RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 GPR183P32249 361 aa9.43□□□□□ -0.9
ABCA3-203ENST00000563623 KLF17Q5JT82 389 aaPredicted RBP9.43□□□□□ -0.9
ABCA3-203ENST00000563623 TEX36Q5VZQ5 186 aa9.43□□□□□ -0.9
ABCA3-203ENST00000563623 FAM71F2Q6NXP2 309 aa9.43□□□□□ -0.9
ABCA3-203ENST00000563623 PRO3102Q9H379 93 aa9.43□□□□□ -0.9
ABCA3-203ENST00000563623 OTORQ9NRC9 128 aa9.43□□□□□ -0.9
ABCA3-203ENST00000563623 HILPDAQ9Y5L2 63 aa9.43□□□□□ -0.9
ABCA3-203ENST00000563623 SOX21Q9Y651 276 aaPredicted RBP9.43□□□□□ -0.9
ABCA3-203ENST00000563623 CTSZQ9UBR2 303 aa9.43□□□□□ -0.9
ABCA3-203ENST00000563623 IGHV3OR16-8A0A075B7F1 116 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 PPIAL4CA0A0B4J2A2 164 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 K7EM74 188 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 LTAP01374 205 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 IL4P05112 153 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 PPIAL4GP0DN37 164 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 GP9P14770 177 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 PET117Q6UWS5 81 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 C7orf69Q9H7B7 122 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 IGHV3-35A0A0C4DH35 117 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 J3QR89 54 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 KLK10O43240 276 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 IGHV1-8P0DP01 117 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 PPP1R27Q86WC6 154 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 OR10AG1Q8NH19 301 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 SCNM1Q9BWG6 230 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 GEMIN7Q9H840 131 aaKnown RBP9.42□□□□□ -0.9
ABCA3-203ENST00000563623 ONECUT1Q9UBC0 465 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 ARHGAP32A7KAX9 2087 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 TM4SF20Q53R12 229 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 MLST8Q9BVC4 326 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 TMEM133Q9H2Q1 129 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 PSG8Q9UQ74 426 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 SIGLEC9Q9Y336 463 aa9.42□□□□□ -0.9
ABCA3-203ENST00000563623 FAM231BA6NCW3 169 aa9.41□□□□□ -0.9
ABCA3-203ENST00000563623 A6NJY4 79 aa9.41□□□□□ -0.9
ABCA3-203ENST00000563623 G3V4G9 280 aa9.41□□□□□ -0.9
ABCA3-203ENST00000563623 LOXP28300 417 aaPredicted RBP9.41□□□□□ -0.9
ABCA3-203ENST00000563623 NMUP48645 174 aa9.41□□□□□ -0.9
ABCA3-203ENST00000563623 CITED1Q99966 193 aa9.41□□□□□ -0.9
ABCA3-203ENST00000563623 KLF12Q9Y4X4 402 aa9.41□□□□□ -0.9
ABCA3-203ENST00000563623 IGHV3-23P01764 117 aa9.41□□□□□ -0.9
ABCA3-203ENST00000563623 MYCNOSP40205 109 aa9.41□□□□□ -0.9
ABCA3-203ENST00000563623 IFI27P40305 119 aaPredicted RBP9.41□□□□□ -0.9
ABCA3-203ENST00000563623 FAM120AOSQ5T036 256 aa9.41□□□□□ -0.9
ABCA3-203ENST00000563623 ZNF492Q9P255 531 aa9.41□□□□□ -0.9
ABCA3-203ENST00000563623 F11RQ9Y624 299 aaKnown RBP9.41□□□□□ -0.9
ABCA3-203ENST00000563623 C19orf71A6NCJ1 209 aa9.41□□□□□ -0.9
ABCA3-203ENST00000563623 APOBEC3AP31941 199 aaPredicted RBP9.41□□□□□ -0.9
ABCA3-203ENST00000563623 PRSS22Q9GZN4 317 aa9.41□□□□□ -0.9
ABCA3-203ENST00000563623 AAMDCQ9H7C9 122 aa9.41□□□□□ -0.9
ABCA3-203ENST00000563623 NGBQ9NPG2 151 aa9.41□□□□□ -0.9
ABCA3-203ENST00000563623 C18orf15Q96N68 181 aa9.4□□□□□ -0.9
ABCA3-203ENST00000563623 LINC00574Q9H8X3 128 aa9.4□□□□□ -0.9
ABCA3-203ENST00000563623 TSSC4Q9Y5U2 329 aaPredicted RBP9.4□□□□□ -0.9
ABCA3-203ENST00000563623 TMEM213A2RRL7 107 aa9.4□□□□□ -0.9
ABCA3-203ENST00000563623 SMKR1H3BMG3 65 aa9.4□□□□□ -0.9
ABCA3-203ENST00000563623 RHOGP84095 191 aa9.4□□□□□ -0.9
ABCA3-203ENST00000563623 IGFL2Q6UWQ7 119 aa9.4□□□□□ -0.9
ABCA3-203ENST00000563623 A0A1B0GW15 77 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 TMEM189A5PLL7 270 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 D6R8Y8 96 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 FCN3O75636 299 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 FSTL3O95633 263 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 NCR2O95944 276 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 FAM106CPP0CH98 169 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 CACNG7P62955 275 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 HIST1H1AQ02539 215 aaPredicted RBP9.39□□□□□ -0.91
ABCA3-203ENST00000563623 FAM106AQ4KMX7 169 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 PRSS33Q8NF86 280 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 C8orf49Q96NF6 230 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 NDFIP1Q9BT67 221 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 CT83Q5H943 113 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 SHISA2Q6UWI4 295 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 AMN1Q8IY45 258 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 PRELID3AQ96N28 172 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 SCGB2A1O75556 95 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 IGFL4Q6B9Z1 124 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 GFRALQ6UXV0 394 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 OR2K2Q8NGT1 345 aa9.39□□□□□ -0.91
ABCA3-203ENST00000563623 RNASE6Q93091 150 aaKnown RBP9.39□□□□□ -0.91
ABCA3-203ENST00000563623 COL27A1Q8IZC6 1860 aaPredicted RBP9.39□□□□□ -0.91
ABCA3-203ENST00000563623 ZFHX4Q86UP3 3567 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 IGHV1-3A0A0C4DH29 117 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 IGLC1P0CG04 106 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 HSD52Q0P140 79 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 LYZL1Q6UWQ5 148 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 SRSF8Q9BRL6 282 aaKnown RBP9.38□□□□□ -0.91
ABCA3-203ENST00000563623 SPTBN4Q9H254 2564 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 A0A0G2JNJ9 132 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 TWIST1Q15672 202 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 TMEM155Q4W5P6 130 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 TMEM97Q5BJF2 176 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 ASCL5Q7RTU5 278 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 NEU4Q8WWR8 484 aaPredicted RBP9.38□□□□□ -0.91
ABCA3-203ENST00000563623 SCRT2Q9NQ03 307 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 Q9UFV3 132 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 SPCS1Q9Y6A9 102 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 HAX1O00165 279 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 CKS2P33552 79 aa9.38□□□□□ -0.91
ABCA3-203ENST00000563623 ARL3P36405 182 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms