RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 LRP1BQ9NZR2 4599 aa9.09□□□□□ -0.95
SF3B3-202ENST00000562722 H3BMQ9 156 aa9.09□□□□□ -0.95
SF3B3-202ENST00000562722 ADAP1O75689 374 aa9.09□□□□□ -0.95
SF3B3-202ENST00000562722 SELENOTP62341 195 aa9.09□□□□□ -0.95
SF3B3-202ENST00000562722 OR5I1Q13606 314 aa9.09□□□□□ -0.95
SF3B3-202ENST00000562722 SSX7Q7RTT5 188 aa9.09□□□□□ -0.95
SF3B3-202ENST00000562722 RPUSD4Q96CM3 377 aaKnown RBP9.09□□□□□ -0.95
SF3B3-202ENST00000562722 ARL6Q9H0F7 186 aa9.09□□□□□ -0.95
SF3B3-202ENST00000562722 NOP10Q9NPE3 64 aaKnown RBP9.09□□□□□ -0.95
SF3B3-202ENST00000562722 A0A087X0K7 114 aa9.08□□□□□ -0.96
SF3B3-202ENST00000562722 CDK2AP2O75956 126 aa9.08□□□□□ -0.96
SF3B3-202ENST00000562722 SCGB1D2O95969 90 aa9.08□□□□□ -0.96
SF3B3-202ENST00000562722 SNRPCP09234 159 aaKnown RBP9.08□□□□□ -0.96
SF3B3-202ENST00000562722 CDKN1BP46527 198 aa9.08□□□□□ -0.96
SF3B3-202ENST00000562722 OR10J6PQ8NGY7 276 aa9.08□□□□□ -0.96
SF3B3-202ENST00000562722 MGAT4CQ9UBM8 478 aa9.08□□□□□ -0.96
SF3B3-202ENST00000562722 RNF24Q9Y225 148 aa9.08□□□□□ -0.96
SF3B3-202ENST00000562722 H7BYZ3 331 aa9.07□□□□□ -0.96
SF3B3-202ENST00000562722 METTL15P1P0C7V9 234 aa9.07□□□□□ -0.96
SF3B3-202ENST00000562722 S100A5P33763 92 aa9.07□□□□□ -0.96
SF3B3-202ENST00000562722 INPP1P49441 399 aa9.07□□□□□ -0.96
SF3B3-202ENST00000562722 ID3Q02535 119 aa9.07□□□□□ -0.96
SF3B3-202ENST00000562722 SLC38A11Q08AI6 406 aa9.07□□□□□ -0.96
SF3B3-202ENST00000562722 ZNF493Q6ZR52 646 aa9.07□□□□□ -0.96
SF3B3-202ENST00000562722 CCDC190Q86UF4 302 aa9.07□□□□□ -0.96
SF3B3-202ENST00000562722 CCDC28AQ8IWP9 274 aa9.07□□□□□ -0.96
SF3B3-202ENST00000562722 TMEM263Q8WUH6 116 aaKnown RBP9.07□□□□□ -0.96
SF3B3-202ENST00000562722 GNPNAT1Q96EK6 184 aaPredicted RBP9.07□□□□□ -0.96
SF3B3-202ENST00000562722 ARV1Q9H2C2 271 aa9.07□□□□□ -0.96
SF3B3-202ENST00000562722 V9GYH0 126 aa9.07□□□□□ -0.96
SF3B3-202ENST00000562722 TRAV26-1A0A087WT03 109 aa9.06□□□□□ -0.96
SF3B3-202ENST00000562722 A0A0J9YY99 117 aa9.06□□□□□ -0.96
SF3B3-202ENST00000562722 C9orf170A2RU37 121 aa9.06□□□□□ -0.96
SF3B3-202ENST00000562722 PMS2P5A8MQ11 134 aa9.06□□□□□ -0.96
SF3B3-202ENST00000562722 GOSR2O14653 212 aa9.06□□□□□ -0.96
SF3B3-202ENST00000562722 CCNKO75909 580 aa9.06□□□□□ -0.96
SF3B3-202ENST00000562722 M6PRP20645 277 aa9.06□□□□□ -0.96
SF3B3-202ENST00000562722 PLP1P60201 277 aa9.06□□□□□ -0.96
SF3B3-202ENST00000562722 UBE2MP61081 183 aaKnown RBP9.06□□□□□ -0.96
SF3B3-202ENST00000562722 DLK1P80370 383 aa9.06□□□□□ -0.96
SF3B3-202ENST00000562722 TTC32Q5I0X7 151 aa9.06□□□□□ -0.96
SF3B3-202ENST00000562722 TEPPQ6URK8 271 aa9.06□□□□□ -0.96
SF3B3-202ENST00000562722 LCN15Q6UWW0 184 aa9.06□□□□□ -0.96
SF3B3-202ENST00000562722 SPATA12Q7Z6I5 190 aa9.06□□□□□ -0.96
SF3B3-202ENST00000562722 OR10P1Q8NGE3 313 aa9.06□□□□□ -0.96
SF3B3-202ENST00000562722 RNASE8Q8TDE3 154 aaKnown RBP9.06□□□□□ -0.96
SF3B3-202ENST00000562722 DEDD2Q8WXF8 326 aa9.06□□□□□ -0.96
SF3B3-202ENST00000562722 Q9H8V8 135 aa9.06□□□□□ -0.96
SF3B3-202ENST00000562722 NPVFQ9HCQ7 196 aa9.06□□□□□ -0.96
SF3B3-202ENST00000562722 DNAH5Q8TE73 4624 aa9.06□□□□□ -0.96
SF3B3-202ENST00000562722 CCDC160A6NGH7 325 aa9.05□□□□□ -0.96
SF3B3-202ENST00000562722 SNURFLB1AK76 121 aa9.05□□□□□ -0.96
SF3B3-202ENST00000562722 H3BTX0 84 aa9.05□□□□□ -0.96
SF3B3-202ENST00000562722 J3KRW8 73 aa9.05□□□□□ -0.96
SF3B3-202ENST00000562722 RLN2P04090 185 aa9.05□□□□□ -0.96
SF3B3-202ENST00000562722 CXCL2P19875 107 aa9.05□□□□□ -0.96
SF3B3-202ENST00000562722 LINC00305Q7Z4B0 112 aa9.05□□□□□ -0.96
SF3B3-202ENST00000562722 ZNF546Q86UE3 836 aa9.05□□□□□ -0.96
SF3B3-202ENST00000562722 SMIM8Q96KF7 97 aa9.05□□□□□ -0.96
SF3B3-202ENST00000562722 SLC50A1Q9BRV3 221 aa9.05□□□□□ -0.96
SF3B3-202ENST00000562722 PARD6GQ9BYG4 376 aaPredicted RBP9.05□□□□□ -0.96
SF3B3-202ENST00000562722 GAGE12BA1L429 117 aa9.04□□□□□ -0.96
SF3B3-202ENST00000562722 COX7A2P2O60397 106 aa9.04□□□□□ -0.96
SF3B3-202ENST00000562722 GAGE7O76087 117 aa9.04□□□□□ -0.96
SF3B3-202ENST00000562722 GAGE12FP0CL80 117 aa9.04□□□□□ -0.96
SF3B3-202ENST00000562722 GAGE12GP0CL81 117 aa9.04□□□□□ -0.96
SF3B3-202ENST00000562722 GAGE12IP0CL82 117 aa9.04□□□□□ -0.96
SF3B3-202ENST00000562722 C4orf46Q504U0 113 aa9.04□□□□□ -0.96
SF3B3-202ENST00000562722 PXDC1Q5TGL8 231 aa9.04□□□□□ -0.96
SF3B3-202ENST00000562722 TMEM14EPQ6UXP3 125 aa9.04□□□□□ -0.96
SF3B3-202ENST00000562722 PATE2Q6UY27 113 aa9.04□□□□□ -0.96
SF3B3-202ENST00000562722 BPIFA4PQ86YQ2 179 aa9.04□□□□□ -0.96
SF3B3-202ENST00000562722 C20orf144Q9BQM9 153 aa9.04□□□□□ -0.96
SF3B3-202ENST00000562722 ZNF331Q9NQX6 463 aaPredicted RBP9.04□□□□□ -0.96
SF3B3-202ENST00000562722 FNDC10F2Z333 226 aa9.03□□□□□ -0.96
SF3B3-202ENST00000562722 K7EPK0 472 aa9.03□□□□□ -0.96
SF3B3-202ENST00000562722 ZNF701M0R085 212 aaPredicted RBP9.03□□□□□ -0.96
SF3B3-202ENST00000562722 MRPS12O15235 138 aaKnown RBP9.03□□□□□ -0.96
SF3B3-202ENST00000562722 KIR3DS1Q14943 382 aa9.03□□□□□ -0.96
SF3B3-202ENST00000562722 IAH1Q2TAA2 248 aaPredicted RBP9.03□□□□□ -0.96
SF3B3-202ENST00000562722 GFI1BQ5VTD9 330 aa9.03□□□□□ -0.96
SF3B3-202ENST00000562722 TRIQKQ629K1 86 aa9.03□□□□□ -0.96
SF3B3-202ENST00000562722 RXFP4Q8TDU9 374 aa9.03□□□□□ -0.96
SF3B3-202ENST00000562722 GSKIPQ9P0R6 139 aa9.03□□□□□ -0.96
SF3B3-202ENST00000562722 FLVCR2Q9UPI3 526 aa9.03□□□□□ -0.96
SF3B3-202ENST00000562722 LINC00854A0A1B0GVQ3 168 aa9.02□□□□□ -0.97
SF3B3-202ENST00000562722 PRAC2D3DTV9 90 aa9.02□□□□□ -0.97
SF3B3-202ENST00000562722 SLC17A3O00476 420 aa9.02□□□□□ -0.97
SF3B3-202ENST00000562722 AGPAT2O15120 278 aa9.02□□□□□ -0.97
SF3B3-202ENST00000562722 NDUFB6O95139 128 aa9.02□□□□□ -0.97
SF3B3-202ENST00000562722 OR4E1P0C645 316 aa9.02□□□□□ -0.97
SF3B3-202ENST00000562722 HOXA5P20719 270 aa9.02□□□□□ -0.97
SF3B3-202ENST00000562722 SPANXN2Q5MJ10 180 aa9.02□□□□□ -0.97
SF3B3-202ENST00000562722 C10orf113Q5VZT2 155 aa9.02□□□□□ -0.97
SF3B3-202ENST00000562722 ZNF503Q96F45 646 aa9.02□□□□□ -0.97
SF3B3-202ENST00000562722 SCRT2Q9NQ03 307 aa9.02□□□□□ -0.97
SF3B3-202ENST00000562722 APOBP04114 4563 aaKnown RBP9.02□□□□□ -0.97
SF3B3-202ENST00000562722 TRAV12-3A0A0B4J271 114 aa9.01□□□□□ -0.97
SF3B3-202ENST00000562722 NAP1L6A6NFF2 107 aa9.01□□□□□ -0.97
SF3B3-202ENST00000562722 TSC22D2O75157 780 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms