RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 NDPQ00604 133 aa8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 RSPO3Q9BXY4 272 aaPredicted RBP8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 SCN5AQ14524 2016 aa8.32□□□□□ -1.08
GTF3C1-202ENST00000561623 SRRM5B3KS81 715 aa8.31□□□□□ -1.08
GTF3C1-202ENST00000561623 K7EP13 123 aa8.31□□□□□ -1.08
GTF3C1-202ENST00000561623 GAGE1Q13065 139 aa8.31□□□□□ -1.08
GTF3C1-202ENST00000561623 ZNF562Q6V9R5 426 aa8.31□□□□□ -1.08
GTF3C1-202ENST00000561623 IL17RELQ6ZVW7 336 aa8.31□□□□□ -1.08
GTF3C1-202ENST00000561623 TNFRSF14Q92956 283 aa8.31□□□□□ -1.08
GTF3C1-202ENST00000561623 CADP27708 2225 aa8.31□□□□□ -1.08
GTF3C1-202ENST00000561623 A0A1B0GWJ7 208 aa8.31□□□□□ -1.08
GTF3C1-202ENST00000561623 LINC01559Q495D7 138 aa8.31□□□□□ -1.08
GTF3C1-202ENST00000561623 ZNF625Q96I27 306 aaPredicted RBP8.31□□□□□ -1.08
GTF3C1-202ENST00000561623 H0YJW9 148 aa8.31□□□□□ -1.08
GTF3C1-202ENST00000561623 TRBV6-6A0A0A6YYG2 114 aa8.31□□□□□ -1.08
GTF3C1-202ENST00000561623 ERCC8Q13216 396 aa8.31□□□□□ -1.08
GTF3C1-202ENST00000561623 ZNF876PQ49A33 203 aa8.31□□□□□ -1.08
GTF3C1-202ENST00000561623 IGHV2-26A0A0B4J1V2 119 aa8.31□□□□□ -1.08
GTF3C1-202ENST00000561623 TRPM7Q96QT4 1865 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 IGHV1-24A0A0C4DH33 117 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 IGLV3-19P01714 112 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 PAX8Q06710 450 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 ETDBQ3ZM63 59 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 S100A7L2Q5SY68 101 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 MED12Q93074 2177 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 RNASE2P10153 161 aaKnown RBP8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 C15orf32Q32M92 178 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 RCHY1Q96PM5 261 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 ANK1P16157 1881 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 K7EP34 96 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 KLRD1Q13241 179 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 SUMO4Q6EEV6 95 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 DOCK7Q96N67 2140 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 ZNRD1Q9P1U0 126 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 GAGE2AQ6NT46 116 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 C8orf49Q96NF6 230 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 KLF12Q9Y4X4 402 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 V9GYV3 84 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 LRRK1Q38SD2 2015 aa8.3□□□□□ -1.08
GTF3C1-202ENST00000561623 TET1Q8NFU7 2136 aa8.29□□□□□ -1.08
GTF3C1-202ENST00000561623 IL18BPO95998 194 aa8.29□□□□□ -1.08
GTF3C1-202ENST00000561623 IGKV1-16P04430 117 aa8.29□□□□□ -1.08
GTF3C1-202ENST00000561623 THADAQ6YHU6 1953 aa8.29□□□□□ -1.08
GTF3C1-202ENST00000561623 IGHV1-3A0A0C4DH29 117 aa8.29□□□□□ -1.08
GTF3C1-202ENST00000561623 K7ERJ3 54 aa8.29□□□□□ -1.08
GTF3C1-202ENST00000561623 ITGB1BP1O14713 200 aa8.29□□□□□ -1.08
GTF3C1-202ENST00000561623 OVOL1O14753 267 aa8.29□□□□□ -1.08
GTF3C1-202ENST00000561623 PLEKHB2Q96CS7 222 aa8.29□□□□□ -1.08
GTF3C1-202ENST00000561623 PTPRDP23468 1912 aa8.29□□□□□ -1.08
GTF3C1-202ENST00000561623 Q6ZS49 121 aa8.29□□□□□ -1.08
GTF3C1-202ENST00000561623 CFPP27918 469 aa8.29□□□□□ -1.08
GTF3C1-202ENST00000561623 ADARB2-AS1A8MUL3 147 aa8.29□□□□□ -1.08
GTF3C1-202ENST00000561623 WNT2P09544 360 aa8.29□□□□□ -1.08
GTF3C1-202ENST00000561623 MORN3Q6PF18 240 aaPredicted RBP8.29□□□□□ -1.08
GTF3C1-202ENST00000561623 A0A087WWL8 130 aa8.29□□□□□ -1.08
GTF3C1-202ENST00000561623 IGHV1-8P0DP01 117 aa8.29□□□□□ -1.08
GTF3C1-202ENST00000561623 BVES-AS1Q5T3Y7 98 aa8.29□□□□□ -1.08
GTF3C1-202ENST00000561623 SPXQ9BT56 116 aa8.29□□□□□ -1.08
GTF3C1-202ENST00000561623 THBDP07204 575 aa8.28□□□□□ -1.08
GTF3C1-202ENST00000561623 GFRA4Q9GZZ7 299 aa8.28□□□□□ -1.08
GTF3C1-202ENST00000561623 LGALS1P09382 135 aaKnown RBP8.28□□□□□ -1.08
GTF3C1-202ENST00000561623 HAPLN4Q86UW8 402 aa8.28□□□□□ -1.08
GTF3C1-202ENST00000561623 GTF3C1Q12789 2109 aa8.28□□□□□ -1.08
GTF3C1-202ENST00000561623 IGKV1D-17A0A075B6S4 117 aa8.28□□□□□ -1.08
GTF3C1-202ENST00000561623 SRRM4A7MD48 611 aaKnown RBP8.28□□□□□ -1.08
GTF3C1-202ENST00000561623 YPEL3P61236 119 aaPredicted RBP8.28□□□□□ -1.08
GTF3C1-202ENST00000561623 VWC2Q2TAL6 325 aa8.28□□□□□ -1.08
GTF3C1-202ENST00000561623 TEX43Q6ZNM6 134 aa8.28□□□□□ -1.08
GTF3C1-202ENST00000561623 TRGV11A0A075B6L2 103 aa8.28□□□□□ -1.08
GTF3C1-202ENST00000561623 C9orf153Q5TBE3 101 aa8.28□□□□□ -1.08
GTF3C1-202ENST00000561623 PLSCR4Q9NRQ2 329 aa8.28□□□□□ -1.08
GTF3C1-202ENST00000561623 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.27□□□□□ -1.08
GTF3C1-202ENST00000561623 CD59P13987 128 aa8.27□□□□□ -1.08
GTF3C1-202ENST00000561623 AZU1P20160 251 aa8.27□□□□□ -1.08
GTF3C1-202ENST00000561623 PAX4O43316 350 aa8.27□□□□□ -1.09
GTF3C1-202ENST00000561623 ANAPC10Q9UM13 185 aa8.27□□□□□ -1.09
GTF3C1-202ENST00000561623 WIPF3A6NGB9 483 aa8.27□□□□□ -1.09
GTF3C1-202ENST00000561623 TMEM219Q86XT9 240 aa8.27□□□□□ -1.09
GTF3C1-202ENST00000561623 C1orf147Q96MC9 270 aaPredicted RBP8.27□□□□□ -1.09
GTF3C1-202ENST00000561623 PI4KAP42356 2102 aa8.27□□□□□ -1.09
GTF3C1-202ENST00000561623 COX8AP10176 69 aa8.27□□□□□ -1.09
GTF3C1-202ENST00000561623 GAFA1Q96PS6 74 aa8.27□□□□□ -1.09
GTF3C1-202ENST00000561623 B4DSR2 109 aa8.27□□□□□ -1.09
GTF3C1-202ENST00000561623 IGKV1-39P01597 117 aa8.27□□□□□ -1.09
GTF3C1-202ENST00000561623 IGKV1D-39P04432 117 aa8.27□□□□□ -1.09
GTF3C1-202ENST00000561623 A0A1W2PPM0 123 aa8.27□□□□□ -1.09
GTF3C1-202ENST00000561623 VCYO14598 125 aa8.27□□□□□ -1.09
GTF3C1-202ENST00000561623 ATP6V0BQ99437 205 aa8.27□□□□□ -1.09
GTF3C1-202ENST00000561623 CHCHD5Q9BSY4 110 aa8.27□□□□□ -1.09
GTF3C1-202ENST00000561623 DOCK11Q5JSL3 2073 aa8.26□□□□□ -1.09
GTF3C1-202ENST00000561623 WDR90Q96KV7 1748 aa8.26□□□□□ -1.09
GTF3C1-202ENST00000561623 GAGE12HA6NDE8 117 aa8.26□□□□□ -1.09
GTF3C1-202ENST00000561623 DUSP14O95147 198 aaKnown RBP8.26□□□□□ -1.09
GTF3C1-202ENST00000561623 SLC25A16P16260 332 aa8.26□□□□□ -1.09
GTF3C1-202ENST00000561623 TRGV4A0A0C4DH28 118 aa8.26□□□□□ -1.09
GTF3C1-202ENST00000561623 SMIM27A0A1W2PRY6 76 aa8.26□□□□□ -1.09
GTF3C1-202ENST00000561623 LINC01549A6NIU2 74 aa8.26□□□□□ -1.09
GTF3C1-202ENST00000561623 CEACAM8P31997 349 aaPredicted RBP8.26□□□□□ -1.09
GTF3C1-202ENST00000561623 KLHL30-AS1Q8NEE0 82 aa8.26□□□□□ -1.09
GTF3C1-202ENST00000561623 DTX2Q86UW9 622 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms