RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 PDE6HQ13956 83 aa9.28□□□□□ -0.92
SHCBP1-204ENST00000565887 TRPT1Q86TN4 253 aaKnown RBP9.28□□□□□ -0.92
SHCBP1-204ENST00000565887 OR2G3Q8NGZ4 309 aa9.28□□□□□ -0.92
SHCBP1-204ENST00000565887 RCHY1Q96PM5 261 aa9.28□□□□□ -0.92
SHCBP1-204ENST00000565887 SAV1Q9H4B6 383 aaPredicted RBP9.28□□□□□ -0.92
SHCBP1-204ENST00000565887 HLA-DRB4X5D2U9 266 aa9.28□□□□□ -0.92
SHCBP1-204ENST00000565887 TRAV5A0A0B4J249 113 aa9.27□□□□□ -0.93
SHCBP1-204ENST00000565887 KNCNA6PVL3 124 aa9.27□□□□□ -0.93
SHCBP1-204ENST00000565887 G3V3Q6 166 aa9.27□□□□□ -0.93
SHCBP1-204ENST00000565887 SPRY2O43597 315 aa9.27□□□□□ -0.93
SHCBP1-204ENST00000565887 IGLC2P0DOY2 106 aa9.27□□□□□ -0.93
SHCBP1-204ENST00000565887 EIF5AP63241 154 aaKnown RBP9.27□□□□□ -0.93
SHCBP1-204ENST00000565887 ZNF124Q15973 351 aa9.27□□□□□ -0.93
SHCBP1-204ENST00000565887 PSG3Q16557 428 aa9.27□□□□□ -0.93
SHCBP1-204ENST00000565887 MORN5Q5VZ52 161 aa9.27□□□□□ -0.93
SHCBP1-204ENST00000565887 TCTE3Q8IZS6 198 aa9.27□□□□□ -0.93
SHCBP1-204ENST00000565887 KCNRGQ8N5I3 272 aa9.27□□□□□ -0.93
SHCBP1-204ENST00000565887 HSD17B11Q8NBQ5 300 aa9.27□□□□□ -0.93
SHCBP1-204ENST00000565887 C17orf77Q96MU5 243 aa9.27□□□□□ -0.93
SHCBP1-204ENST00000565887 OR51M1Q9H341 326 aa9.27□□□□□ -0.93
SHCBP1-204ENST00000565887 ZNF331Q9NQX6 463 aaPredicted RBP9.27□□□□□ -0.93
SHCBP1-204ENST00000565887 PRELID1Q9Y255 219 aa9.27□□□□□ -0.93
SHCBP1-204ENST00000565887 COL7A1Q02388 2944 aa9.27□□□□□ -0.93
SHCBP1-204ENST00000565887 NBEAP1P0C6P0 100 aa9.26□□□□□ -0.93
SHCBP1-204ENST00000565887 ATP6V0CP27449 155 aa9.26□□□□□ -0.93
SHCBP1-204ENST00000565887 KHDC3LQ587J8 217 aa9.26□□□□□ -0.93
SHCBP1-204ENST00000565887 GCSAMLQ5JQS6 135 aa9.26□□□□□ -0.93
SHCBP1-204ENST00000565887 PQLC2Q6ZP29 291 aa9.26□□□□□ -0.93
SHCBP1-204ENST00000565887 OR10G4Q8NGN3 311 aa9.26□□□□□ -0.93
SHCBP1-204ENST00000565887 OR10G9Q8NGN4 311 aa9.26□□□□□ -0.93
SHCBP1-204ENST00000565887 OR10G7Q8NGN6 311 aa9.26□□□□□ -0.93
SHCBP1-204ENST00000565887 RNF183Q96D59 192 aa9.26□□□□□ -0.93
SHCBP1-204ENST00000565887 SAT2Q96F10 170 aaPredicted RBP9.26□□□□□ -0.93
SHCBP1-204ENST00000565887 ARPC5LQ9BPX5 153 aa9.26□□□□□ -0.93
SHCBP1-204ENST00000565887 PAXXQ9BUH6 204 aa9.26□□□□□ -0.93
SHCBP1-204ENST00000565887 NBEAL2Q6ZNJ1 2754 aa9.25□□□□□ -0.93
SHCBP1-204ENST00000565887 TRBV19A0A075B6N1 114 aa9.25□□□□□ -0.93
SHCBP1-204ENST00000565887 TRAV8-2A0A0B4J237 113 aa9.25□□□□□ -0.93
SHCBP1-204ENST00000565887 A0A0J9YX75 114 aa9.25□□□□□ -0.93
SHCBP1-204ENST00000565887 KANTRA0A1W2PQU2 76 aa9.25□□□□□ -0.93
SHCBP1-204ENST00000565887 H3BQ15 152 aa9.25□□□□□ -0.93
SHCBP1-204ENST00000565887 CA1P00915 261 aaPredicted RBP9.25□□□□□ -0.93
SHCBP1-204ENST00000565887 RPL7L1Q6DKI1 246 aaKnown RBP9.25□□□□□ -0.93
SHCBP1-204ENST00000565887 MIR17HGQ75NE6 70 aa9.25□□□□□ -0.93
SHCBP1-204ENST00000565887 LYPD1Q8N2G4 141 aa9.25□□□□□ -0.93
SHCBP1-204ENST00000565887 ZNF738Q8NE65 137 aa9.25□□□□□ -0.93
SHCBP1-204ENST00000565887 RNF141Q8WVD5 230 aa9.25□□□□□ -0.93
SHCBP1-204ENST00000565887 MRPL53Q96EL3 112 aaKnown RBP9.25□□□□□ -0.93
SHCBP1-204ENST00000565887 ST6GAL2Q96JF0 529 aa9.25□□□□□ -0.93
SHCBP1-204ENST00000565887 FAM167A-AS1Q96KT0 104 aa9.25□□□□□ -0.93
SHCBP1-204ENST00000565887 WWC2-AS2Q96NR7 200 aa9.25□□□□□ -0.93
SHCBP1-204ENST00000565887 SLC25A2Q9BXI2 301 aa9.25□□□□□ -0.93
SHCBP1-204ENST00000565887 AAMDCQ9H7C9 122 aa9.25□□□□□ -0.93
SHCBP1-204ENST00000565887 SMLR1H3BR10 107 aa9.24□□□□□ -0.93
SHCBP1-204ENST00000565887 OR7C2O60412 319 aa9.24□□□□□ -0.93
SHCBP1-204ENST00000565887 AMBPP02760 352 aa9.24□□□□□ -0.93
SHCBP1-204ENST00000565887 AKAP14Q86UN6 197 aa9.24□□□□□ -0.93
SHCBP1-204ENST00000565887 OR4B1Q8NGF8 309 aa9.24□□□□□ -0.93
SHCBP1-204ENST00000565887 C20orf173Q96LM9 149 aa9.24□□□□□ -0.93
SHCBP1-204ENST00000565887 HYLS1Q96M11 299 aa9.24□□□□□ -0.93
SHCBP1-204ENST00000565887 OVOL2Q9BRP0 275 aa9.24□□□□□ -0.93
SHCBP1-204ENST00000565887 ZNF586Q9NXT0 402 aa9.24□□□□□ -0.93
SHCBP1-204ENST00000565887 A8MTW9 85 aa9.23□□□□□ -0.93
SHCBP1-204ENST00000565887 C1QBP02746 253 aa9.23□□□□□ -0.93
SHCBP1-204ENST00000565887 C4BPBP20851 252 aa9.23□□□□□ -0.93
SHCBP1-204ENST00000565887 OR11H4Q8NGC9 324 aa9.23□□□□□ -0.93
SHCBP1-204ENST00000565887 OR8A1Q8NGG7 326 aa9.23□□□□□ -0.93
SHCBP1-204ENST00000565887 OR10J6PQ8NGY7 276 aa9.23□□□□□ -0.93
SHCBP1-204ENST00000565887 IL17DQ8TAD2 202 aa9.23□□□□□ -0.93
SHCBP1-204ENST00000565887 RPUSD4Q96CM3 377 aaKnown RBP9.23□□□□□ -0.93
SHCBP1-204ENST00000565887 ACTR3CQ9C0K3 210 aaPredicted RBP9.23□□□□□ -0.93
SHCBP1-204ENST00000565887 PPP1R14DQ9NXH3 145 aa9.23□□□□□ -0.93
SHCBP1-204ENST00000565887 PFDN1O60925 122 aa9.22□□□□□ -0.93
SHCBP1-204ENST00000565887 PYYP10082 97 aa9.22□□□□□ -0.93
SHCBP1-204ENST00000565887 CDC34P49427 236 aaPredicted RBP9.22□□□□□ -0.93
SHCBP1-204ENST00000565887 DEFB135Q30KP9 77 aa9.22□□□□□ -0.93
SHCBP1-204ENST00000565887 FAM74A1Q5RGS3 127 aa9.22□□□□□ -0.93
SHCBP1-204ENST00000565887 AKR1C8PQ5T2L2 129 aa9.22□□□□□ -0.93
SHCBP1-204ENST00000565887 IGFL4Q6B9Z1 124 aa9.22□□□□□ -0.93
SHCBP1-204ENST00000565887 RNF182Q8N6D2 247 aa9.22□□□□□ -0.93
SHCBP1-204ENST00000565887 ARL6IP6Q8N6S5 226 aa9.22□□□□□ -0.93
SHCBP1-204ENST00000565887 BLNKQ8WV28 456 aa9.22□□□□□ -0.93
SHCBP1-204ENST00000565887 RARRES2Q99969 163 aa9.22□□□□□ -0.93
SHCBP1-204ENST00000565887 CYTL1Q9NRR1 136 aa9.22□□□□□ -0.93
SHCBP1-204ENST00000565887 AGRNO00468 2067 aa9.22□□□□□ -0.93
SHCBP1-204ENST00000565887 BCL2L11O43521 198 aa9.21□□□□□ -0.94
SHCBP1-204ENST00000565887 SEC11BP0C7V7 166 aa9.21□□□□□ -0.94
SHCBP1-204ENST00000565887 CSN1S1P47710 185 aa9.21□□□□□ -0.94
SHCBP1-204ENST00000565887 RAB2AP61019 212 aa9.21□□□□□ -0.94
SHCBP1-204ENST00000565887 GDF5OSQ5U4N7 250 aa9.21□□□□□ -0.94
SHCBP1-204ENST00000565887 EIF5AL1Q6IS14 154 aaKnown RBP9.21□□□□□ -0.94
SHCBP1-204ENST00000565887 FAM122CQ6P4D5 195 aa9.21□□□□□ -0.94
SHCBP1-204ENST00000565887 TMUB2Q71RG4 321 aa9.21□□□□□ -0.94
SHCBP1-204ENST00000565887 RPP25LQ8N5L8 163 aaKnown RBP9.21□□□□□ -0.94
SHCBP1-204ENST00000565887 FXYD5Q96DB9 178 aa9.21□□□□□ -0.94
SHCBP1-204ENST00000565887 UMAD1C9J7I0 102 aa9.2□□□□□ -0.94
SHCBP1-204ENST00000565887 SLC17A3O00476 420 aa9.2□□□□□ -0.94
SHCBP1-204ENST00000565887 NDUFB4O95168 129 aa9.2□□□□□ -0.94
SHCBP1-204ENST00000565887 CXorf1O96002 111 aa9.2□□□□□ -0.94
SHCBP1-204ENST00000565887 SNRPCP09234 159 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms