RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 FAM78BQ5VT40 261 aa7.41□□□□□ -1.22
HERC1-212ENST00000561348 BPIFA4PQ86YQ2 179 aa7.41□□□□□ -1.22
HERC1-212ENST00000561348 C17orf77Q96MU5 243 aa7.41□□□□□ -1.22
HERC1-212ENST00000561348 PFDN5Q99471 154 aa7.41□□□□□ -1.22
HERC1-212ENST00000561348 NPCDR1Q9BY65 106 aa7.41□□□□□ -1.22
HERC1-212ENST00000561348 SAV1Q9H4B6 383 aaPredicted RBP7.41□□□□□ -1.22
HERC1-212ENST00000561348 RNF24Q9Y225 148 aa7.41□□□□□ -1.22
HERC1-212ENST00000561348 TP53TG1Q9Y2A0 90 aa7.41□□□□□ -1.22
HERC1-212ENST00000561348 HSPB11Q9Y547 144 aa7.41□□□□□ -1.22
HERC1-212ENST00000561348 C17orf112F2Z3M2 114 aa7.4□□□□□ -1.22
HERC1-212ENST00000561348 SOCS3O14543 225 aa7.4□□□□□ -1.22
HERC1-212ENST00000561348 MPDU1O75352 247 aa7.4□□□□□ -1.22
HERC1-212ENST00000561348 HLA-DRB4P13762 266 aa7.4□□□□□ -1.22
HERC1-212ENST00000561348 HIST1H1AQ02539 215 aaPredicted RBP7.4□□□□□ -1.22
HERC1-212ENST00000561348 VWC2Q2TAL6 325 aa7.4□□□□□ -1.22
HERC1-212ENST00000561348 SAMD13Q5VXD3 122 aa7.4□□□□□ -1.22
HERC1-212ENST00000561348 FOXI2Q6ZQN5 318 aa7.4□□□□□ -1.22
HERC1-212ENST00000561348 GATAD1Q8WUU5 269 aa7.4□□□□□ -1.22
HERC1-212ENST00000561348 BLNKQ8WV28 456 aa7.4□□□□□ -1.22
HERC1-212ENST00000561348 ATP5SQ99766 215 aa7.4□□□□□ -1.22
HERC1-212ENST00000561348 WDR61Q9GZS3 305 aaKnown RBP7.4□□□□□ -1.22
HERC1-212ENST00000561348 MFFQ9GZY8 342 aa7.4□□□□□ -1.22
HERC1-212ENST00000561348 SLC35B3Q9H1N7 401 aa7.4□□□□□ -1.22
HERC1-212ENST00000561348 HLA-DRB4X5D2U9 266 aa7.4□□□□□ -1.22
HERC1-212ENST00000561348 HUWE1Q7Z6Z7 4374 aaKnown RBP7.4□□□□□ -1.23
HERC1-212ENST00000561348 FXYD6-FXYD2A0A087WZ82 144 aa7.39□□□□□ -1.23
HERC1-212ENST00000561348 TRAV8-2A0A0B4J237 113 aa7.39□□□□□ -1.23
HERC1-212ENST00000561348 EMP1P54849 157 aa7.39□□□□□ -1.23
HERC1-212ENST00000561348 PSG9Q00887 426 aa7.39□□□□□ -1.23
HERC1-212ENST00000561348 FFAR4Q5NUL3 377 aa7.39□□□□□ -1.23
HERC1-212ENST00000561348 SPATA31B1PQ5VZV4 182 aa7.39□□□□□ -1.23
HERC1-212ENST00000561348 IL17DQ8TAD2 202 aa7.39□□□□□ -1.23
HERC1-212ENST00000561348 TMEM208Q9BTX3 173 aa7.39□□□□□ -1.23
HERC1-212ENST00000561348 C1QTNF4Q9BXJ3 329 aa7.39□□□□□ -1.23
HERC1-212ENST00000561348 SEPSECSQ9HD40 501 aaKnown RBP7.39□□□□□ -1.23
HERC1-212ENST00000561348 TIMM9Q9Y5J7 89 aa7.39□□□□□ -1.23
HERC1-212ENST00000561348 A0A0J9YX75 114 aa7.38□□□□□ -1.23
HERC1-212ENST00000561348 ZNF705FA8MVS1 300 aaPredicted RBP7.38□□□□□ -1.23
HERC1-212ENST00000561348 H3BQ15 152 aa7.38□□□□□ -1.23
HERC1-212ENST00000561348 EIF3GO75821 320 aaKnown RBP eCLIP7.38□□□□□ -1.23
HERC1-212ENST00000561348 PYYP10082 97 aa7.38□□□□□ -1.23
HERC1-212ENST00000561348 CNN1P51911 297 aaKnown RBP7.38□□□□□ -1.23
HERC1-212ENST00000561348 PSG3Q16557 428 aa7.38□□□□□ -1.23
HERC1-212ENST00000561348 LCN15Q6UWW0 184 aa7.38□□□□□ -1.23
HERC1-212ENST00000561348 MIR17HGQ75NE6 70 aa7.38□□□□□ -1.23
HERC1-212ENST00000561348 RPUSD4Q96CM3 377 aaKnown RBP7.38□□□□□ -1.23
HERC1-212ENST00000561348 KCNIP2Q9NS61 270 aa7.38□□□□□ -1.23
HERC1-212ENST00000561348 RFNGQ9Y644 331 aa7.38□□□□□ -1.23
HERC1-212ENST00000561348 IGHV4-28A0A0C4DH34 117 aa7.37□□□□□ -1.23
HERC1-212ENST00000561348 BOLA2-SMG1P6H3BVE0 249 aa7.37□□□□□ -1.23
HERC1-212ENST00000561348 J3KRW8 73 aa7.37□□□□□ -1.23
HERC1-212ENST00000561348 M0R2Z0 102 aa7.37□□□□□ -1.23
HERC1-212ENST00000561348 SLC17A3O00476 420 aa7.37□□□□□ -1.23
HERC1-212ENST00000561348 DUSP14O95147 198 aaKnown RBP7.37□□□□□ -1.23
HERC1-212ENST00000561348 GIG44P09565 113 aaPredicted RBP7.37□□□□□ -1.23
HERC1-212ENST00000561348 NANOS2P60321 138 aaKnown RBP7.37□□□□□ -1.23
HERC1-212ENST00000561348 SPINK13Q1W4C9 94 aa7.37□□□□□ -1.23
HERC1-212ENST00000561348 TMEM41BQ5BJD5 291 aa7.37□□□□□ -1.23
HERC1-212ENST00000561348 Q5BKY6 102 aa7.37□□□□□ -1.23
HERC1-212ENST00000561348 HSD17B11Q8NBQ5 300 aa7.37□□□□□ -1.23
HERC1-212ENST00000561348 INO80EQ8NBZ0 244 aaPredicted RBP7.37□□□□□ -1.23
HERC1-212ENST00000561348 OR2T35Q8NGX2 323 aa7.37□□□□□ -1.23
HERC1-212ENST00000561348 WFDC1Q9HC57 220 aa7.37□□□□□ -1.23
HERC1-212ENST00000561348 TRAV12-2A0A075B6T6 113 aa7.36□□□□□ -1.23
HERC1-212ENST00000561348 A0A087X0K7 114 aa7.36□□□□□ -1.23
HERC1-212ENST00000561348 SMLR1H3BR10 107 aa7.36□□□□□ -1.23
HERC1-212ENST00000561348 OR7C2O60412 319 aa7.36□□□□□ -1.23
HERC1-212ENST00000561348 GIPP09681 153 aaPredicted RBP7.36□□□□□ -1.23
HERC1-212ENST00000561348 OR10J4P0C629 311 aa7.36□□□□□ -1.23
HERC1-212ENST00000561348 HTN1P15515 57 aa7.36□□□□□ -1.23
HERC1-212ENST00000561348 OR10J6PQ8NGY7 276 aa7.36□□□□□ -1.23
HERC1-212ENST00000561348 C11orf45Q8TAV5 145 aa7.36□□□□□ -1.23
HERC1-212ENST00000561348 CHAC2Q8WUX2 184 aa7.36□□□□□ -1.23
HERC1-212ENST00000561348 SLC50A1Q9BRV3 221 aa7.36□□□□□ -1.23
HERC1-212ENST00000561348 ZNF586Q9NXT0 402 aa7.36□□□□□ -1.23
HERC1-212ENST00000561348 A0A1W2PPV4 95 aa7.35□□□□□ -1.23
HERC1-212ENST00000561348 PRAC2D3DTV9 90 aa7.35□□□□□ -1.23
HERC1-212ENST00000561348 MRPS12O15235 138 aaKnown RBP7.35□□□□□ -1.23
HERC1-212ENST00000561348 HMGB3O15347 200 aaKnown RBP7.35□□□□□ -1.23
HERC1-212ENST00000561348 FAM122CQ6P4D5 195 aa7.35□□□□□ -1.23
HERC1-212ENST00000561348 ZNF767PQ75MW2 155 aa7.35□□□□□ -1.23
HERC1-212ENST00000561348 EXOC3-AS1Q8N2X6 119 aa7.35□□□□□ -1.23
HERC1-212ENST00000561348 OR8A1Q8NGG7 326 aa7.35□□□□□ -1.23
HERC1-212ENST00000561348 PAXXQ9BUH6 204 aa7.35□□□□□ -1.23
HERC1-212ENST00000561348 SLC25A2Q9BXI2 301 aa7.35□□□□□ -1.23
HERC1-212ENST00000561348 OR51M1Q9H341 326 aa7.35□□□□□ -1.23
HERC1-212ENST00000561348 HRH4Q9H3N8 390 aa7.35□□□□□ -1.23
HERC1-212ENST00000561348 AAMDCQ9H7C9 122 aa7.35□□□□□ -1.23
HERC1-212ENST00000561348 ZNF331Q9NQX6 463 aaPredicted RBP7.35□□□□□ -1.23
HERC1-212ENST00000561348 FUT9Q9Y231 359 aa7.35□□□□□ -1.23
HERC1-212ENST00000561348 GOLT1BQ9Y3E0 138 aa7.35□□□□□ -1.23
HERC1-212ENST00000561348 RBMY1A1P0DJD3 496 aaKnown RBP7.34□□□□□ -1.23
HERC1-212ENST00000561348 RBMY1CP0DJD4 496 aa7.34□□□□□ -1.23
HERC1-212ENST00000561348 IGLC2P0DOY2 106 aa7.34□□□□□ -1.23
HERC1-212ENST00000561348 HIST1H1EP10412 219 aaKnown RBP7.34□□□□□ -1.23
HERC1-212ENST00000561348 MIFP14174 115 aa7.34□□□□□ -1.23
HERC1-212ENST00000561348 CXCL2P19875 107 aa7.34□□□□□ -1.23
HERC1-212ENST00000561348 ZNF266Q14584 549 aa7.34□□□□□ -1.23
HERC1-212ENST00000561348 ICAM4Q14773 271 aa7.34□□□□□ -1.23
HERC1-212ENST00000561348 RBMY1FQ15415 496 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms