RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 CDC42SE1Q9NRR8 79 aa0.47□□□□□ -2.33
CHD9-204ENST00000561869 LAMTOR3Q9UHA4 124 aa0.47□□□□□ -2.33
CHD9-204ENST00000561869 U3KQ87 197 aa0.47□□□□□ -2.33
CHD9-204ENST00000561869 UNC13CQ8NB66 2214 aa0.47□□□□□ -2.33
CHD9-204ENST00000561869 NUP210LQ5VU65 1888 aa0.47□□□□□ -2.33
CHD9-204ENST00000561869 LAMB4A4D0S4 1761 aa0.47□□□□□ -2.33
CHD9-204ENST00000561869 PIK3C2AO00443 1686 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 RTL9Q8NET4 1388 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 HEATR1Q9H583 2144 aaKnown RBP0.46□□□□□ -2.34
CHD9-204ENST00000561869 IGHV1-58A0A0C4DH39 117 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 GPR31O00270 319 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 CCL25O15444 150 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 ERC2-IT1O76042 136 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 IFNA4P05014 189 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 FABP1P07148 127 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 NEFHP12036 1026 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 TMBIM6P55061 237 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 VBP1P61758 197 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 CDK6Q00534 326 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 KLRD1Q13241 179 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 RTL8BQ17RB0 113 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 FKBP1CQ5VVH2 108 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 ARPINQ7Z6K5 226 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 OR5AS1Q8N127 324 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 ST6GALNAC3Q8NDV1 305 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 Q8TAT8 98 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 CHCHD1Q96BP2 118 aaKnown RBP0.46□□□□□ -2.34
CHD9-204ENST00000561869 HYLS1Q96M11 299 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 OR2H1Q9GZK4 316 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 MAP1LC3BQ9GZQ8 125 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 ORMDL1Q9P0S3 153 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 ATPIF1Q9UII2 106 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 RNF11Q9Y3C5 154 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 NUBP2Q9Y5Y2 271 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 COL1A1P02452 1464 aaPredicted RBP0.46□□□□□ -2.34
CHD9-204ENST00000561869 CECR2Q9BXF3 1484 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 TECPR2O15040 1411 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 TRAPPC8Q9Y2L5 1435 aa0.46□□□□□ -2.34
CHD9-204ENST00000561869 MYLKQ15746 1914 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 ALPK3Q96L96 1907 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 TRDV1A0A1B0GX56 115 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 A0A1W2PRE2 83 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 ODAMA1E959 279 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 MAP1LC3B2A6NCE7 125 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 H7BYZ3 331 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 K7ERJ3 54 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 M0R233 179 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 CXCL8P10145 99 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 ZNF25P17030 456 aaPredicted RBP0.45□□□□□ -2.34
CHD9-204ENST00000561869 RPL35P42766 123 aaKnown RBP0.45□□□□□ -2.34
CHD9-204ENST00000561869 HBBP68871 147 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 TFAMQ00059 246 aaKnown RBP0.45□□□□□ -2.34
CHD9-204ENST00000561869 MSMO1Q15800 293 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 SPRNQ5BIV9 151 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 FAM74A1Q5RGS3 127 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 DCUN1D2Q6PH85 259 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 TMEM14EPQ6UXP3 125 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 LINC00322Q6ZN03 302 aaPredicted RBP0.45□□□□□ -2.34
CHD9-204ENST00000561869 STX12Q86Y82 276 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 IFT20Q8IY31 132 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 FAM24BQ8N5W8 94 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 PSMF1Q92530 271 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 RAB37Q96AX2 223 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 ZNF714Q96N38 554 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 DDA1Q9BW61 102 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 LRTM1Q9HBL6 345 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 OTORQ9NRC9 128 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 CNTRLQ7Z7A1 2325 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 MYO18AQ92614 2054 aaKnown RBP0.45□□□□□ -2.34
CHD9-204ENST00000561869 KIAA1107Q9UPP5 1409 aa0.45□□□□□ -2.34
CHD9-204ENST00000561869 ASCC3Q8N3C0 2202 aaKnown RBP0.45□□□□□ -2.34
CHD9-204ENST00000561869 COL24A1Q17RW2 1714 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 A0A1B0GV72 72 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 hDV103S1A0JD37 113 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 H3BQV1 296 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 PGRMC1O00264 195 aaKnown RBP0.44□□□□□ -2.34
CHD9-204ENST00000561869 RER1O15258 196 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 CST7O76096 145 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 COX7CP15954 63 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 B2MP61769 119 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 PSG9Q00887 426 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 PRB3Q04118 309 aaPredicted RBP0.44□□□□□ -2.34
CHD9-204ENST00000561869 TOMM20LQ6UXN7 152 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 ANGPTL5Q86XS5 388 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 FAM216BQ8N7L0 139 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.44□□□□□ -2.34
CHD9-204ENST00000561869 OR10AG1Q8NH19 301 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 OR4K15Q8NH41 348 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 CCL4L1Q8NHW4 92 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 ZNF431Q8TF32 576 aaPredicted RBP0.44□□□□□ -2.34
CHD9-204ENST00000561869 DIRC1Q969H9 104 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 ISOC1Q96CN7 298 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 AMELYQ99218 206 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 GGACTQ9BVM4 153 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 TAS2R7Q9NYW3 318 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 TMEM14CQ9P0S9 112 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 V9GYQ6 96 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 PEAK1Q9H792 1746 aa0.44□□□□□ -2.34
CHD9-204ENST00000561869 MYO5AQ9Y4I1 1855 aaKnown RBP0.44□□□□□ -2.34
CHD9-204ENST00000561869 PBRM1Q86U86 1689 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms