RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 MLST8Q9BVC4 326 aa11.22□□□□□ -0.61
GTF3C1-203ENST00000562609 LINC00312Q9Y6C7 94 aa11.22□□□□□ -0.61
GTF3C1-203ENST00000562609 SRRM4A7MD48 611 aaKnown RBP11.21□□□□□ -0.61
GTF3C1-203ENST00000562609 PPIFP30405 207 aaKnown RBP11.21□□□□□ -0.61
GTF3C1-203ENST00000562609 ZNRF1Q8ND25 227 aa11.21□□□□□ -0.61
GTF3C1-203ENST00000562609 ITLN1Q8WWA0 313 aa11.21□□□□□ -0.61
GTF3C1-203ENST00000562609 CHAC1Q9BUX1 264 aa11.21□□□□□ -0.61
GTF3C1-203ENST00000562609 CDIP1Q9H305 208 aa11.21□□□□□ -0.61
GTF3C1-203ENST00000562609 ABCA4P78363 2273 aa11.21□□□□□ -0.61
GTF3C1-203ENST00000562609 A0A1B0GWB2 263 aa11.21□□□□□ -0.62
GTF3C1-203ENST00000562609 C19orf71A6NCJ1 209 aa11.21□□□□□ -0.62
GTF3C1-203ENST00000562609 HAX1O00165 279 aa11.21□□□□□ -0.62
GTF3C1-203ENST00000562609 MBNL2Q5VZF2 373 aaKnown RBP11.21□□□□□ -0.62
GTF3C1-203ENST00000562609 MOGAT3Q86VF5 341 aa11.21□□□□□ -0.62
GTF3C1-203ENST00000562609 DDB2Q92466 427 aa11.21□□□□□ -0.62
GTF3C1-203ENST00000562609 GFRA4Q9GZZ7 299 aa11.21□□□□□ -0.62
GTF3C1-203ENST00000562609 GNG12Q9UBI6 72 aa11.21□□□□□ -0.62
GTF3C1-203ENST00000562609 APOMO95445 188 aa11.2□□□□□ -0.62
GTF3C1-203ENST00000562609 HERV-K104P63124 156 aa11.2□□□□□ -0.62
GTF3C1-203ENST00000562609 ZCCHC24Q8N2G6 241 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-203ENST00000562609 TMEM14BQ9NUH8 114 aa11.2□□□□□ -0.62
GTF3C1-203ENST00000562609 SPINT2O43291 252 aa11.2□□□□□ -0.62
GTF3C1-203ENST00000562609 COX7A2P2O60397 106 aa11.2□□□□□ -0.62
GTF3C1-203ENST00000562609 PLAUP00749 431 aa11.2□□□□□ -0.62
GTF3C1-203ENST00000562609 FAM57AQ8TBR7 257 aa11.2□□□□□ -0.62
GTF3C1-203ENST00000562609 ZNF502Q8TBZ5 544 aa11.2□□□□□ -0.62
GTF3C1-203ENST00000562609 FOXA2Q9Y261 457 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-203ENST00000562609 PGPA6NDG6 321 aa11.19□□□□□ -0.62
GTF3C1-203ENST00000562609 Q8NA96 180 aa11.19□□□□□ -0.62
GTF3C1-203ENST00000562609 FXYD5Q96DB9 178 aa11.19□□□□□ -0.62
GTF3C1-203ENST00000562609 DKK2Q9UBU2 259 aa11.19□□□□□ -0.62
GTF3C1-203ENST00000562609 PRO0461Q9UI25 63 aa11.19□□□□□ -0.62
GTF3C1-203ENST00000562609 IGKV1D-17A0A075B6S4 117 aa11.19□□□□□ -0.62
GTF3C1-203ENST00000562609 IGKV2D-26A0A0A0MRZ7 120 aa11.19□□□□□ -0.62
GTF3C1-203ENST00000562609 A0A0G2JNJ9 132 aa11.19□□□□□ -0.62
GTF3C1-203ENST00000562609 B5MCH6 92 aa11.19□□□□□ -0.62
GTF3C1-203ENST00000562609 C16orf97H3BN30 126 aa11.19□□□□□ -0.62
GTF3C1-203ENST00000562609 PRDX2P32119 198 aa11.19□□□□□ -0.62
GTF3C1-203ENST00000562609 DUX4L9Q6RFH8 374 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-203ENST00000562609 DEFB108BQ8NET1 73 aa11.19□□□□□ -0.62
GTF3C1-203ENST00000562609 ANAPC13Q9BS18 74 aa11.19□□□□□ -0.62
GTF3C1-203ENST00000562609 Q9UFV3 132 aa11.19□□□□□ -0.62
GTF3C1-203ENST00000562609 TANC2Q9HCD6 1990 aa11.19□□□□□ -0.62
GTF3C1-203ENST00000562609 DYSFO75923 2080 aa11.19□□□□□ -0.62
GTF3C1-203ENST00000562609 DCHS2Q6V1P9 2916 aa11.18□□□□□ -0.62
GTF3C1-203ENST00000562609 COL8A1P27658 744 aa11.18□□□□□ -0.62
GTF3C1-203ENST00000562609 GAGE5Q13069 117 aa11.18□□□□□ -0.62
GTF3C1-203ENST00000562609 GAGE6Q13070 117 aa11.18□□□□□ -0.62
GTF3C1-203ENST00000562609 C10orf113Q5VZT2 155 aa11.18□□□□□ -0.62
GTF3C1-203ENST00000562609 OR5AN1Q8NGI8 311 aa11.18□□□□□ -0.62
GTF3C1-203ENST00000562609 KLF12Q9Y4X4 402 aa11.18□□□□□ -0.62
GTF3C1-203ENST00000562609 ARMS2P0C7Q2 107 aa11.18□□□□□ -0.62
GTF3C1-203ENST00000562609 XGP55808 180 aa11.18□□□□□ -0.62
GTF3C1-203ENST00000562609 FOXI1Q12951 378 aa11.18□□□□□ -0.62
GTF3C1-203ENST00000562609 UTF1Q5T230 341 aa11.18□□□□□ -0.62
GTF3C1-203ENST00000562609 PDPNQ86YL7 162 aa11.18□□□□□ -0.62
GTF3C1-203ENST00000562609 ZNF492Q9P255 531 aa11.18□□□□□ -0.62
GTF3C1-203ENST00000562609 HIGD1BQ9P298 99 aa11.18□□□□□ -0.62
GTF3C1-203ENST00000562609 TNCP24821 2201 aa11.18□□□□□ -0.62
GTF3C1-203ENST00000562609 MYCNOSP40205 109 aa11.17□□□□□ -0.62
GTF3C1-203ENST00000562609 KLRD1Q13241 179 aa11.17□□□□□ -0.62
GTF3C1-203ENST00000562609 Q6ZUT4 128 aa11.17□□□□□ -0.62
GTF3C1-203ENST00000562609 WFDC3Q8IUB2 231 aa11.17□□□□□ -0.62
GTF3C1-203ENST00000562609 RALYQ9UKM9 306 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-203ENST00000562609 TRBV7-9A0A0J9YWB2 115 aa11.17□□□□□ -0.62
GTF3C1-203ENST00000562609 A0A1B0GUT8 65 aa11.17□□□□□ -0.62
GTF3C1-203ENST00000562609 GFRALQ6UXV0 394 aa11.17□□□□□ -0.62
GTF3C1-203ENST00000562609 CEND1Q8N111 149 aa11.17□□□□□ -0.62
GTF3C1-203ENST00000562609 OSR1Q8TAX0 266 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-203ENST00000562609 IFI27L1Q96BM0 104 aa11.17□□□□□ -0.62
GTF3C1-203ENST00000562609 C15orf65H3BRN8 121 aa11.17□□□□□ -0.62
GTF3C1-203ENST00000562609 PRRG2O14669 202 aa11.17□□□□□ -0.62
GTF3C1-203ENST00000562609 GLRXP35754 106 aa11.17□□□□□ -0.62
GTF3C1-203ENST00000562609 CFHR2P36980 270 aa11.17□□□□□ -0.62
GTF3C1-203ENST00000562609 SSBP2P81877 361 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-203ENST00000562609 ZNF134P52741 427 aa11.16□□□□□ -0.62
GTF3C1-203ENST00000562609 PATE2Q6UY27 113 aa11.16□□□□□ -0.62
GTF3C1-203ENST00000562609 C1orf229Q6ZS94 237 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-203ENST00000562609 LEAP2Q969E1 77 aa11.16□□□□□ -0.62
GTF3C1-203ENST00000562609 TM2D2Q9BX73 214 aa11.16□□□□□ -0.62
GTF3C1-203ENST00000562609 UFC1Q9Y3C8 167 aa11.16□□□□□ -0.62
GTF3C1-203ENST00000562609 TRBV25-1A0A075B6N4 114 aa11.16□□□□□ -0.62
GTF3C1-203ENST00000562609 SRRM5B3KS81 715 aa11.16□□□□□ -0.62
GTF3C1-203ENST00000562609 FHL3Q13643 280 aa11.16□□□□□ -0.62
GTF3C1-203ENST00000562609 IFI27L2Q9H2X8 130 aa11.16□□□□□ -0.62
GTF3C1-203ENST00000562609 SPTBN1Q01082 2364 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-203ENST00000562609 hADV38S2A0JD32 116 aa11.15□□□□□ -0.62
GTF3C1-203ENST00000562609 CT45A10P0DMU9 189 aa11.15□□□□□ -0.62
GTF3C1-203ENST00000562609 CD40P25942 277 aa11.15□□□□□ -0.62
GTF3C1-203ENST00000562609 CCL8P80075 99 aa11.15□□□□□ -0.62
GTF3C1-203ENST00000562609 CIARTQ8N365 385 aaPredicted RBP11.15□□□□□ -0.62
GTF3C1-203ENST00000562609 GLMPQ8WWB7 406 aa11.15□□□□□ -0.62
GTF3C1-203ENST00000562609 COL12A1Q99715 3063 aa11.15□□□□□ -0.62
GTF3C1-203ENST00000562609 CNIH1O95406 144 aa11.15□□□□□ -0.62
GTF3C1-203ENST00000562609 HBDP02042 147 aa11.15□□□□□ -0.62
GTF3C1-203ENST00000562609 CD69Q07108 199 aa11.15□□□□□ -0.62
GTF3C1-203ENST00000562609 ZNF714Q96N38 554 aa11.15□□□□□ -0.62
GTF3C1-203ENST00000562609 TPPP3Q9BW30 176 aa11.15□□□□□ -0.62
GTF3C1-203ENST00000562609 PRNDQ9UKY0 176 aa11.15□□□□□ -0.62
GTF3C1-203ENST00000562609 ARFGEF3Q5TH69 2177 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms