RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 CXCL2P19875 107 aa11.16□□□□□ -0.62
CCDC113-203ENST00000561517 CXCL3P19876 107 aa11.16□□□□□ -0.62
CCDC113-203ENST00000561517 H2BFSP57053 126 aa11.16□□□□□ -0.62
CCDC113-203ENST00000561517 OPCMLQ14982 345 aa11.16□□□□□ -0.62
CCDC113-203ENST00000561517 MORN5Q5VZ52 161 aa11.16□□□□□ -0.62
CCDC113-203ENST00000561517 C10orf113Q5VZT2 155 aa11.16□□□□□ -0.62
CCDC113-203ENST00000561517 Q6ZRG5 221 aa11.16□□□□□ -0.62
CCDC113-203ENST00000561517 BPIFA4PQ86YQ2 179 aa11.16□□□□□ -0.62
CCDC113-203ENST00000561517 LINC00476Q8WZB0 136 aa11.16□□□□□ -0.62
CCDC113-203ENST00000561517 OR5AC2Q9NZP5 309 aa11.16□□□□□ -0.62
CCDC113-203ENST00000561517 SMIM9A6NGZ8 99 aa11.15□□□□□ -0.62
CCDC113-203ENST00000561517 DUSP14O95147 198 aaKnown RBP11.15□□□□□ -0.62
CCDC113-203ENST00000561517 NHLH2Q02577 135 aa11.15□□□□□ -0.62
CCDC113-203ENST00000561517 BAXQ07812 192 aa11.15□□□□□ -0.62
CCDC113-203ENST00000561517 SLC25A31Q9H0C2 315 aa11.15□□□□□ -0.62
CCDC113-203ENST00000561517 SLC39A9Q9NUM3 307 aa11.15□□□□□ -0.62
CCDC113-203ENST00000561517 HYDINQ4G0P3 5121 aa11.14□□□□□ -0.63
CCDC113-203ENST00000561517 MPDU1O75352 247 aa11.14□□□□□ -0.63
CCDC113-203ENST00000561517 FGF7P21781 194 aa11.14□□□□□ -0.63
CCDC113-203ENST00000561517 HLA-DMBP28068 263 aa11.14□□□□□ -0.63
CCDC113-203ENST00000561517 CNN1P51911 297 aaKnown RBP11.14□□□□□ -0.63
CCDC113-203ENST00000561517 B2MP61769 119 aa11.14□□□□□ -0.63
CCDC113-203ENST00000561517 PSG3Q16557 428 aa11.14□□□□□ -0.63
CCDC113-203ENST00000561517 LRRC37A5PQ49AS3 106 aa11.14□□□□□ -0.63
CCDC113-203ENST00000561517 LCN15Q6UWW0 184 aa11.14□□□□□ -0.63
CCDC113-203ENST00000561517 ZNF738Q8NE65 137 aa11.14□□□□□ -0.63
CCDC113-203ENST00000561517 OR1L4Q8NGR5 311 aa11.14□□□□□ -0.63
CCDC113-203ENST00000561517 PFDN5Q99471 154 aa11.14□□□□□ -0.63
CCDC113-203ENST00000561517 SLC50A1Q9BRV3 221 aa11.14□□□□□ -0.63
CCDC113-203ENST00000561517 ZNF331Q9NQX6 463 aaPredicted RBP11.14□□□□□ -0.63
CCDC113-203ENST00000561517 C11orf94C9JXX5 98 aa11.13□□□□□ -0.63
CCDC113-203ENST00000561517 SSNA1O43805 119 aa11.13□□□□□ -0.63
CCDC113-203ENST00000561517 C1orf158Q8N1D5 194 aa11.13□□□□□ -0.63
CCDC113-203ENST00000561517 OR11H7Q8NGC8 314 aa11.13□□□□□ -0.63
CCDC113-203ENST00000561517 OR5C1Q8NGR4 320 aa11.13□□□□□ -0.63
CCDC113-203ENST00000561517 LRRC20Q8TCA0 184 aa11.13□□□□□ -0.63
CCDC113-203ENST00000561517 PPP1R1CQ8WVI7 109 aa11.13□□□□□ -0.63
CCDC113-203ENST00000561517 RNF126Q9BV68 326 aa11.13□□□□□ -0.63
CCDC113-203ENST00000561517 CELA1Q9UNI1 258 aa11.13□□□□□ -0.63
CCDC113-203ENST00000561517 PXMP4Q9Y6I8 212 aa11.13□□□□□ -0.63
CCDC113-203ENST00000561517 AMBPP02760 352 aa11.12□□□□□ -0.63
CCDC113-203ENST00000561517 IGLC2P0DOY2 106 aa11.12□□□□□ -0.63
CCDC113-203ENST00000561517 OR8A1Q8NGG7 326 aa11.12□□□□□ -0.63
CCDC113-203ENST00000561517 IGF2BP2-AS1Q96M15 143 aa11.12□□□□□ -0.63
CCDC113-203ENST00000561517 NPCDR1Q9BY65 106 aa11.12□□□□□ -0.63
CCDC113-203ENST00000561517 GOLT1BQ9Y3E0 138 aa11.12□□□□□ -0.63
CCDC113-203ENST00000561517 IGHV3OR16-12A0A075B7B8 117 aa11.11□□□□□ -0.63
CCDC113-203ENST00000561517 TRAV5A0A0B4J249 113 aa11.11□□□□□ -0.63
CCDC113-203ENST00000561517 TMEM189A5PLL7 270 aa11.11□□□□□ -0.63
CCDC113-203ENST00000561517 H3BQ15 152 aa11.11□□□□□ -0.63
CCDC113-203ENST00000561517 CRXO43186 299 aaPredicted RBP11.11□□□□□ -0.63
CCDC113-203ENST00000561517 MPC2O95563 127 aa11.11□□□□□ -0.63
CCDC113-203ENST00000561517 Q6ZTC4 211 aa11.11□□□□□ -0.63
CCDC113-203ENST00000561517 C2CD4CQ8TF44 421 aa11.11□□□□□ -0.63
CCDC113-203ENST00000561517 RPUSD4Q96CM3 377 aaKnown RBP11.11□□□□□ -0.63
CCDC113-203ENST00000561517 SAT2Q96F10 170 aaPredicted RBP11.11□□□□□ -0.63
CCDC113-203ENST00000561517 RFNGQ9Y644 331 aa11.11□□□□□ -0.63
CCDC113-203ENST00000561517 M0R2Z0 102 aa11.1□□□□□ -0.63
CCDC113-203ENST00000561517 SLC17A3O00476 420 aa11.1□□□□□ -0.63
CCDC113-203ENST00000561517 LY6G6CO95867 125 aa11.1□□□□□ -0.63
CCDC113-203ENST00000561517 SNRPCP09234 159 aaKnown RBP11.1□□□□□ -0.63
CCDC113-203ENST00000561517 PET100P0DJ07 73 aa11.1□□□□□ -0.63
CCDC113-203ENST00000561517 TCTAP57738 103 aa11.1□□□□□ -0.63
CCDC113-203ENST00000561517 HIST1H1AQ02539 215 aaPredicted RBP11.1□□□□□ -0.63
CCDC113-203ENST00000561517 GUK1Q16774 197 aa11.1□□□□□ -0.63
CCDC113-203ENST00000561517 SPINK13Q1W4C9 94 aa11.1□□□□□ -0.63
CCDC113-203ENST00000561517 C12orf74Q32Q52 190 aa11.1□□□□□ -0.63
CCDC113-203ENST00000561517 THAP6Q8TBB0 222 aa11.1□□□□□ -0.63
CCDC113-203ENST00000561517 TRAV10A0A0B4J240 114 aa11.09□□□□□ -0.63
CCDC113-203ENST00000561517 H3BTX0 84 aa11.09□□□□□ -0.63
CCDC113-203ENST00000561517 BOLA2-SMG1P6H3BVE0 249 aa11.09□□□□□ -0.63
CCDC113-203ENST00000561517 ZNF253O75346 499 aa11.09□□□□□ -0.63
CCDC113-203ENST00000561517 PTTG1O95997 202 aa11.09□□□□□ -0.63
CCDC113-203ENST00000561517 HBE1P02100 147 aa11.09□□□□□ -0.63
CCDC113-203ENST00000561517 CLINT1Q14677 625 aa11.09□□□□□ -0.63
CCDC113-203ENST00000561517 WDR61Q9GZS3 305 aaKnown RBP11.09□□□□□ -0.63
CCDC113-203ENST00000561517 TMEM14CQ9P0S9 112 aa11.09□□□□□ -0.63
CCDC113-203ENST00000561517 INSP01308 110 aa11.08□□□□□ -0.64
CCDC113-203ENST00000561517 GCSAMLQ5JQS6 135 aa11.08□□□□□ -0.64
CCDC113-203ENST00000561517 LGALS9CQ6DKI2 356 aa11.08□□□□□ -0.64
CCDC113-203ENST00000561517 ZNF586Q9NXT0 402 aa11.08□□□□□ -0.64
CCDC113-203ENST00000561517 HSPB11Q9Y547 144 aa11.08□□□□□ -0.64
CCDC113-203ENST00000561517 ALG5Q9Y673 324 aa11.08□□□□□ -0.64
CCDC113-203ENST00000561517 SPART-AS1P0CW21 52 aa11.07□□□□□ -0.64
CCDC113-203ENST00000561517 RHOBP62745 196 aa11.07□□□□□ -0.64
CCDC113-203ENST00000561517 RRN3P1Q2M238 152 aa11.07□□□□□ -0.64
CCDC113-203ENST00000561517 BAP18Q8IXM2 172 aa11.07□□□□□ -0.64
CCDC113-203ENST00000561517 ATP5SQ99766 215 aa11.07□□□□□ -0.64
CCDC113-203ENST00000561517 KCNIP2Q9NS61 270 aa11.07□□□□□ -0.64
CCDC113-203ENST00000561517 MBD2Q9UBB5 411 aa11.07□□□□□ -0.64
CCDC113-203ENST00000561517 DKK2Q9UBU2 259 aa11.07□□□□□ -0.64
CCDC113-203ENST00000561517 APLNQ9ULZ1 77 aa11.07□□□□□ -0.64
CCDC113-203ENST00000561517 TRBV19A0A075B6N1 114 aa11.06□□□□□ -0.64
CCDC113-203ENST00000561517 TEX48A0A1B0GUV7 120 aa11.06□□□□□ -0.64
CCDC113-203ENST00000561517 LOC102723971A0A1B0GUV8 181 aa11.06□□□□□ -0.64
CCDC113-203ENST00000561517 IGLL5B9A064 214 aa11.06□□□□□ -0.64
CCDC113-203ENST00000561517 PRAC2D3DTV9 90 aa11.06□□□□□ -0.64
CCDC113-203ENST00000561517 PRB4P10163 310 aaPredicted RBP11.06□□□□□ -0.64
CCDC113-203ENST00000561517 HIST1H1EP10412 219 aaKnown RBP11.06□□□□□ -0.64
CCDC113-203ENST00000561517 RPL12P30050 165 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms