RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 H3BTX0 84 aa8.4□□□□□ -1.06
SF3B3-205ENST00000564899 NBEAP1P0C6P0 100 aa8.4□□□□□ -1.06
SF3B3-205ENST00000564899 IGLC2P0DOY2 106 aa8.4□□□□□ -1.06
SF3B3-205ENST00000564899 BCL2P10415 239 aa8.4□□□□□ -1.06
SF3B3-205ENST00000564899 FOLR2P14207 255 aa8.4□□□□□ -1.06
SF3B3-205ENST00000564899 CBLN1P23435 193 aa8.4□□□□□ -1.06
SF3B3-205ENST00000564899 UBE2G2P60604 165 aa8.4□□□□□ -1.06
SF3B3-205ENST00000564899 PMS2P11Q13670 270 aa8.4□□□□□ -1.06
SF3B3-205ENST00000564899 NDUFA5Q16718 116 aa8.4□□□□□ -1.06
SF3B3-205ENST00000564899 GUK1Q16774 197 aa8.4□□□□□ -1.06
SF3B3-205ENST00000564899 SIGLEC15Q6ZMC9 328 aa8.4□□□□□ -1.06
SF3B3-205ENST00000564899 SUN5Q8TC36 379 aa8.4□□□□□ -1.06
SF3B3-205ENST00000564899 BLNKQ8WV28 456 aa8.4□□□□□ -1.06
SF3B3-205ENST00000564899 FAM210AQ96ND0 272 aa8.4□□□□□ -1.06
SF3B3-205ENST00000564899 DYNC2H1Q8NCM8 4307 aaKnown RBP8.4□□□□□ -1.06
SF3B3-205ENST00000564899 A0A087X0K7 114 aa8.39□□□□□ -1.07
SF3B3-205ENST00000564899 LOC102723971A0A1B0GUV8 181 aa8.39□□□□□ -1.07
SF3B3-205ENST00000564899 RAB19A4D1S5 217 aa8.39□□□□□ -1.07
SF3B3-205ENST00000564899 HELTA6NFD8 242 aa8.39□□□□□ -1.07
SF3B3-205ENST00000564899 RBFOX3A6NFN3 312 aa8.39□□□□□ -1.07
SF3B3-205ENST00000564899 ZNF785A8K8V0 405 aa8.39□□□□□ -1.07
SF3B3-205ENST00000564899 PAGE4O60829 102 aa8.39□□□□□ -1.07
SF3B3-205ENST00000564899 TCF24Q7RTU0 167 aa8.39□□□□□ -1.07
SF3B3-205ENST00000564899 DYNLRB2Q8TF09 96 aa8.39□□□□□ -1.07
SF3B3-205ENST00000564899 EIF5A2Q9GZV4 153 aaKnown RBP8.39□□□□□ -1.07
SF3B3-205ENST00000564899 ZNF586Q9NXT0 402 aa8.39□□□□□ -1.07
SF3B3-205ENST00000564899 SELENOKQ9Y6D0 94 aa8.39□□□□□ -1.07
SF3B3-205ENST00000564899 SMAD5-AS1Q9Y6J3 95 aa8.39□□□□□ -1.07
SF3B3-205ENST00000564899 ARL2-SNX15V9GYD0 113 aa8.39□□□□□ -1.07
SF3B3-205ENST00000564899 SACSQ9NZJ4 4579 aa8.38□□□□□ -1.07
SF3B3-205ENST00000564899 TRBV19A0A075B6N1 114 aa8.38□□□□□ -1.07
SF3B3-205ENST00000564899 FAM74A7A6NL05 159 aa8.38□□□□□ -1.07
SF3B3-205ENST00000564899 CSN3P07498 182 aa8.38□□□□□ -1.07
SF3B3-205ENST00000564899 TAGLN2P37802 199 aaKnown RBP8.38□□□□□ -1.07
SF3B3-205ENST00000564899 RPL11P62913 178 aaKnown RBP8.38□□□□□ -1.07
SF3B3-205ENST00000564899 ICAM4Q14773 271 aa8.38□□□□□ -1.07
SF3B3-205ENST00000564899 ZNF506Q5JVG8 444 aa8.38□□□□□ -1.07
SF3B3-205ENST00000564899 CST9LP1Q5W188 147 aa8.38□□□□□ -1.07
SF3B3-205ENST00000564899 ADAMTSL5Q6ZMM2 481 aa8.38□□□□□ -1.07
SF3B3-205ENST00000564899 LINC00482Q8N8I6 264 aa8.38□□□□□ -1.07
SF3B3-205ENST00000564899 RXFP4Q8TDU9 374 aa8.38□□□□□ -1.07
SF3B3-205ENST00000564899 RARRES2Q99969 163 aa8.38□□□□□ -1.07
SF3B3-205ENST00000564899 MLXQ9UH92 298 aa8.38□□□□□ -1.07
SF3B3-205ENST00000564899 VAX2Q9UIW0 290 aa8.38□□□□□ -1.07
SF3B3-205ENST00000564899 YTHDF2Q9Y5A9 579 aaKnown RBP8.38□□□□□ -1.07
SF3B3-205ENST00000564899 A0A1W2PRE2 83 aa8.37□□□□□ -1.07
SF3B3-205ENST00000564899 C11orf94C9JXX5 98 aa8.37□□□□□ -1.07
SF3B3-205ENST00000564899 SLC17A3O00476 420 aa8.37□□□□□ -1.07
SF3B3-205ENST00000564899 ATP5G3P48201 142 aa8.37□□□□□ -1.07
SF3B3-205ENST00000564899 MEOX2P50222 304 aa8.37□□□□□ -1.07
SF3B3-205ENST00000564899 RANP62826 216 aaKnown RBP8.37□□□□□ -1.07
SF3B3-205ENST00000564899 SRSF3P84103 164 aaKnown RBP8.37□□□□□ -1.07
SF3B3-205ENST00000564899 MEF2BQ02080 365 aaPredicted RBP8.37□□□□□ -1.07
SF3B3-205ENST00000564899 PDE6HQ13956 83 aa8.37□□□□□ -1.07
SF3B3-205ENST00000564899 PEA15Q15121 130 aa8.37□□□□□ -1.07
SF3B3-205ENST00000564899 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.37□□□□□ -1.07
SF3B3-205ENST00000564899 SLC7A5P1Q8MH63 180 aa8.37□□□□□ -1.07
SF3B3-205ENST00000564899 C17orf77Q96MU5 243 aa8.37□□□□□ -1.07
SF3B3-205ENST00000564899 TREM1Q9NP99 234 aa8.37□□□□□ -1.07
SF3B3-205ENST00000564899 IGKV3-7A0A075B6H7 116 aa8.36□□□□□ -1.07
SF3B3-205ENST00000564899 GGTLC3B5MD39 225 aa8.36□□□□□ -1.07
SF3B3-205ENST00000564899 ZNF253O75346 499 aa8.36□□□□□ -1.07
SF3B3-205ENST00000564899 NDUFB4O95168 129 aa8.36□□□□□ -1.07
SF3B3-205ENST00000564899 CD5P06127 495 aa8.36□□□□□ -1.07
SF3B3-205ENST00000564899 PSG9Q00887 426 aa8.36□□□□□ -1.07
SF3B3-205ENST00000564899 KPRPQ5T749 579 aaPredicted RBP8.36□□□□□ -1.07
SF3B3-205ENST00000564899 SAMD5Q5TGI4 173 aa8.36□□□□□ -1.07
SF3B3-205ENST00000564899 FAM90A2PQ658T7 463 aa8.36□□□□□ -1.07
SF3B3-205ENST00000564899 UQCC3Q6UW78 93 aa8.36□□□□□ -1.07
SF3B3-205ENST00000564899 NKX6-2Q9C056 277 aaPredicted RBP8.36□□□□□ -1.07
SF3B3-205ENST00000564899 Q9H3A6 140 aa8.36□□□□□ -1.07
SF3B3-205ENST00000564899 NRN1Q9NPD7 142 aa8.36□□□□□ -1.07
SF3B3-205ENST00000564899 OTORQ9NRC9 128 aa8.36□□□□□ -1.07
SF3B3-205ENST00000564899 SIGLEC8Q9NYZ4 499 aa8.36□□□□□ -1.07
SF3B3-205ENST00000564899 SAP30O75446 220 aa8.35□□□□□ -1.07
SF3B3-205ENST00000564899 CD81P60033 236 aa8.35□□□□□ -1.07
SF3B3-205ENST00000564899 SUMO1P63165 101 aaKnown RBP8.35□□□□□ -1.07
SF3B3-205ENST00000564899 LYPD1Q8N2G4 141 aa8.35□□□□□ -1.07
SF3B3-205ENST00000564899 EIF4E3Q8N5X7 224 aaKnown RBP8.35□□□□□ -1.07
SF3B3-205ENST00000564899 C16orf92Q96LL3 132 aa8.35□□□□□ -1.07
SF3B3-205ENST00000564899 CITED4Q96RK1 184 aa8.35□□□□□ -1.07
SF3B3-205ENST00000564899 TXNDC17Q9BRA2 123 aa8.35□□□□□ -1.07
SF3B3-205ENST00000564899 SLC50A1Q9BRV3 221 aa8.35□□□□□ -1.07
SF3B3-205ENST00000564899 AAMDCQ9H7C9 122 aa8.35□□□□□ -1.07
SF3B3-205ENST00000564899 ZNF331Q9NQX6 463 aaPredicted RBP8.35□□□□□ -1.07
SF3B3-205ENST00000564899 PGPA6NDG6 321 aa8.34□□□□□ -1.07
SF3B3-205ENST00000564899 C9JQL5 133 aa8.34□□□□□ -1.07
SF3B3-205ENST00000564899 SLC25A5P05141 298 aaKnown RBP8.34□□□□□ -1.07
SF3B3-205ENST00000564899 DEFB114Q30KQ6 69 aa8.34□□□□□ -1.07
SF3B3-205ENST00000564899 RBPMS2Q6ZRY4 209 aaKnown RBP8.34□□□□□ -1.07
SF3B3-205ENST00000564899 CCDC28AQ8IWP9 274 aa8.34□□□□□ -1.07
SF3B3-205ENST00000564899 EXOC3-AS1Q8N2X6 119 aa8.34□□□□□ -1.07
SF3B3-205ENST00000564899 GBGT1Q8N5D6 347 aa8.34□□□□□ -1.07
SF3B3-205ENST00000564899 MS4A6AQ9H2W1 248 aa8.34□□□□□ -1.07
SF3B3-205ENST00000564899 SMDT1Q9H4I9 107 aa8.34□□□□□ -1.07
SF3B3-205ENST00000564899 TRAV8-2A0A0B4J237 113 aa8.33□□□□□ -1.08
SF3B3-205ENST00000564899 SCO2A0A1W2PP80 73 aa8.33□□□□□ -1.08
SF3B3-205ENST00000564899 F6UZH7 168 aa8.33□□□□□ -1.08
SF3B3-205ENST00000564899 DNASE2O00115 360 aaPredicted RBP8.33□□□□□ -1.08
SF3B3-205ENST00000564899 SOCS3O14543 225 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms