RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 GALR1P47211 349 aa6.8□□□□□ -1.32
HERC1-209ENST00000560519 BCAP31P51572 246 aa6.8□□□□□ -1.32
HERC1-209ENST00000560519 CAV2P51636 162 aa6.8□□□□□ -1.32
HERC1-209ENST00000560519 LYZP61626 148 aa6.8□□□□□ -1.32
HERC1-209ENST00000560519 TNP2Q05952 138 aa6.8□□□□□ -1.32
HERC1-209ENST00000560519 RAB32Q13637 225 aa6.8□□□□□ -1.32
HERC1-209ENST00000560519 TTC32Q5I0X7 151 aa6.8□□□□□ -1.32
HERC1-209ENST00000560519 FAM78BQ5VT40 261 aa6.8□□□□□ -1.32
HERC1-209ENST00000560519 TMEM14EPQ6UXP3 125 aa6.8□□□□□ -1.32
HERC1-209ENST00000560519 OR8I2Q8N0Y5 310 aa6.8□□□□□ -1.32
HERC1-209ENST00000560519 OR10P1Q8NGE3 313 aa6.8□□□□□ -1.32
HERC1-209ENST00000560519 ASB13Q8WXK3 278 aa6.8□□□□□ -1.32
HERC1-209ENST00000560519 DOK5Q9P104 306 aa6.8□□□□□ -1.32
HERC1-209ENST00000560519 A0A0J9YX75 114 aa6.79□□□□□ -1.32
HERC1-209ENST00000560519 E5RGE8 158 aa6.79□□□□□ -1.32
HERC1-209ENST00000560519 DUSP14O95147 198 aaKnown RBP6.79□□□□□ -1.32
HERC1-209ENST00000560519 METTL15P1P0C7V9 234 aa6.79□□□□□ -1.32
HERC1-209ENST00000560519 TSPOP30536 169 aa6.79□□□□□ -1.32
HERC1-209ENST00000560519 H2BFSP57053 126 aa6.79□□□□□ -1.32
HERC1-209ENST00000560519 GAMTQ14353 236 aa6.79□□□□□ -1.32
HERC1-209ENST00000560519 STX12Q86Y82 276 aa6.79□□□□□ -1.32
HERC1-209ENST00000560519 C1orf158Q8N1D5 194 aa6.79□□□□□ -1.32
HERC1-209ENST00000560519 Q8N1X5 172 aa6.79□□□□□ -1.32
HERC1-209ENST00000560519 PPP1R1CQ8WVI7 109 aa6.79□□□□□ -1.32
HERC1-209ENST00000560519 C16orf92Q96LL3 132 aa6.79□□□□□ -1.32
HERC1-209ENST00000560519 GGACTQ9BVM4 153 aa6.79□□□□□ -1.32
HERC1-209ENST00000560519 LYRM2Q9NU23 88 aaPredicted RBP6.79□□□□□ -1.32
HERC1-209ENST00000560519 SLC45A2Q9UMX9 530 aa6.79□□□□□ -1.32
HERC1-209ENST00000560519 HSPG2P98160 4391 aa6.78□□□□□ -1.32
HERC1-209ENST00000560519 A8MTW9 85 aa6.78□□□□□ -1.32
HERC1-209ENST00000560519 PRSS46E5RG02 174 aa6.78□□□□□ -1.32
HERC1-209ENST00000560519 FNDC10F2Z333 226 aa6.78□□□□□ -1.32
HERC1-209ENST00000560519 ATP5G1P05496 136 aa6.78□□□□□ -1.32
HERC1-209ENST00000560519 ATP5G3P48201 142 aa6.78□□□□□ -1.32
HERC1-209ENST00000560519 RRAS2P62070 204 aaPredicted RBP6.78□□□□□ -1.32
HERC1-209ENST00000560519 HBG1P69891 147 aa6.78□□□□□ -1.32
HERC1-209ENST00000560519 HBG2P69892 147 aa6.78□□□□□ -1.32
HERC1-209ENST00000560519 DLK1P80370 383 aa6.78□□□□□ -1.32
HERC1-209ENST00000560519 AKR1C1Q04828 323 aa6.78□□□□□ -1.32
HERC1-209ENST00000560519 CLINT1Q14677 625 aa6.78□□□□□ -1.32
HERC1-209ENST00000560519 FCN2Q15485 313 aa6.78□□□□□ -1.32
HERC1-209ENST00000560519 LRRC37A5PQ49AS3 106 aa6.78□□□□□ -1.32
HERC1-209ENST00000560519 ACOT7LQ6ZUV0 252 aa6.78□□□□□ -1.32
HERC1-209ENST00000560519 TMEM256Q8N2U0 113 aa6.78□□□□□ -1.32
HERC1-209ENST00000560519 ZNRF2Q8NHG8 242 aa6.78□□□□□ -1.32
HERC1-209ENST00000560519 GPR82Q96P67 336 aa6.78□□□□□ -1.32
HERC1-209ENST00000560519 SLC25A31Q9H0C2 315 aa6.78□□□□□ -1.32
HERC1-209ENST00000560519 SMCO3A2RU48 225 aa6.77□□□□□ -1.33
HERC1-209ENST00000560519 FAM24AA6NFZ4 105 aa6.77□□□□□ -1.33
HERC1-209ENST00000560519 F6UB75 175 aa6.77□□□□□ -1.33
HERC1-209ENST00000560519 MPC2O95563 127 aa6.77□□□□□ -1.33
HERC1-209ENST00000560519 NUDT3O95989 172 aa6.77□□□□□ -1.33
HERC1-209ENST00000560519 GIPP09681 153 aaPredicted RBP6.77□□□□□ -1.33
HERC1-209ENST00000560519 CXCL3P19876 107 aa6.77□□□□□ -1.33
HERC1-209ENST00000560519 S100A11P31949 105 aa6.77□□□□□ -1.33
HERC1-209ENST00000560519 SULT1A1P50225 295 aa6.77□□□□□ -1.33
HERC1-209ENST00000560519 DEFB1P60022 68 aa6.77□□□□□ -1.33
HERC1-209ENST00000560519 ZNF90Q03938 601 aa6.77□□□□□ -1.33
HERC1-209ENST00000560519 FGL1Q08830 312 aa6.77□□□□□ -1.33
HERC1-209ENST00000560519 TMEM144Q7Z5S9 345 aa6.77□□□□□ -1.33
HERC1-209ENST00000560519 TMEM252Q8N6L7 170 aa6.77□□□□□ -1.33
HERC1-209ENST00000560519 OR11H7Q8NGC8 314 aa6.77□□□□□ -1.33
HERC1-209ENST00000560519 OR1B1Q8NGR6 318 aa6.77□□□□□ -1.33
HERC1-209ENST00000560519 THAP6Q8TBB0 222 aa6.77□□□□□ -1.33
HERC1-209ENST00000560519 C16orf74Q96GX8 76 aa6.77□□□□□ -1.33
HERC1-209ENST00000560519 TRGV9Q99603 122 aa6.77□□□□□ -1.33
HERC1-209ENST00000560519 C11orf1Q9H5F2 150 aa6.77□□□□□ -1.33
HERC1-209ENST00000560519 PMS2P5A8MQ11 134 aa6.76□□□□□ -1.33
HERC1-209ENST00000560519 F5H768 121 aa6.76□□□□□ -1.33
HERC1-209ENST00000560519 BOLA2-SMG1P6H3BVE0 249 aa6.76□□□□□ -1.33
HERC1-209ENST00000560519 CST7O76096 145 aa6.76□□□□□ -1.33
HERC1-209ENST00000560519 DEFB130BP0DP73 79 aa6.76□□□□□ -1.33
HERC1-209ENST00000560519 DEFB130AP0DP74 79 aa6.76□□□□□ -1.33
HERC1-209ENST00000560519 BTF3P20290 206 aaKnown RBP6.76□□□□□ -1.33
HERC1-209ENST00000560519 CNN1P51911 297 aaKnown RBP6.76□□□□□ -1.33
HERC1-209ENST00000560519 RAP2BP61225 183 aa6.76□□□□□ -1.33
HERC1-209ENST00000560519 BAXQ07812 192 aa6.76□□□□□ -1.33
HERC1-209ENST00000560519 SLC38A11Q08AI6 406 aa6.76□□□□□ -1.33
HERC1-209ENST00000560519 RAB31Q13636 194 aa6.76□□□□□ -1.33
HERC1-209ENST00000560519 ATP6V1FQ16864 119 aa6.76□□□□□ -1.33
HERC1-209ENST00000560519 SPINK13Q1W4C9 94 aa6.76□□□□□ -1.33
HERC1-209ENST00000560519 THAP8Q8NA92 274 aa6.76□□□□□ -1.33
HERC1-209ENST00000560519 NPVFQ9HCQ7 196 aa6.76□□□□□ -1.33
HERC1-209ENST00000560519 SCRT2Q9NQ03 307 aa6.76□□□□□ -1.33
HERC1-209ENST00000560519 OR5AC2Q9NZP5 309 aa6.76□□□□□ -1.33
HERC1-209ENST00000560519 IGKV1D-37A0A075B6S9 117 aa6.75□□□□□ -1.33
HERC1-209ENST00000560519 IGSF23A1L1A6 192 aa6.75□□□□□ -1.33
HERC1-209ENST00000560519 CBY3A6NI87 242 aa6.75□□□□□ -1.33
HERC1-209ENST00000560519 M0R2Z0 102 aa6.75□□□□□ -1.33
HERC1-209ENST00000560519 CCNKO75909 580 aa6.75□□□□□ -1.33
HERC1-209ENST00000560519 SELENOTP62341 195 aa6.75□□□□□ -1.33
HERC1-209ENST00000560519 TEPPQ6URK8 271 aa6.75□□□□□ -1.33
HERC1-209ENST00000560519 AMTNQ6UX39 209 aa6.75□□□□□ -1.33
HERC1-209ENST00000560519 SPATA12Q7Z6I5 190 aa6.75□□□□□ -1.33
HERC1-209ENST00000560519 S100A7AQ86SG5 101 aa6.75□□□□□ -1.33
HERC1-209ENST00000560519 BPIFCQ8NFQ6 507 aa6.75□□□□□ -1.33
HERC1-209ENST00000560519 OR10J6PQ8NGY7 276 aa6.75□□□□□ -1.33
HERC1-209ENST00000560519 TMEM147Q9BVK8 224 aa6.75□□□□□ -1.33
HERC1-209ENST00000560519 SLC25A32Q9H2D1 315 aa6.75□□□□□ -1.33
HERC1-209ENST00000560519 SLC25A22Q9H936 323 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms