RNA–Protein interactions for RNA: ENST00000563396.1

SMPD3-204, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-204ENST00000563396 OR11H7Q8NGC8 314 aa10.07□□□□□ -0.8
SMPD3-204ENST00000563396 ENKURQ8TC29 256 aa10.07□□□□□ -0.8
SMPD3-204ENST00000563396 TMEM37Q8WXS4 190 aa10.07□□□□□ -0.8
SMPD3-204ENST00000563396 RNF126Q9BV68 326 aa10.07□□□□□ -0.8
SMPD3-204ENST00000563396 UQCC1Q9NVA1 299 aa10.07□□□□□ -0.8
SMPD3-204ENST00000563396 IGHV4-4A0A075B6R2 117 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 IGSF23A1L1A6 192 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 FAM24AA6NFZ4 105 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 IGLL5B9A064 214 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 COX7A2P2O60397 106 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 CST7O76096 145 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 CAMLGP49069 296 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 BCAP31P51572 246 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 S100A10P60903 97 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 FGL1Q08830 312 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 OPCMLQ14982 345 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 MORN5Q5VZ52 161 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 IGFL4Q6B9Z1 124 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 NRARPQ7Z6K4 114 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 STX12Q86Y82 276 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 RPP25LQ8N5L8 163 aaKnown RBP10.06□□□□□ -0.8
SMPD3-204ENST00000563396 TMEM252Q8N6L7 170 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 ZNF738Q8NE65 137 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 CHAC2Q8WUX2 184 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 SLC50A1Q9BRV3 221 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 ZNF331Q9NQX6 463 aaPredicted RBP10.06□□□□□ -0.8
SMPD3-204ENST00000563396 DKK2Q9UBU2 259 aa10.06□□□□□ -0.8
SMPD3-204ENST00000563396 IGHV3OR16-12A0A075B7B8 117 aa10.05□□□□□ -0.8
SMPD3-204ENST00000563396 DEFB131BA0A096LNP1 70 aa10.05□□□□□ -0.8
SMPD3-204ENST00000563396 BOLA2-SMG1P6H3BVE0 249 aa10.05□□□□□ -0.8
SMPD3-204ENST00000563396 PRAF2O60831 178 aa10.05□□□□□ -0.8
SMPD3-204ENST00000563396 INSP01308 110 aa10.05□□□□□ -0.8
SMPD3-204ENST00000563396 HBE1P02100 147 aa10.05□□□□□ -0.8
SMPD3-204ENST00000563396 SPART-AS1P0CW21 52 aa10.05□□□□□ -0.8
SMPD3-204ENST00000563396 IGLC2P0DOY2 106 aa10.05□□□□□ -0.8
SMPD3-204ENST00000563396 S100A11P31949 105 aa10.05□□□□□ -0.8
SMPD3-204ENST00000563396 HBG1P69891 147 aa10.05□□□□□ -0.8
SMPD3-204ENST00000563396 HBG2P69892 147 aa10.05□□□□□ -0.8
SMPD3-204ENST00000563396 RAB31Q13636 194 aa10.05□□□□□ -0.8
SMPD3-204ENST00000563396 PSG3Q16557 428 aa10.05□□□□□ -0.8
SMPD3-204ENST00000563396 BPIFA4PQ86YQ2 179 aa10.05□□□□□ -0.8
SMPD3-204ENST00000563396 OR8A1Q8NGG7 326 aa10.05□□□□□ -0.8
SMPD3-204ENST00000563396 GPN1Q9HCN4 374 aaPredicted RBP10.05□□□□□ -0.8
SMPD3-204ENST00000563396 UBE2L5PA0A1B0GUS4 154 aa10.04□□□□□ -0.8
SMPD3-204ENST00000563396 LOC102723971A0A1B0GUV8 181 aa10.04□□□□□ -0.8
SMPD3-204ENST00000563396 RPL29P47914 159 aaKnown RBP10.04□□□□□ -0.8
SMPD3-204ENST00000563396 OXA1LQ15070 435 aa10.04□□□□□ -0.8
SMPD3-204ENST00000563396 SPINK13Q1W4C9 94 aa10.04□□□□□ -0.8
SMPD3-204ENST00000563396 C10orf113Q5VZT2 155 aa10.04□□□□□ -0.8
SMPD3-204ENST00000563396 MIC13Q5XKP0 118 aa10.04□□□□□ -0.8
SMPD3-204ENST00000563396 ZNF767PQ75MW2 155 aa10.04□□□□□ -0.8
SMPD3-204ENST00000563396 PFDN5Q99471 154 aa10.04□□□□□ -0.8
SMPD3-204ENST00000563396 DNAH10Q8IVF4 4471 aa10.03□□□□□ -0.8
SMPD3-204ENST00000563396 M0R2Z0 102 aa10.03□□□□□ -0.8
SMPD3-204ENST00000563396 TSPOP30536 169 aa10.03□□□□□ -0.8
SMPD3-204ENST00000563396 ATP6V1FQ16864 119 aa10.03□□□□□ -0.8
SMPD3-204ENST00000563396 RRN3P1Q2M238 152 aa10.03□□□□□ -0.8
SMPD3-204ENST00000563396 FAM222AQ5U5X8 452 aa10.03□□□□□ -0.8
SMPD3-204ENST00000563396 Q6ZRG5 221 aa10.03□□□□□ -0.8
SMPD3-204ENST00000563396 OR1L4Q8NGR5 311 aa10.03□□□□□ -0.8
SMPD3-204ENST00000563396 NMES1Q9C002 83 aa10.03□□□□□ -0.8
SMPD3-204ENST00000563396 YTHDF2Q9Y5A9 579 aaKnown RBP10.03□□□□□ -0.8
SMPD3-204ENST00000563396 SLC17A3O00476 420 aa10.02□□□□□ -0.81
SMPD3-204ENST00000563396 ZNF253O75346 499 aa10.02□□□□□ -0.81
SMPD3-204ENST00000563396 MPDU1O75352 247 aa10.02□□□□□ -0.81
SMPD3-204ENST00000563396 B2MP61769 119 aa10.02□□□□□ -0.81
SMPD3-204ENST00000563396 HIST1H1AQ02539 215 aaPredicted RBP10.02□□□□□ -0.81
SMPD3-204ENST00000563396 BAXQ07812 192 aa10.02□□□□□ -0.81
SMPD3-204ENST00000563396 BAP18Q8IXM2 172 aa10.02□□□□□ -0.81
SMPD3-204ENST00000563396 RPUSD4Q96CM3 377 aaKnown RBP10.02□□□□□ -0.81
SMPD3-204ENST00000563396 SAT2Q96F10 170 aaPredicted RBP10.02□□□□□ -0.81
SMPD3-204ENST00000563396 FAM210BQ96KR6 192 aa10.02□□□□□ -0.81
SMPD3-204ENST00000563396 NIPSNAP3BQ9BS92 247 aa10.02□□□□□ -0.81
SMPD3-204ENST00000563396 MARVELD1Q9BSK0 173 aa10.02□□□□□ -0.81
SMPD3-204ENST00000563396 DNAJC4Q9NNZ3 241 aa10.02□□□□□ -0.81
SMPD3-204ENST00000563396 SLC39A9Q9NUM3 307 aa10.02□□□□□ -0.81
SMPD3-204ENST00000563396 PXMP4Q9Y6I8 212 aa10.02□□□□□ -0.81
SMPD3-204ENST00000563396 INMT-MINDY4F8WBC2 141 aa10.01□□□□□ -0.81
SMPD3-204ENST00000563396 EMP1P54849 157 aa10.01□□□□□ -0.81
SMPD3-204ENST00000563396 GUK1Q16774 197 aa10.01□□□□□ -0.81
SMPD3-204ENST00000563396 TMEM256Q8N2U0 113 aa10.01□□□□□ -0.81
SMPD3-204ENST00000563396 LRRC20Q8TCA0 184 aa10.01□□□□□ -0.81
SMPD3-204ENST00000563396 NPCDR1Q9BY65 106 aa10.01□□□□□ -0.81
SMPD3-204ENST00000563396 HECTD4Q9Y4D8 3996 aa10□□□□□ -0.81
SMPD3-204ENST00000563396 PLAC8L1A1L4L8 177 aa10□□□□□ -0.81
SMPD3-204ENST00000563396 E5RGE8 158 aa10□□□□□ -0.81
SMPD3-204ENST00000563396 H0YIZ8 118 aa10□□□□□ -0.81
SMPD3-204ENST00000563396 H3BQ15 152 aa10□□□□□ -0.81
SMPD3-204ENST00000563396 FGF7P21781 194 aa10□□□□□ -0.81
SMPD3-204ENST00000563396 CDKN1BP46527 198 aa10□□□□□ -0.81
SMPD3-204ENST00000563396 TMEM208Q9BTX3 173 aa10□□□□□ -0.81
SMPD3-204ENST00000563396 NDUFAF3Q9BU61 184 aa10□□□□□ -0.81
SMPD3-204ENST00000563396 OR5AC2Q9NZP5 309 aa10□□□□□ -0.81
SMPD3-204ENST00000563396 TMEM14CQ9P0S9 112 aa10□□□□□ -0.81
SMPD3-204ENST00000563396 TRAV12-2A0A075B6T6 113 aa9.99□□□□□ -0.81
SMPD3-204ENST00000563396 LYRM9A8MSI8 78 aa9.99□□□□□ -0.81
SMPD3-204ENST00000563396 SIX6O95475 246 aa9.99□□□□□ -0.81
SMPD3-204ENST00000563396 H2BFSP57053 126 aa9.99□□□□□ -0.81
SMPD3-204ENST00000563396 CYCSP99999 105 aaKnown RBP9.99□□□□□ -0.81
SMPD3-204ENST00000563396 OR5C1Q8NGR4 320 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms