RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 KCNIP4Q6PIL6 250 aa13□□□□□ -0.33
RAB40C-210ENST00000566290 FAM231DQ6ZW35 169 aa13□□□□□ -0.33
RAB40C-210ENST00000566290 DUX5Q96PT3 197 aa13□□□□□ -0.33
RAB40C-210ENST00000566290 SERTM2A0A1B0GWG4 89 aa12.99□□□□□ -0.33
RAB40C-210ENST00000566290 FBLL1A6NHQ2 334 aaKnown RBP12.99□□□□□ -0.33
RAB40C-210ENST00000566290 LINC01548A6NM66 108 aa12.99□□□□□ -0.33
RAB40C-210ENST00000566290 ISLRO14498 428 aa12.99□□□□□ -0.33
RAB40C-210ENST00000566290 GALR1P47211 349 aa12.99□□□□□ -0.33
RAB40C-210ENST00000566290 MEOX2P50222 304 aa12.99□□□□□ -0.33
RAB40C-210ENST00000566290 ATP5G2Q06055 141 aa12.99□□□□□ -0.33
RAB40C-210ENST00000566290 SCGB2A2Q13296 93 aa12.99□□□□□ -0.33
RAB40C-210ENST00000566290 FMC1Q96HJ9 113 aa12.99□□□□□ -0.33
RAB40C-210ENST00000566290 FAM210BQ96KR6 192 aa12.99□□□□□ -0.33
RAB40C-210ENST00000566290 Q9H3A6 140 aa12.99□□□□□ -0.33
RAB40C-210ENST00000566290 RABAC1Q9UI14 185 aa12.99□□□□□ -0.33
RAB40C-210ENST00000566290 VPREB3Q9UKI3 123 aa12.99□□□□□ -0.33
RAB40C-210ENST00000566290 A0A087X0K7 114 aa12.98□□□□□ -0.33
RAB40C-210ENST00000566290 OR2T8A6NH00 312 aa12.98□□□□□ -0.33
RAB40C-210ENST00000566290 IGLV2-8P01709 118 aa12.98□□□□□ -0.33
RAB40C-210ENST00000566290 CXCL1P09341 107 aa12.98□□□□□ -0.33
RAB40C-210ENST00000566290 Q6YL49 198 aa12.98□□□□□ -0.33
RAB40C-210ENST00000566290 OR10G8Q8NGN5 311 aa12.98□□□□□ -0.33
RAB40C-210ENST00000566290 CHRDL1Q9BU40 450 aa12.98□□□□□ -0.33
RAB40C-210ENST00000566290 SRD5A3Q9H8P0 318 aa12.98□□□□□ -0.33
RAB40C-210ENST00000566290 BIN3Q9NQY0 253 aa12.98□□□□□ -0.33
RAB40C-210ENST00000566290 ZNF586Q9NXT0 402 aa12.98□□□□□ -0.33
RAB40C-210ENST00000566290 A0A0G2JLM5 398 aa12.97□□□□□ -0.33
RAB40C-210ENST00000566290 K7EN84 100 aa12.97□□□□□ -0.33
RAB40C-210ENST00000566290 TCRAP04437 139 aa12.97□□□□□ -0.33
RAB40C-210ENST00000566290 GPR183P32249 361 aa12.97□□□□□ -0.33
RAB40C-210ENST00000566290 SIGLEC15Q6ZMC9 328 aa12.97□□□□□ -0.33
RAB40C-210ENST00000566290 TMEM86BQ8N661 226 aa12.97□□□□□ -0.33
RAB40C-210ENST00000566290 VWFP04275 2813 aa12.97□□□□□ -0.33
RAB40C-210ENST00000566290 PGPA6NDG6 321 aa12.96□□□□□ -0.33
RAB40C-210ENST00000566290 DNAJC9-AS1A6NH13 148 aa12.96□□□□□ -0.33
RAB40C-210ENST00000566290 SLC25A5P05141 298 aaKnown RBP12.96□□□□□ -0.33
RAB40C-210ENST00000566290 FAM3BP58499 235 aaPredicted RBP12.96□□□□□ -0.33
RAB40C-210ENST00000566290 RANP62826 216 aaKnown RBP12.96□□□□□ -0.33
RAB40C-210ENST00000566290 PSG9Q00887 426 aa12.96□□□□□ -0.33
RAB40C-210ENST00000566290 LY6EQ16553 131 aa12.96□□□□□ -0.33
RAB40C-210ENST00000566290 TOMM20LQ6UXN7 152 aa12.96□□□□□ -0.33
RAB40C-210ENST00000566290 U3KQE9 123 aa12.96□□□□□ -0.33
RAB40C-210ENST00000566290 CMYA5Q8N3K9 4069 aa12.96□□□□□ -0.33
RAB40C-210ENST00000566290 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.95□□□□□ -0.34
RAB40C-210ENST00000566290 TGIF2-C20orf24A0A0A6YYL0 155 aa12.95□□□□□ -0.34
RAB40C-210ENST00000566290 LTAP01374 205 aa12.95□□□□□ -0.34
RAB40C-210ENST00000566290 IGHV4-59P01825 116 aa12.95□□□□□ -0.34
RAB40C-210ENST00000566290 IGHG4P01861 327 aa12.95□□□□□ -0.34
RAB40C-210ENST00000566290 TRGV3P03979 118 aa12.95□□□□□ -0.34
RAB40C-210ENST00000566290 CLEC3BP05452 202 aa12.95□□□□□ -0.34
RAB40C-210ENST00000566290 MLST8Q9BVC4 326 aa12.95□□□□□ -0.34
RAB40C-210ENST00000566290 IL36BQ9NZH7 164 aa12.95□□□□□ -0.34
RAB40C-210ENST00000566290 SH2D7A6NKC9 451 aaPredicted RBP12.94□□□□□ -0.34
RAB40C-210ENST00000566290 UBE2G1P62253 170 aa12.94□□□□□ -0.34
RAB40C-210ENST00000566290 LEMD1Q68G75 181 aa12.94□□□□□ -0.34
RAB40C-210ENST00000566290 TMEM75Q8N9X5 138 aa12.94□□□□□ -0.34
RAB40C-210ENST00000566290 BLNKQ8WV28 456 aa12.94□□□□□ -0.34
RAB40C-210ENST00000566290 ZNF492Q9P255 531 aa12.94□□□□□ -0.34
RAB40C-210ENST00000566290 URGCP-MRPS24S4R325 110 aa12.94□□□□□ -0.34
RAB40C-210ENST00000566290 S4R3C0 116 aa12.94□□□□□ -0.34
RAB40C-210ENST00000566290 PGPEP1LA6NFU8 196 aa12.93□□□□□ -0.34
RAB40C-210ENST00000566290 NDUFA4O00483 81 aa12.93□□□□□ -0.34
RAB40C-210ENST00000566290 BUB3O43684 328 aa12.93□□□□□ -0.34
RAB40C-210ENST00000566290 RPS10P46783 165 aaKnown RBP12.93□□□□□ -0.34
RAB40C-210ENST00000566290 Q8N2B8 174 aa12.93□□□□□ -0.34
RAB40C-210ENST00000566290 JMJD8Q96S16 334 aa12.93□□□□□ -0.34
RAB40C-210ENST00000566290 CLEC5AQ9NY25 188 aa12.93□□□□□ -0.34
RAB40C-210ENST00000566290 V9GYV3 84 aa12.93□□□□□ -0.34
RAB40C-210ENST00000566290 KMT2CQ8NEZ4 4911 aaKnown RBP12.93□□□□□ -0.34
RAB40C-210ENST00000566290 CLPSL1A2RUU4 121 aa12.92□□□□□ -0.34
RAB40C-210ENST00000566290 PPP5D1E7EU14 171 aa12.92□□□□□ -0.34
RAB40C-210ENST00000566290 K7EQM0 130 aa12.92□□□□□ -0.34
RAB40C-210ENST00000566290 PHOX2AO14813 284 aa12.92□□□□□ -0.34
RAB40C-210ENST00000566290 HOXA3O43365 443 aaPredicted RBP12.92□□□□□ -0.34
RAB40C-210ENST00000566290 BLCAPP62952 87 aa12.92□□□□□ -0.34
RAB40C-210ENST00000566290 RPL19P84098 196 aaKnown RBP12.92□□□□□ -0.34
RAB40C-210ENST00000566290 COX19Q49B96 90 aa12.92□□□□□ -0.34
RAB40C-210ENST00000566290 CT83Q5H943 113 aa12.92□□□□□ -0.34
RAB40C-210ENST00000566290 C9orf152Q5JTZ5 239 aa12.92□□□□□ -0.34
RAB40C-210ENST00000566290 CLEC19AQ6UXS0 136 aa12.92□□□□□ -0.34
RAB40C-210ENST00000566290 COX8CQ7Z4L0 72 aa12.92□□□□□ -0.34
RAB40C-210ENST00000566290 BAGE2Q86Y30 109 aa12.92□□□□□ -0.34
RAB40C-210ENST00000566290 CMTM2Q8TAZ6 248 aa12.92□□□□□ -0.34
RAB40C-210ENST00000566290 SLC50A1Q9BRV3 221 aa12.92□□□□□ -0.34
RAB40C-210ENST00000566290 AAMDCQ9H7C9 122 aa12.92□□□□□ -0.34
RAB40C-210ENST00000566290 IGHV3-23P01764 117 aa12.91□□□□□ -0.34
RAB40C-210ENST00000566290 PSMB8P28062 276 aa12.91□□□□□ -0.34
RAB40C-210ENST00000566290 TPPP2P59282 170 aa12.91□□□□□ -0.34
RAB40C-210ENST00000566290 Q86TA4 180 aa12.91□□□□□ -0.34
RAB40C-210ENST00000566290 RNF152Q8N8N0 203 aa12.91□□□□□ -0.34
RAB40C-210ENST00000566290 MYOZ3Q8TDC0 251 aa12.91□□□□□ -0.34
RAB40C-210ENST00000566290 MRPL53Q96EL3 112 aaKnown RBP12.91□□□□□ -0.34
RAB40C-210ENST00000566290 METTL26Q96S19 204 aa12.91□□□□□ -0.34
RAB40C-210ENST00000566290 PRSS22Q9GZN4 317 aa12.91□□□□□ -0.34
RAB40C-210ENST00000566290 NPFFR1Q9GZQ6 430 aa12.91□□□□□ -0.34
RAB40C-210ENST00000566290 ZFP30Q9Y2G7 519 aa12.91□□□□□ -0.34
RAB40C-210ENST00000566290 RYR3Q15413 4870 aa12.9□□□□□ -0.34
RAB40C-210ENST00000566290 ERVFC1-1P60608 527 aa12.9□□□□□ -0.34
RAB40C-210ENST00000566290 IBA57Q5T440 356 aaKnown RBP12.9□□□□□ -0.34
RAB40C-210ENST00000566290 TMEM183AQ8IXX5 376 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms