□□ -0.25
HERC2-208ENST00000566635 PRB4P10163 310 aaPredicted RBP13.49□□□□□ -0.25
HERC2-208ENST00000566635 SLURP1P55000 103 aa13.49□□□□□ -0.25
HERC2-208ENST00000566635 SYNJ2BPP57105 145 aa13.49□□□□□ -0.25
HERC2-208ENST00000566635 PROK1P58294 105 aa13.49□□□□□ -0.25
HERC2-208ENST00000566635 C16orf54Q6UWD8 224 aa13.49□□□□□ -0.25
HERC2-208ENST00000566635 SIGLEC15Q6ZMC9 328 aa13.49□□□□□ -0.25
HERC2-208ENST00000566635 C8orf86Q6ZUL3 223 aa13.49□□□□□ -0.25
HERC2-208ENST00000566635 SMCO4Q9NRQ5 59 aa13.49□□□□□ -0.25
HERC2-208ENST00000566635 SELENOKQ9Y6D0 94 aa13.49□□□□□ -0.25
HERC2-208ENST00000566635 C2CD3Q4AC94 2353 aa13.48□□□□□ -0.25
HERC2-208ENST00000566635 M0R036 132 aa13.48□□□□□ -0.25
HERC2-208ENST00000566635 SLC25A5P05141 298 aaKnown RBP13.48□□□□□ -0.25
HERC2-208ENST00000566635 AWAT1Q58HT5 328 aa13.48□□□□□ -0.25
HERC2-208ENST00000566635 C1orf194Q5T5A4 169 aa13.48□□□□□ -0.25
HERC2-208ENST00000566635 OR11H1Q8NG94 326 aa13.48□□□□□ -0.25
HERC2-208ENST00000566635 GLMPQ8WWB7 406 aa13.48□□□□□ -0.25
HERC2-208ENST00000566635 CITED2Q99967 270 aaPredicted RBP13.48□□□□□ -0.25
HERC2-208ENST00000566635 RPH3ALQ9UNE2 315 aa13.48□□□□□ -0.25
HERC2-208ENST00000566635 IGHV7-4-1A0A0J9YVY3 117 aa13.48□□□□□ -0.25
HERC2-208ENST00000566635 S100A6P06703 90 aa13.48□□□□□ -0.25
HERC2-208ENST00000566635 ZFP82Q8N141 532 aa13.48□□□□□ -0.25
HERC2-208ENST00000566635 OTORQ9NRC9 128 aa13.48□□□□□ -0.25
HERC2-208ENST00000566635 TMEM213A2RRL7 107 aa13.47□□□□□ -0.25
HERC2-208ENST00000566635 C1orf196B1AJZ1 125 aa13.47□□□□□ -0.25
HERC2-208ENST00000566635 GALR1P47211 349 aa13.47□□□□□ -0.25
HERC2-208ENST00000566635 TEP1Q99973 2627 aaKnown RBP13.47□□□□□ -0.25
HERC2-208ENST00000566635 TRBV20OR9-2A0A075B6H5 130 aa13.46□□□□□ -0.25
HERC2-208ENST00000566635 PGPEP1LA6NFU8 196 aa13.46□□□□□ -0.25
HERC2-208ENST00000566635 ZNF785A8K8V0 405 aa13.46□□□□□ -0.25
HERC2-208ENST00000566635 LINC01619G3V211 115 aa13.46□□□□□ -0.25
HERC2-208ENST00000566635 PEX7O00628 323 aa13.46□□□□□ -0.25
HERC2-208ENST00000566635 IGFL4Q6B9Z1 124 aa13.46□□□□□ -0.25
HERC2-208ENST00000566635 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.46□□□□□ -0.25
HERC2-208ENST00000566635 REC114Q7Z4M0 266 aa13.46□□□□□ -0.25
HERC2-208ENST00000566635 TVP23CQ96ET8 276 aa13.46□□□□□ -0.25
HERC2-208ENST00000566635 LINC00479Q96M42 142 aa13.46□□□□□ -0.25
HERC2-208ENST00000566635 GPR82Q96P67 336 aa13.46□□□□□ -0.25
HERC2-208ENST00000566635 NIT2Q9NQR4 276 aa13.46□□□□□ -0.25
HERC2-208ENST00000566635 UFC1Q9Y3C8 167 aa13.46□□□□□ -0.25
HERC2-208ENST00000566635 A0A087X0K7 114 aa13.46□□□□□ -0.26
HERC2-208ENST00000566635 K7EMT4 169 aa13.46□□□□□ -0.26
HERC2-208ENST00000566635 AKR1C3P42330 323 aa13.46□□□□□ -0.26
HERC2-208ENST00000566635 PDE6HQ13956 83 aa13.46□□□□□ -0.26
HERC2-208ENST00000566635 OR1N2Q8NGR9 330 aa13.46□□□□□ -0.26
HERC2-208ENST00000566635 RHPN1-AS1Q9BWJ2 59 aa13.46□□□□□ -0.26
HERC2-208ENST00000566635 EPDR1Q9UM22 224 aa13.46□□□□□ -0.26
HERC2-208ENST00000566635 A8MWP6 167 aa13.45□□□□□ -0.26
HERC2-208ENST00000566635 C5orf17Q8NAS9 161 aa13.45□□□□□ -0.26
HERC2-208ENST00000566635 TUBA4BQ9H853 241 aa13.45□□□□□ -0.26
HERC2-208ENST00000566635 SDF2L1Q9HCN8 221 aa13.45□□□□□ -0.26
HERC2-208ENST00000566635 NAT8Q9UHE5 227 aa13.45□□□□□ -0.26
HERC2-208ENST00000566635 SMPXQ9UHP9 88 aa13.45□□□□□ -0.26
HERC2-208ENST00000566635 M0R3E3 92 aa13.45□□□□□ -0.26
HERC2-208ENST00000566635 CHEK1O14757 476 aa13.45□□□□□ -0.26
HERC2-208ENST00000566635 KLF5Q13887 457 aaPredicted RBP13.45□□□□□ -0.26
HERC2-208ENST00000566635 C1QL4Q86Z23 238 aa13.45□□□□□ -0.26
HERC2-208ENST00000566635 DPF1Q92782 380 aa13.45□□□□□ -0.26
HERC2-208ENST00000566635 AURKAIP1Q9NWT8 199 aaPredicted RBP13.45□□□□□ -0.26
HERC2-208ENST00000566635 TRAV34A0A0B4J273 112 aa13.44□□□□□ -0.26
HERC2-208ENST00000566635 LGALS9O00182 355 aa13.44□□□□□ -0.26
HERC2-208ENST00000566635 MT-ND4LP03901 98 aa13.44□□□□□ -0.26
HERC2-208ENST00000566635 HLA-DMBP28068 263 aa13.44□□□□□ -0.26
HERC2-208ENST00000566635 KRTAP10-3P60369 221 aa13.44□□□□□ -0.26
HERC2-208ENST00000566635 TMEM241Q24JQ0 296 aa13.44□□□□□ -0.26
HERC2-208ENST00000566635 HIST1H2BAQ96A08 127 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms