RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 GPX4P36969 197 aaPredicted RBP10.82□□□□□ -0.68
CLK3-217ENST00000566126 TDRG1Q3Y452 100 aa10.82□□□□□ -0.68
CLK3-217ENST00000566126 MORN5Q5VZ52 161 aa10.82□□□□□ -0.68
CLK3-217ENST00000566126 CCDC190Q86UF4 302 aa10.82□□□□□ -0.68
CLK3-217ENST00000566126 ZNF486Q96H40 463 aaPredicted RBP10.82□□□□□ -0.68
CLK3-217ENST00000566126 VGLL1Q99990 258 aa10.82□□□□□ -0.68
CLK3-217ENST00000566126 SDC2P34741 201 aa10.81□□□□□ -0.68
CLK3-217ENST00000566126 RCVRNP35243 200 aa10.81□□□□□ -0.68
CLK3-217ENST00000566126 MXD1Q05195 221 aa10.81□□□□□ -0.68
CLK3-217ENST00000566126 THAP8Q8NA92 274 aa10.81□□□□□ -0.68
CLK3-217ENST00000566126 ZNF680Q8NEM1 530 aa10.81□□□□□ -0.68
CLK3-217ENST00000566126 LHFPL5Q8TAF8 219 aa10.81□□□□□ -0.68
CLK3-217ENST00000566126 TMEM56-RWDD3S4R434 201 aa10.81□□□□□ -0.68
CLK3-217ENST00000566126 U3KQ87 197 aa10.81□□□□□ -0.68
CLK3-217ENST00000566126 RBFOX3A6NFN3 312 aa10.8□□□□□ -0.68
CLK3-217ENST00000566126 ORM2P19652 201 aa10.8□□□□□ -0.68
CLK3-217ENST00000566126 MEF2DQ14814 521 aa10.8□□□□□ -0.68
CLK3-217ENST00000566126 TMEM182Q6ZP80 229 aaPredicted RBP10.8□□□□□ -0.68
CLK3-217ENST00000566126 ZNF431Q8TF32 576 aaPredicted RBP10.8□□□□□ -0.68
CLK3-217ENST00000566126 BLNKQ8WV28 456 aa10.8□□□□□ -0.68
CLK3-217ENST00000566126 TM2D2Q9BX73 214 aa10.8□□□□□ -0.68
CLK3-217ENST00000566126 MRPL16Q9NX20 251 aaKnown RBP10.8□□□□□ -0.68
CLK3-217ENST00000566126 A0A087X0K7 114 aa10.79□□□□□ -0.68
CLK3-217ENST00000566126 PRAC2D3DTV9 90 aa10.79□□□□□ -0.68
CLK3-217ENST00000566126 CFDP00746 253 aaPredicted RBP10.79□□□□□ -0.68
CLK3-217ENST00000566126 TNFSF8P32971 234 aa10.79□□□□□ -0.68
CLK3-217ENST00000566126 TCL1AP56279 114 aa10.79□□□□□ -0.68
CLK3-217ENST00000566126 GGNBP1Q5YKI7 109 aa10.79□□□□□ -0.68
CLK3-217ENST00000566126 TEPPQ6URK8 271 aa10.79□□□□□ -0.68
CLK3-217ENST00000566126 LGI3Q8N145 548 aa10.79□□□□□ -0.68
CLK3-217ENST00000566126 TMEM37Q8WXS4 190 aa10.79□□□□□ -0.68
CLK3-217ENST00000566126 PAXXQ9BUH6 204 aa10.79□□□□□ -0.68
CLK3-217ENST00000566126 LINC00854A0A1B0GVQ3 168 aa10.78□□□□□ -0.68
CLK3-217ENST00000566126 H3BRN7 92 aa10.78□□□□□ -0.68
CLK3-217ENST00000566126 CDS2O95674 445 aa10.78□□□□□ -0.68
CLK3-217ENST00000566126 PRSS3P35030 304 aa10.78□□□□□ -0.68
CLK3-217ENST00000566126 TMEM147Q9BVK8 224 aa10.78□□□□□ -0.68
CLK3-217ENST00000566126 IGHV3-30P01768 117 aa10.77□□□□□ -0.69
CLK3-217ENST00000566126 IGHV3-33P01772 117 aa10.77□□□□□ -0.69
CLK3-217ENST00000566126 CT45A10P0DMU9 189 aa10.77□□□□□ -0.69
CLK3-217ENST00000566126 IGHV3-30-3P0DP02 117 aa10.77□□□□□ -0.69
CLK3-217ENST00000566126 IGHV3-30-5P0DP03 117 aa10.77□□□□□ -0.69
CLK3-217ENST00000566126 RPL7P18124 248 aaKnown RBP10.77□□□□□ -0.69
CLK3-217ENST00000566126 ANXA2RQ3ZCQ2 193 aa10.77□□□□□ -0.69
CLK3-217ENST00000566126 C9orf47Q6ZRZ4 202 aa10.77□□□□□ -0.69
CLK3-217ENST00000566126 LHFPL1Q86WI0 220 aa10.77□□□□□ -0.69
CLK3-217ENST00000566126 GPX8Q8TED1 209 aa10.77□□□□□ -0.69
CLK3-217ENST00000566126 PCNPQ8WW12 178 aaKnown RBP10.77□□□□□ -0.69
CLK3-217ENST00000566126 BAALCQ8WXS3 180 aa10.77□□□□□ -0.69
CLK3-217ENST00000566126 S100A16Q96FQ6 103 aaKnown RBP10.77□□□□□ -0.69
CLK3-217ENST00000566126 TRGV4A0A0C4DH28 118 aa10.76□□□□□ -0.69
CLK3-217ENST00000566126 LAGE3Q14657 143 aa10.76□□□□□ -0.69
CLK3-217ENST00000566126 STEAP1BQ6NZ63 245 aa10.76□□□□□ -0.69
CLK3-217ENST00000566126 SELENOHQ8IZQ5 122 aaKnown RBP10.76□□□□□ -0.69
CLK3-217ENST00000566126 DTD1Q8TEA8 209 aa10.76□□□□□ -0.69
CLK3-217ENST00000566126 TXNDC17Q9BRA2 123 aa10.76□□□□□ -0.69
CLK3-217ENST00000566126 SHANK2-AS3Q9BTD1 123 aa10.76□□□□□ -0.69
CLK3-217ENST00000566126 TMEM222Q9H0R3 208 aa10.76□□□□□ -0.69
CLK3-217ENST00000566126 COPZ2Q9P299 210 aa10.76□□□□□ -0.69
CLK3-217ENST00000566126 ORM1P02763 201 aa10.75□□□□□ -0.69
CLK3-217ENST00000566126 SFTA3P0C7M3 94 aa10.75□□□□□ -0.69
CLK3-217ENST00000566126 TIRAPP58753 221 aa10.75□□□□□ -0.69
CLK3-217ENST00000566126 IQCF2Q8IXL9 164 aa10.75□□□□□ -0.69
CLK3-217ENST00000566126 EIF4E3Q8N5X7 224 aaKnown RBP10.75□□□□□ -0.69
CLK3-217ENST00000566126 BPIFCQ8NFQ6 507 aa10.75□□□□□ -0.69
CLK3-217ENST00000566126 LRRC20Q8TCA0 184 aa10.75□□□□□ -0.69
CLK3-217ENST00000566126 GLYATL2Q8WU03 294 aa10.75□□□□□ -0.69
CLK3-217ENST00000566126 LEPP41159 167 aa10.74□□□□□ -0.69
CLK3-217ENST00000566126 GPR107Q5VW38 600 aa10.74□□□□□ -0.69
CLK3-217ENST00000566126 ZBTB8BQ8NAP8 495 aaPredicted RBP10.74□□□□□ -0.69
CLK3-217ENST00000566126 RBKSQ9H477 322 aa10.74□□□□□ -0.69
CLK3-217ENST00000566126 ZNF331Q9NQX6 463 aaPredicted RBP10.74□□□□□ -0.69
CLK3-217ENST00000566126 LOC100131303A0A0U1RQF7 123 aa10.73□□□□□ -0.69
CLK3-217ENST00000566126 MRPS12O15235 138 aaKnown RBP10.73□□□□□ -0.69
CLK3-217ENST00000566126 S100A7P31151 101 aa10.73□□□□□ -0.69
CLK3-217ENST00000566126 ZNF846Q147U1 533 aa10.73□□□□□ -0.69
CLK3-217ENST00000566126 CCDC71LQ8N9Z2 235 aa10.73□□□□□ -0.69
CLK3-217ENST00000566126 ZNF479Q96JC4 524 aa10.73□□□□□ -0.69
CLK3-217ENST00000566126 ODF3Q96PU9 254 aa10.73□□□□□ -0.69
CLK3-217ENST00000566126 SLC25A31Q9H0C2 315 aa10.73□□□□□ -0.69
CLK3-217ENST00000566126 HSPB7Q9UBY9 170 aa10.73□□□□□ -0.69
CLK3-217ENST00000566126 TP53TG3Q9ULZ0 132 aa10.73□□□□□ -0.69
CLK3-217ENST00000566126 RNF222A6NCQ9 220 aa10.72□□□□□ -0.69
CLK3-217ENST00000566126 B3GALNT1O75752 331 aa10.72□□□□□ -0.69
CLK3-217ENST00000566126 ATP5IP56385 69 aaPredicted RBP10.72□□□□□ -0.69
CLK3-217ENST00000566126 IBA57Q5T440 356 aaKnown RBP10.72□□□□□ -0.69
CLK3-217ENST00000566126 LCE2AQ5TA79 106 aaPredicted RBP10.72□□□□□ -0.69
CLK3-217ENST00000566126 OR1S1Q8NH92 325 aa10.72□□□□□ -0.69
CLK3-217ENST00000566126 SSR3Q9UNL2 185 aa10.72□□□□□ -0.69
CLK3-217ENST00000566126 C7orf71A4D174 169 aa10.71□□□□□ -0.69
CLK3-217ENST00000566126 SULT1A3P0DMM9 295 aa10.71□□□□□ -0.69
CLK3-217ENST00000566126 SULT1A4P0DMN0 295 aa10.71□□□□□ -0.69
CLK3-217ENST00000566126 PPT1P50897 306 aa10.71□□□□□ -0.69
CLK3-217ENST00000566126 UBE2NLQ5JXB2 153 aa10.71□□□□□ -0.69
CLK3-217ENST00000566126 TMEM268Q5VZI3 342 aa10.71□□□□□ -0.69
CLK3-217ENST00000566126 LINC01600Q96MT4 127 aa10.71□□□□□ -0.69
CLK3-217ENST00000566126 TRAV8-6A0A0B4J262 113 aa10.7□□□□□ -0.7
CLK3-217ENST00000566126 TEX13DA0A0J9YY54 714 aaPredicted RBP10.7□□□□□ -0.7
CLK3-217ENST00000566126 PMS2P5A8MQ11 134 aa10.7□□□□□ -0.7
CLK3-217ENST00000566126 C9JCJ5 164 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms