RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 C15orf53Q8NAA6 179 aa10.65□□□□□ -0.7
SPG7-210ENST00000564409 SLC50A1Q9BRV3 221 aa10.65□□□□□ -0.7
SPG7-210ENST00000564409 KRTAP17-1Q9BYP8 105 aa10.65□□□□□ -0.7
SPG7-210ENST00000564409 C20orf85Q9H1P6 137 aa10.65□□□□□ -0.7
SPG7-210ENST00000564409 PPP1R14DQ9NXH3 145 aa10.65□□□□□ -0.7
SPG7-210ENST00000564409 LYRM1O43325 122 aa10.64□□□□□ -0.71
SPG7-210ENST00000564409 RHOBP62745 196 aa10.64□□□□□ -0.71
SPG7-210ENST00000564409 SLC38A11Q08AI6 406 aa10.64□□□□□ -0.71
SPG7-210ENST00000564409 IGFL4Q6B9Z1 124 aa10.64□□□□□ -0.71
SPG7-210ENST00000564409 PATE2Q6UY27 113 aa10.64□□□□□ -0.71
SPG7-210ENST00000564409 LINC00305Q7Z4B0 112 aa10.64□□□□□ -0.71
SPG7-210ENST00000564409 BPIFA4PQ86YQ2 179 aa10.64□□□□□ -0.71
SPG7-210ENST00000564409 VPS13DQ5THJ4 4388 aa10.64□□□□□ -0.71
SPG7-210ENST00000564409 MRPS12O15235 138 aaKnown RBP10.63□□□□□ -0.71
SPG7-210ENST00000564409 PLA2G10O15496 165 aa10.63□□□□□ -0.71
SPG7-210ENST00000564409 TCRBP04435 133 aa10.63□□□□□ -0.71
SPG7-210ENST00000564409 HTN3P15516 51 aa10.63□□□□□ -0.71
SPG7-210ENST00000564409 HIST1H1AQ02539 215 aaPredicted RBP10.63□□□□□ -0.71
SPG7-210ENST00000564409 RPUSD4Q96CM3 377 aaKnown RBP10.63□□□□□ -0.71
SPG7-210ENST00000564409 C20orf144Q9BQM9 153 aa10.63□□□□□ -0.71
SPG7-210ENST00000564409 HECTD4Q9Y4D8 3996 aa10.63□□□□□ -0.71
SPG7-210ENST00000564409 ZNF705GA8MUZ8 300 aaPredicted RBP10.62□□□□□ -0.71
SPG7-210ENST00000564409 COX7A2P2O60397 106 aa10.62□□□□□ -0.71
SPG7-210ENST00000564409 PVALBP20472 110 aaPredicted RBP10.62□□□□□ -0.71
SPG7-210ENST00000564409 CDKN1BP46527 198 aa10.62□□□□□ -0.71
SPG7-210ENST00000564409 TAS2R60P59551 318 aa10.62□□□□□ -0.71
SPG7-210ENST00000564409 C10orf113Q5VZT2 155 aa10.62□□□□□ -0.71
SPG7-210ENST00000564409 ZNF493Q6ZR52 646 aa10.62□□□□□ -0.71
SPG7-210ENST00000564409 Q6ZRG5 221 aa10.62□□□□□ -0.71
SPG7-210ENST00000564409 BAP18Q8IXM2 172 aa10.62□□□□□ -0.71
SPG7-210ENST00000564409 ZNF431Q8TF32 576 aaPredicted RBP10.62□□□□□ -0.71
SPG7-210ENST00000564409 DNAJC4Q9NNZ3 241 aa10.62□□□□□ -0.71
SPG7-210ENST00000564409 ZNF331Q9NQX6 463 aaPredicted RBP10.62□□□□□ -0.71
SPG7-210ENST00000564409 PLA2G2EQ9NZK7 142 aa10.62□□□□□ -0.71
SPG7-210ENST00000564409 PXMP4Q9Y6I8 212 aa10.62□□□□□ -0.71
SPG7-210ENST00000564409 NACAE9PAV3 2078 aa10.62□□□□□ -0.71
SPG7-210ENST00000564409 ARL16Q0P5N6 197 aa10.61□□□□□ -0.71
SPG7-210ENST00000564409 GUK1Q16774 197 aa10.61□□□□□ -0.71
SPG7-210ENST00000564409 SOHLH1Q5JUK2 328 aa10.61□□□□□ -0.71
SPG7-210ENST00000564409 TMEM88Q6PEY1 159 aa10.61□□□□□ -0.71
SPG7-210ENST00000564409 Q6ZR54 194 aa10.61□□□□□ -0.71
SPG7-210ENST00000564409 LINC00299Q6ZSB3 139 aa10.61□□□□□ -0.71
SPG7-210ENST00000564409 C16orf74Q96GX8 76 aa10.61□□□□□ -0.71
SPG7-210ENST00000564409 LINC01587Q99440 93 aa10.61□□□□□ -0.71
SPG7-210ENST00000564409 MGST2Q99735 147 aa10.61□□□□□ -0.71
SPG7-210ENST00000564409 CCDC32Q9BV29 185 aa10.61□□□□□ -0.71
SPG7-210ENST00000564409 HERC2O95714 4834 aa10.61□□□□□ -0.71
SPG7-210ENST00000564409 TRAV12-2A0A075B6T6 113 aa10.6□□□□□ -0.71
SPG7-210ENST00000564409 C5orf51A6NDU8 294 aa10.6□□□□□ -0.71
SPG7-210ENST00000564409 CAMLGP49069 296 aa10.6□□□□□ -0.71
SPG7-210ENST00000564409 BCAP31P51572 246 aa10.6□□□□□ -0.71
SPG7-210ENST00000564409 C12orf45Q8N5I9 185 aaPredicted RBP10.6□□□□□ -0.71
SPG7-210ENST00000564409 OR1L4Q8NGR5 311 aa10.6□□□□□ -0.71
SPG7-210ENST00000564409 OR10J6PQ8NGY7 276 aa10.6□□□□□ -0.71
SPG7-210ENST00000564409 TMEM37Q8WXS4 190 aa10.6□□□□□ -0.71
SPG7-210ENST00000564409 C2orf50Q96LR7 162 aa10.6□□□□□ -0.71
SPG7-210ENST00000564409 PFDN5Q99471 154 aa10.6□□□□□ -0.71
SPG7-210ENST00000564409 NUDT15Q9NV35 164 aa10.6□□□□□ -0.71
SPG7-210ENST00000564409 TIMM8BQ9Y5J9 83 aaPredicted RBP10.6□□□□□ -0.71
SPG7-210ENST00000564409 A0A1B0GVY2 172 aa10.59□□□□□ -0.71
SPG7-210ENST00000564409 PLAC8L1A1L4L8 177 aa10.59□□□□□ -0.71
SPG7-210ENST00000564409 CBY3A6NI87 242 aa10.59□□□□□ -0.71
SPG7-210ENST00000564409 PRSS29PA6NIE9 313 aa10.59□□□□□ -0.71
SPG7-210ENST00000564409 FAM25EA8MYX2 175 aa10.59□□□□□ -0.71
SPG7-210ENST00000564409 H7BYZ3 331 aa10.59□□□□□ -0.71
SPG7-210ENST00000564409 RTL8CO15255 209 aa10.59□□□□□ -0.71
SPG7-210ENST00000564409 ATP5G1P05496 136 aa10.59□□□□□ -0.71
SPG7-210ENST00000564409 S100A11P31949 105 aa10.59□□□□□ -0.71
SPG7-210ENST00000564409 ATP5G3P48201 142 aa10.59□□□□□ -0.71
SPG7-210ENST00000564409 CAV2P51636 162 aa10.59□□□□□ -0.71
SPG7-210ENST00000564409 CHAC2Q8WUX2 184 aa10.59□□□□□ -0.71
SPG7-210ENST00000564409 UQCC1Q9NVA1 299 aa10.59□□□□□ -0.71
SPG7-210ENST00000564409 WDR83OSQ9Y284 106 aa10.59□□□□□ -0.71
SPG7-210ENST00000564409 LSM5Q9Y4Y9 91 aaKnown RBP10.59□□□□□ -0.71
SPG7-210ENST00000564409 TRAV6A0A075B6T7 132 aa10.58□□□□□ -0.72
SPG7-210ENST00000564409 M0R2N4 97 aa10.58□□□□□ -0.72
SPG7-210ENST00000564409 CCSO14618 274 aa10.58□□□□□ -0.72
SPG7-210ENST00000564409 IGLC2P0DOY2 106 aa10.58□□□□□ -0.72
SPG7-210ENST00000564409 DEFB130BP0DP73 79 aa10.58□□□□□ -0.72
SPG7-210ENST00000564409 DEFB130AP0DP74 79 aa10.58□□□□□ -0.72
SPG7-210ENST00000564409 AZU1P20160 251 aa10.58□□□□□ -0.72
SPG7-210ENST00000564409 HBG1P69891 147 aa10.58□□□□□ -0.72
SPG7-210ENST00000564409 HBG2P69892 147 aa10.58□□□□□ -0.72
SPG7-210ENST00000564409 OPCMLQ14982 345 aa10.58□□□□□ -0.72
SPG7-210ENST00000564409 VWC2Q2TAL6 325 aa10.58□□□□□ -0.72
SPG7-210ENST00000564409 NRARPQ7Z6K4 114 aa10.58□□□□□ -0.72
SPG7-210ENST00000564409 TMEM263Q8WUH6 116 aaKnown RBP10.58□□□□□ -0.72
SPG7-210ENST00000564409 ODF3Q96PU9 254 aa10.58□□□□□ -0.72
SPG7-210ENST00000564409 C11orf1Q9H5F2 150 aa10.58□□□□□ -0.72
SPG7-210ENST00000564409 LYRM2Q9NU23 88 aaPredicted RBP10.58□□□□□ -0.72
SPG7-210ENST00000564409 ZNF253O75346 499 aa10.57□□□□□ -0.72
SPG7-210ENST00000564409 CST7O76096 145 aa10.57□□□□□ -0.72
SPG7-210ENST00000564409 H2AFB2P0C5Z0 115 aa10.57□□□□□ -0.72
SPG7-210ENST00000564409 RPL29P47914 159 aaKnown RBP10.57□□□□□ -0.72
SPG7-210ENST00000564409 SULT1A1P50225 295 aa10.57□□□□□ -0.72
SPG7-210ENST00000564409 ATP6V1FQ16864 119 aa10.57□□□□□ -0.72
SPG7-210ENST00000564409 MZT2BQ6NZ67 158 aa10.57□□□□□ -0.72
SPG7-210ENST00000564409 STX12Q86Y82 276 aa10.57□□□□□ -0.72
SPG7-210ENST00000564409 SAT2Q96F10 170 aaPredicted RBP10.57□□□□□ -0.72
SPG7-210ENST00000564409 ATG101Q9BSB4 218 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms