RNA–Protein interactions for RNA: ENST00000560559.1

BLM-209, Transcript of Bloom syndrome RecQ like helicase, human

TSL 3

Gene BLM, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BLM-209	ENST00000560559	C19orf84	I3L1E1	186 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	KLF7	O75840	302 aa	Predicted RBP	3.37	□□□□□ -1.87
BLM-209	ENST00000560559	DHRS3	O75911	302 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	NUDT14	O95848	222 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	IGLV3-19	P01714	112 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	HBE1	P02100	147 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	PRH1	P02810	166 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559		P04436	131 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	SLC25A5	P05141	298 aa	Known RBP	3.37	□□□□□ -1.87
BLM-209	ENST00000560559	PTHLH	P12272	177 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	GATA1	P15976	413 aa	Predicted RBP	3.37	□□□□□ -1.87
BLM-209	ENST00000560559	CRISP2	P16562	243 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	INSL3	P51460	131 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	PPP1CB	P62140	327 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	RPS24	P62847	133 aa	Known RBP	3.37	□□□□□ -1.87
BLM-209	ENST00000560559	RPL31	P62899	125 aa	Known RBP	3.37	□□□□□ -1.87
BLM-209	ENST00000560559	CCL20	P78556	96 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	TGFBR3	Q03167	851 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	IL15RA	Q13261	267 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	WFDC2	Q14508	124 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	LAGE3	Q14657	143 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559		Q499Y3	187 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	TSPO2	Q5TGU0	170 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559		Q6ZS92	163 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	KRTAP7-1	Q8IUC3	87 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	ATOH7	Q8N100	152 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	GPD1L	Q8N335	351 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	SLC25A45	Q8N413	288 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	TPRX1	Q8N7U7	411 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	OR4K13	Q8NH42	304 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	ZNF563	Q8TA94	476 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	FAM213B	Q8TBF2	198 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	ARPC1A	Q92747	370 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	RBMXL1	Q96E39	390 aa	Known RBP	3.37	□□□□□ -1.87
BLM-209	ENST00000560559	SLC25A44	Q96H78	314 aa	Predicted RBP	3.37	□□□□□ -1.87
BLM-209	ENST00000560559	PRELID3A	Q96N28	172 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	VGLL1	Q99990	258 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	3.37	□□□□□ -1.87
BLM-209	ENST00000560559	RNASE7	Q9H1E1	156 aa	Known RBP	3.37	□□□□□ -1.87
BLM-209	ENST00000560559	PLEKHA3	Q9HB20	300 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	RETN	Q9HD89	108 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	ACER3	Q9NUN7	267 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	ZNF835	Q9Y2P0	537 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559		U3KQA8	63 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	SCN8A	Q9UQD0	1980 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	AKAP6	Q13023	2319 aa		3.37	□□□□□ -1.87
BLM-209	ENST00000560559	TENM1	Q9UKZ4	2725 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	TMED7-TICAM2	A0A0A6YYA0	188 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	FAM236D	A0A1B0GTK5	79 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559		A0A1B0GV50	99 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	TMEM262	E9PQX1	116 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	LY6L	H3BQJ8	138 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	CXCL13	O43927	109 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	ZNF324	O75467	553 aa	Predicted RBP	3.36	□□□□□ -1.87
BLM-209	ENST00000560559	TSHB	P01222	138 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	TNF	P01375	233 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	IGHV3-7	P01780	117 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	MRPL3	P09001	348 aa	Known RBP	3.36	□□□□□ -1.87
BLM-209	ENST00000560559	SCT	P09683	121 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	OR9G9	P0C7N8	305 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	FAM236C	P0DP71	79 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	ZNF708	P17019	499 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	KIR2DS2	P43631	304 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	ERVK-16	P61578	105 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	RPL23	P62829	140 aa	Known RBP	3.36	□□□□□ -1.87
BLM-209	ENST00000560559	HERVK_113	P63121	156 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	GGTLC2	Q14390	218 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	TMEM187	Q14656	261 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	ZNF141	Q15928	474 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	ECSCR	Q19T08	205 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	ETDB	Q3ZM63	59 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	TTC32	Q5I0X7	151 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	LCN12	Q6JVE5	192 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	GUSBP11	Q6P575	273 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	SH2D6	Q7Z4S9	175 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	TRPT1	Q86TN4	253 aa	Known RBP	3.36	□□□□□ -1.87
BLM-209	ENST00000560559	ABHD12	Q8N2K0	398 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	TMEM86A	Q8N2M4	240 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	GATD1	Q8NB37	220 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	ZNF740	Q8NDX6	193 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	SGMS2	Q8NHU3	365 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	RDH5	Q92781	318 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	C2orf50	Q96LR7	162 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	MCHR1	Q99705	422 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	SH3BGRL3	Q9H299	93 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	CXCL16	Q9H2A7	254 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	JPT2	Q9H910	190 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	ESM1	Q9NQ30	184 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	C21orf62	Q9NYP8	219 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	HERC2	O95714	4834 aa		3.36	□□□□□ -1.87
BLM-209	ENST00000560559	PLXNA2	O75051	1894 aa		3.35	□□□□□ -1.87
BLM-209	ENST00000560559	CPAMD8	Q8IZJ3	1885 aa		3.35	□□□□□ -1.87
BLM-209	ENST00000560559	TRBV20-1	A0A075B6N2	111 aa		3.35	□□□□□ -1.87
BLM-209	ENST00000560559	TRAV9-1	A0A075B6T8	112 aa		3.35	□□□□□ -1.87
BLM-209	ENST00000560559	SMIM28	A0A1B0GU29	152 aa		3.35	□□□□□ -1.87
BLM-209	ENST00000560559	GGTLC3	B5MD39	225 aa		3.35	□□□□□ -1.87
BLM-209	ENST00000560559	FCN1	O00602	326 aa		3.35	□□□□□ -1.87
BLM-209	ENST00000560559	LSM8	O95777	96 aa	Known RBP	3.35	□□□□□ -1.87
BLM-209	ENST00000560559	IGHM	P01871	453 aa		3.35	□□□□□ -1.87
BLM-209	ENST00000560559	RBP4	P02753	201 aa		3.35	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 59 ms