RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	CIART	Q8N365	385 aa	Predicted RBP	4.54	□□□□□ -1.68
LRRC49-223	ENST00000560369	KLHDC1	Q8N7A1	406 aa		4.54	□□□□□ -1.68
LRRC49-223	ENST00000560369	OR4F17	Q8NGA8	305 aa		4.54	□□□□□ -1.68
LRRC49-223	ENST00000560369	OR1L4	Q8NGR5	311 aa		4.54	□□□□□ -1.68
LRRC49-223	ENST00000560369	C22orf15	Q8WYQ4	148 aa		4.54	□□□□□ -1.68
LRRC49-223	ENST00000560369	ZC2HC1A	Q96GY0	325 aa		4.54	□□□□□ -1.68
LRRC49-223	ENST00000560369	AJUBA	Q96IF1	538 aa		4.54	□□□□□ -1.68
LRRC49-223	ENST00000560369	FANCD2OS	Q96PS1	177 aa		4.54	□□□□□ -1.68
LRRC49-223	ENST00000560369	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.54	□□□□□ -1.68
LRRC49-223	ENST00000560369	C19orf24	Q9BVV8	132 aa		4.54	□□□□□ -1.68
LRRC49-223	ENST00000560369	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.54	□□□□□ -1.68
LRRC49-223	ENST00000560369		Q9H3A6	140 aa		4.54	□□□□□ -1.68
LRRC49-223	ENST00000560369	DPM3	Q9P2X0	92 aa		4.54	□□□□□ -1.68
LRRC49-223	ENST00000560369	EPDR1	Q9UM22	224 aa		4.54	□□□□□ -1.68
LRRC49-223	ENST00000560369	NBPF19	A0A087WUL8	3843 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	ANKRD17	O75179	2603 aa	Known RBP	4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	NCBP2L	A6PVI3	153 aa	Known RBP	4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	NBR2	O15453	112 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	EGR2	P11161	476 aa	Predicted RBP	4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	HOXB4	P17483	251 aa	Predicted RBP	4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	BPIFB3	P59826	476 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	ANKRD39	Q53RE8	183 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	SSX8	Q7RTT4	187 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	ZNF738	Q8NE65	137 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	NUP35	Q8NFH5	326 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	OR11H6	Q8NGC7	330 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	PERP	Q96FX8	193 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	URB1-AS1	Q96HZ7	61 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	ARL2-SNX15	V9GYD0	113 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	FAM208B	Q5VWN6	2430 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	TRAV9-2	A0A087WT02	112 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	hDV102S1	A0JD36	115 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369		H0Y8G0	127 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369		M0R3E3	92 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	PRTN3	P24158	256 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	UBE2G1	P62253	170 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	RPL19	P84098	196 aa	Known RBP	4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	VAMP3	Q15836	100 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	MPV17L2	Q567V2	206 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	OR4C5	Q8NGB2	326 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	OR2D3	Q8NGH3	330 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	GTSF1	Q8WW33	167 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	ZNF414	Q96IQ9	312 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	SELENOK	Q9Y6D0	94 aa		4.53	□□□□□ -1.68
LRRC49-223	ENST00000560369	CBY3	A6NI87	242 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	C2orf70	A6NJV1	201 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	TOMM40	O96008	361 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	IGLV2-11	P01706	119 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	PAX2	Q02962	417 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	FOXE3	Q13461	319 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	C5orf64	Q2M2E5	130 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	GOLT1A	Q6ZVE7	132 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	ZNF491	Q8N8L2	437 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	ITLN2	Q8WWU7	325 aa	Predicted RBP	4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	PMCHL2	Q9BQD1	86 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	MRPL27	Q9P0M9	148 aa	Known RBP	4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	HIGD1A	Q9Y241	93 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	MRPS16	Q9Y3D3	137 aa	Known RBP	4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	ABCA12	Q86UK0	2595 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	TEX15	Q9BXT5	2789 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	LRRK2	Q5S007	2527 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	DOPEY1	Q5JWR5	2465 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	HIGD1C	A8MV81	97 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	OVOL3	O00110	214 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	OR2J3	O76001	311 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	NDUFA3	O95167	84 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	TCRA	P04437	139 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	IL4	P05112	153 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	HLA-DMB	P28068	263 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	S100A7	P31151	101 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	FCGR2B	P31994	310 aa	Predicted RBP	4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	ZNF138	P52744	262 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	UCN	P55089	124 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	PRNT	Q86SH4	94 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	DTX2	Q86UW9	622 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	TIMD4	Q96H15	378 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	RASL11B	Q9BPW5	248 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	MLST8	Q9BVC4	326 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	BPESC1	Q9GZL8	116 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	SIRPD	Q9H106	197 aa		4.52	□□□□□ -1.69
LRRC49-223	ENST00000560369	IGHV2-70D	A0A0C4DH43	119 aa		4.51	□□□□□ -1.69
LRRC49-223	ENST00000560369	OR2T8	A6NH00	312 aa		4.51	□□□□□ -1.69
LRRC49-223	ENST00000560369	OR4C46	A6NHA9	309 aa		4.51	□□□□□ -1.69
LRRC49-223	ENST00000560369	PLP1	P60201	277 aa		4.51	□□□□□ -1.69
LRRC49-223	ENST00000560369	NPB	Q8NG41	125 aa		4.51	□□□□□ -1.69
LRRC49-223	ENST00000560369	PGLYRP4	Q96LB8	373 aa		4.51	□□□□□ -1.69
LRRC49-223	ENST00000560369	CHRDL1	Q9BU40	450 aa		4.51	□□□□□ -1.69
LRRC49-223	ENST00000560369	PRORY	Q9H606	182 aa		4.51	□□□□□ -1.69
LRRC49-223	ENST00000560369	KLF12	Q9Y4X4	402 aa		4.51	□□□□□ -1.69
LRRC49-223	ENST00000560369	ZNF462	Q96JM2	2506 aa		4.51	□□□□□ -1.69
LRRC49-223	ENST00000560369	IGLV11-55	A0A075B6I3	123 aa		4.51	□□□□□ -1.69
LRRC49-223	ENST00000560369	IGHV7-81	A0A0B4J1V7	117 aa		4.51	□□□□□ -1.69
LRRC49-223	ENST00000560369	MUC21	A0A0G2JKD1	596 aa		4.51	□□□□□ -1.69
LRRC49-223	ENST00000560369	MUC21	A0A140T8X8	626 aa		4.51	□□□□□ -1.69
LRRC49-223	ENST00000560369		G3V318	75 aa		4.51	□□□□□ -1.69
LRRC49-223	ENST00000560369		K7EP13	123 aa		4.51	□□□□□ -1.69
LRRC49-223	ENST00000560369	MRPS12	O15235	138 aa	Known RBP	4.51	□□□□□ -1.69
LRRC49-223	ENST00000560369	SNAI2	O43623	268 aa		4.51	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms