RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 RHOBP62745 196 aa16.8■□□□□ 0.28
NME3-206ENST00000564252 SLC38A11Q08AI6 406 aa16.8■□□□□ 0.28
NME3-206ENST00000564252 IAH1Q2TAA2 248 aaPredicted RBP16.8■□□□□ 0.28
NME3-206ENST00000564252 TEPPQ6URK8 271 aa16.8■□□□□ 0.28
NME3-206ENST00000564252 S100A7AQ86SG5 101 aa16.8■□□□□ 0.28
NME3-206ENST00000564252 SDHCQ99643 169 aaPredicted RBP16.8■□□□□ 0.28
NME3-206ENST00000564252 ARV1Q9H2C2 271 aa16.8■□□□□ 0.28
NME3-206ENST00000564252 MGAT4CQ9UBM8 478 aa16.8■□□□□ 0.28
NME3-206ENST00000564252 RCL1Q9Y2P8 373 aaKnown RBP16.8■□□□□ 0.28
NME3-206ENST00000564252 LINC00854A0A1B0GVQ3 168 aa16.79■□□□□ 0.28
NME3-206ENST00000564252 ZNF701M0R085 212 aaPredicted RBP16.79■□□□□ 0.28
NME3-206ENST00000564252 SCGB1D2O95969 90 aa16.79■□□□□ 0.28
NME3-206ENST00000564252 PRB4P10163 310 aaPredicted RBP16.79■□□□□ 0.28
NME3-206ENST00000564252 FAM3BP58499 235 aaPredicted RBP16.79■□□□□ 0.28
NME3-206ENST00000564252 FCN2Q15485 313 aa16.79■□□□□ 0.28
NME3-206ENST00000564252 C4orf46Q504U0 113 aa16.79■□□□□ 0.28
NME3-206ENST00000564252 TMEM256Q8N2U0 113 aa16.79■□□□□ 0.28
NME3-206ENST00000564252 OR10P1Q8NGE3 313 aa16.79■□□□□ 0.28
NME3-206ENST00000564252 LRRC20Q8TCA0 184 aa16.79■□□□□ 0.28
NME3-206ENST00000564252 TSC22D2O75157 780 aa16.78■□□□□ 0.28
NME3-206ENST00000564252 TAS2R30P59541 319 aa16.78■□□□□ 0.28
NME3-206ENST00000564252 SOHLH1Q5JUK2 328 aa16.78■□□□□ 0.28
NME3-206ENST00000564252 ZBTB8BQ8NAP8 495 aaPredicted RBP16.78■□□□□ 0.28
NME3-206ENST00000564252 LINC01587Q99440 93 aa16.78■□□□□ 0.28
NME3-206ENST00000564252 TAS2R60P59551 318 aa16.77■□□□□ 0.28
NME3-206ENST00000564252 ARL16Q0P5N6 197 aa16.77■□□□□ 0.28
NME3-206ENST00000564252 C1orf134Q5TEV5 83 aa16.77■□□□□ 0.28
NME3-206ENST00000564252 PXDC1Q5TGL8 231 aa16.77■□□□□ 0.28
NME3-206ENST00000564252 RPUSD4Q96CM3 377 aaKnown RBP16.77■□□□□ 0.28
NME3-206ENST00000564252 PPP1R14DQ9NXH3 145 aa16.77■□□□□ 0.28
NME3-206ENST00000564252 CXCL2P19875 107 aa16.76■□□□□ 0.27
NME3-206ENST00000564252 ZNF546Q86UE3 836 aa16.76■□□□□ 0.27
NME3-206ENST00000564252 MITD1Q8WV92 249 aa16.76■□□□□ 0.27
NME3-206ENST00000564252 GSKIPQ9P0R6 139 aa16.76■□□□□ 0.27
NME3-206ENST00000564252 RNF24Q9Y225 148 aa16.76■□□□□ 0.27
NME3-206ENST00000564252 C7orf66A4D0T2 115 aa16.75■□□□□ 0.27
NME3-206ENST00000564252 F5H768 121 aa16.75■□□□□ 0.27
NME3-206ENST00000564252 GOSR2O14653 212 aa16.75■□□□□ 0.27
NME3-206ENST00000564252 AGPAT2O15120 278 aa16.75■□□□□ 0.27
NME3-206ENST00000564252 LCN15Q6UWW0 184 aa16.75■□□□□ 0.27
NME3-206ENST00000564252 LINC00305Q7Z4B0 112 aa16.75■□□□□ 0.27
NME3-206ENST00000564252 C16orf74Q96GX8 76 aa16.75■□□□□ 0.27
NME3-206ENST00000564252 ATG101Q9BSB4 218 aa16.75■□□□□ 0.27
NME3-206ENST00000564252 GGACTQ9BVM4 153 aa16.75■□□□□ 0.27
NME3-206ENST00000564252 ZNF331Q9NQX6 463 aaPredicted RBP16.75■□□□□ 0.27
NME3-206ENST00000564252 CBY3A6NI87 242 aa16.74■□□□□ 0.27
NME3-206ENST00000564252 CENPXA8MT69 81 aa16.74■□□□□ 0.27
NME3-206ENST00000564252 MBPP02686 304 aaPredicted RBP16.74■□□□□ 0.27
NME3-206ENST00000564252 ATP5G1P05496 136 aa16.74■□□□□ 0.27
NME3-206ENST00000564252 CDKN1BP46527 198 aa16.74■□□□□ 0.27
NME3-206ENST00000564252 ATP5G3P48201 142 aa16.74■□□□□ 0.27
NME3-206ENST00000564252 HSPG2P98160 4391 aa16.73■□□□□ 0.27
NME3-206ENST00000564252 MUC4Q99102 2169 aa16.73■□□□□ 0.27
NME3-206ENST00000564252 SNRPCP09234 159 aaKnown RBP16.73■□□□□ 0.27
NME3-206ENST00000564252 HTN1P15515 57 aa16.73■□□□□ 0.27
NME3-206ENST00000564252 MGST2Q99735 147 aa16.73■□□□□ 0.27
NME3-206ENST00000564252 SLC50A1Q9BRV3 221 aa16.73■□□□□ 0.27
NME3-206ENST00000564252 NUDT3O95989 172 aa16.72■□□□□ 0.27
NME3-206ENST00000564252 IL7P13232 177 aa16.72■□□□□ 0.27
NME3-206ENST00000564252 MORN5Q5VZ52 161 aa16.72■□□□□ 0.27
NME3-206ENST00000564252 ZNF575Q86XF7 245 aa16.72■□□□□ 0.27
NME3-206ENST00000564252 BPIFA4PQ86YQ2 179 aa16.72■□□□□ 0.27
NME3-206ENST00000564252 ZNRF2Q8NHG8 242 aa16.72■□□□□ 0.27
NME3-206ENST00000564252 RNASE8Q8TDE3 154 aaKnown RBP16.72■□□□□ 0.27
NME3-206ENST00000564252 TMEM37Q8WXS4 190 aa16.72■□□□□ 0.27
NME3-206ENST00000564252 TIMM8BQ9Y5J9 83 aaPredicted RBP16.72■□□□□ 0.27
NME3-206ENST00000564252 SLC17A3O00476 420 aa16.71■□□□□ 0.27
NME3-206ENST00000564252 KIR3DS1Q14943 382 aa16.71■□□□□ 0.27
NME3-206ENST00000564252 CNPY1Q3B7I2 92 aa16.71■□□□□ 0.27
NME3-206ENST00000564252 ZNF493Q6ZR52 646 aa16.71■□□□□ 0.27
NME3-206ENST00000564252 TMEM263Q8WUH6 116 aaKnown RBP16.71■□□□□ 0.27
NME3-206ENST00000564252 PRAC2D3DTV9 90 aa16.7■□□□□ 0.26
NME3-206ENST00000564252 H7BYZ3 331 aa16.7■□□□□ 0.26
NME3-206ENST00000564252 CCSO14618 274 aa16.7■□□□□ 0.26
NME3-206ENST00000564252 COX7A2P2O60397 106 aa16.7■□□□□ 0.26
NME3-206ENST00000564252 OPCMLQ14982 345 aa16.7■□□□□ 0.26
NME3-206ENST00000564252 C20orf85Q9H1P6 137 aa16.7■□□□□ 0.26
NME3-206ENST00000564252 NOP10Q9NPE3 64 aaKnown RBP16.7■□□□□ 0.26
NME3-206ENST00000564252 LRP1BQ9NZR2 4599 aa16.7■□□□□ 0.26
NME3-206ENST00000564252 NBDYA0A0U1RRE5 68 aa16.69■□□□□ 0.26
NME3-206ENST00000564252 H3BTX0 84 aa16.69■□□□□ 0.26
NME3-206ENST00000564252 RNF141Q8WVD5 230 aa16.69■□□□□ 0.26
NME3-206ENST00000564252 C20orf144Q9BQM9 153 aa16.69■□□□□ 0.26
NME3-206ENST00000564252 PARD6GQ9BYG4 376 aaPredicted RBP16.69■□□□□ 0.26
NME3-206ENST00000564252 ABCA13Q86UQ4 5058 aa16.68■□□□□ 0.26
NME3-206ENST00000564252 IGLC2P0DOY2 106 aa16.68■□□□□ 0.26
NME3-206ENST00000564252 C10orf113Q5VZT2 155 aa16.68■□□□□ 0.26
NME3-206ENST00000564252 SAT2Q96F10 170 aaPredicted RBP16.68■□□□□ 0.26
NME3-206ENST00000564252 H3BQ15 152 aa16.67■□□□□ 0.26
NME3-206ENST00000564252 PLA2G10O15496 165 aa16.67■□□□□ 0.26
NME3-206ENST00000564252 CAMLGP49069 296 aa16.67■□□□□ 0.26
NME3-206ENST00000564252 CCL18P55774 89 aa16.67■□□□□ 0.26
NME3-206ENST00000564252 GFI1BQ5VTD9 330 aa16.67■□□□□ 0.26
NME3-206ENST00000564252 OR10J6PQ8NGY7 276 aa16.67■□□□□ 0.26
NME3-206ENST00000564252 C11orf1Q9H5F2 150 aa16.67■□□□□ 0.26
NME3-206ENST00000564252 LINC00588Q9Y4M8 146 aa16.67■□□□□ 0.26
NME3-206ENST00000564252 PXMP4Q9Y6I8 212 aa16.67■□□□□ 0.26
NME3-206ENST00000564252 L7N2F9 121 aa16.66■□□□□ 0.26
NME3-206ENST00000564252 VAMP2P63027 116 aa16.66■□□□□ 0.26
NME3-206ENST00000564252 TNP2Q05952 138 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms