RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 TREM1Q9NP99 234 aa9.25□□□□□ -0.93
HERC1-205ENST00000559886 C11orf94C9JXX5 98 aa9.24□□□□□ -0.93
HERC1-205ENST00000559886 NDUFB4O95168 129 aa9.24□□□□□ -0.93
HERC1-205ENST00000559886 FOLR2P14207 255 aa9.24□□□□□ -0.93
HERC1-205ENST00000559886 ATF4P18848 351 aaPredicted RBP9.24□□□□□ -0.93
HERC1-205ENST00000559886 ATP5G3P48201 142 aa9.24□□□□□ -0.93
HERC1-205ENST00000559886 PDE6HQ13956 83 aa9.24□□□□□ -0.93
HERC1-205ENST00000559886 NKX6-2Q9C056 277 aaPredicted RBP9.24□□□□□ -0.93
HERC1-205ENST00000559886 GGTLC3B5MD39 225 aa9.24□□□□□ -0.93
HERC1-205ENST00000559886 NDUFS6O75380 124 aaKnown RBP9.24□□□□□ -0.93
HERC1-205ENST00000559886 RANP62826 216 aaKnown RBP9.24□□□□□ -0.93
HERC1-205ENST00000559886 ADAMTSL5Q6ZMM2 481 aa9.24□□□□□ -0.93
HERC1-205ENST00000559886 CCDC28AQ8IWP9 274 aa9.24□□□□□ -0.93
HERC1-205ENST00000559886 ZNF785A8K8V0 405 aa9.23□□□□□ -0.93
HERC1-205ENST00000559886 HELTA6NFD8 242 aa9.23□□□□□ -0.93
HERC1-205ENST00000559886 SLC17A3O00476 420 aa9.23□□□□□ -0.93
HERC1-205ENST00000559886 OVOL1O14753 267 aa9.23□□□□□ -0.93
HERC1-205ENST00000559886 ZNF253O75346 499 aa9.23□□□□□ -0.93
HERC1-205ENST00000559886 CSN3P07498 182 aa9.23□□□□□ -0.93
HERC1-205ENST00000559886 SRP19P09132 144 aaKnown RBP9.23□□□□□ -0.93
HERC1-205ENST00000559886 MEOX2P50222 304 aa9.23□□□□□ -0.93
HERC1-205ENST00000559886 SUMO1P63165 101 aaKnown RBP9.23□□□□□ -0.93
HERC1-205ENST00000559886 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.23□□□□□ -0.93
HERC1-205ENST00000559886 LYPD1Q8N2G4 141 aa9.23□□□□□ -0.93
HERC1-205ENST00000559886 TMEM158Q8WZ71 300 aa9.23□□□□□ -0.93
HERC1-205ENST00000559886 M0QZ24 198 aa9.22□□□□□ -0.93
HERC1-205ENST00000559886 ATP6V1G1O75348 118 aa9.22□□□□□ -0.93
HERC1-205ENST00000559886 FAM90A2PQ658T7 463 aa9.22□□□□□ -0.93
HERC1-205ENST00000559886 SLC35B3Q9H1N7 401 aa9.22□□□□□ -0.93
HERC1-205ENST00000559886 Q9H3A6 140 aa9.22□□□□□ -0.93
HERC1-205ENST00000559886 PDE6DO43924 150 aa9.22□□□□□ -0.93
HERC1-205ENST00000559886 TCF24Q7RTU0 167 aa9.22□□□□□ -0.93
HERC1-205ENST00000559886 ZNF747Q9BV97 191 aa9.22□□□□□ -0.93
HERC1-205ENST00000559886 OTORQ9NRC9 128 aa9.22□□□□□ -0.93
HERC1-205ENST00000559886 MLXQ9UH92 298 aa9.22□□□□□ -0.93
HERC1-205ENST00000559886 TMEM218A2RU14 115 aa9.21□□□□□ -0.93
HERC1-205ENST00000559886 PGPA6NDG6 321 aa9.21□□□□□ -0.93
HERC1-205ENST00000559886 TMEM250H0YL14 139 aa9.21□□□□□ -0.93
HERC1-205ENST00000559886 PSG9Q00887 426 aa9.21□□□□□ -0.93
HERC1-205ENST00000559886 ZNF331Q9NQX6 463 aaPredicted RBP9.21□□□□□ -0.93
HERC1-205ENST00000559886 SIGLEC8Q9NYZ4 499 aa9.21□□□□□ -0.93
HERC1-205ENST00000559886 F6UZH7 168 aa9.21□□□□□ -0.94
HERC1-205ENST00000559886 SFTA3P0C7M3 94 aa9.21□□□□□ -0.94
HERC1-205ENST00000559886 EXOC3-AS1Q8N2X6 119 aa9.21□□□□□ -0.94
HERC1-205ENST00000559886 CYB561D1Q8N8Q1 229 aa9.21□□□□□ -0.94
HERC1-205ENST00000559886 PF4P02776 101 aa9.2□□□□□ -0.94
HERC1-205ENST00000559886 RPL11P62913 178 aaKnown RBP9.2□□□□□ -0.94
HERC1-205ENST00000559886 TCEAL7Q9BRU2 100 aa9.2□□□□□ -0.94
HERC1-205ENST00000559886 SLC50A1Q9BRV3 221 aa9.2□□□□□ -0.94
HERC1-205ENST00000559886 NRN1Q9NPD7 142 aa9.2□□□□□ -0.94
HERC1-205ENST00000559886 SELENOKQ9Y6D0 94 aa9.2□□□□□ -0.94
HERC1-205ENST00000559886 SCO2A0A1W2PP80 73 aa9.2□□□□□ -0.94
HERC1-205ENST00000559886 LINC00482Q8N8I6 264 aa9.2□□□□□ -0.94
HERC1-205ENST00000559886 C5orf17Q8NAS9 161 aa9.2□□□□□ -0.94
HERC1-205ENST00000559886 C11orf52Q96A22 123 aa9.2□□□□□ -0.94
HERC1-205ENST00000559886 AAMDCQ9H7C9 122 aa9.2□□□□□ -0.94
HERC1-205ENST00000559886 SLC25A5P05141 298 aaKnown RBP9.19□□□□□ -0.94
HERC1-205ENST00000559886 EPDR1Q9UM22 224 aa9.19□□□□□ -0.94
HERC1-205ENST00000559886 KRBOX1C9JBD0 128 aa9.19□□□□□ -0.94
HERC1-205ENST00000559886 SOCS3O14543 225 aa9.19□□□□□ -0.94
HERC1-205ENST00000559886 C3orf56Q8N813 242 aa9.19□□□□□ -0.94
HERC1-205ENST00000559886 LINC00052Q96N35 136 aa9.19□□□□□ -0.94
HERC1-205ENST00000559886 COL6A5A8TX70 2615 aa9.18□□□□□ -0.94
HERC1-205ENST00000559886 STAB1Q9NY15 2570 aa9.18□□□□□ -0.94
HERC1-205ENST00000559886 IGKV3-7A0A075B6H7 116 aa9.18□□□□□ -0.94
HERC1-205ENST00000559886 TRAV8-2A0A0B4J237 113 aa9.18□□□□□ -0.94
HERC1-205ENST00000559886 ADCYAP1P18509 176 aa9.18□□□□□ -0.94
HERC1-205ENST00000559886 CEBPGP53567 150 aa9.18□□□□□ -0.94
HERC1-205ENST00000559886 DEFB114Q30KQ6 69 aa9.18□□□□□ -0.94
HERC1-205ENST00000559886 SOHLH1Q5JUK2 328 aa9.18□□□□□ -0.94
HERC1-205ENST00000559886 IGFL4Q6B9Z1 124 aa9.18□□□□□ -0.94
HERC1-205ENST00000559886 C12orf54Q6X4T0 127 aa9.18□□□□□ -0.94
HERC1-205ENST00000559886 DYNLRB2Q8TF09 96 aa9.18□□□□□ -0.94
HERC1-205ENST00000559886 DCANP1Q8TF63 244 aa9.18□□□□□ -0.94
HERC1-205ENST00000559886 HIST1H2BAQ96A08 127 aa9.18□□□□□ -0.94
HERC1-205ENST00000559886 M0R3E3 92 aa9.17□□□□□ -0.94
HERC1-205ENST00000559886 C10orf91Q5T1B1 145 aa9.17□□□□□ -0.94
HERC1-205ENST00000559886 SAMD13Q5VXD3 122 aa9.17□□□□□ -0.94
HERC1-205ENST00000559886 ARL6IP6Q8N6S5 226 aa9.17□□□□□ -0.94
HERC1-205ENST00000559886 CMTM2Q8TAZ6 248 aa9.17□□□□□ -0.94
HERC1-205ENST00000559886 C2CD4CQ8TF44 421 aa9.17□□□□□ -0.94
HERC1-205ENST00000559886 C16orf92Q96LL3 132 aa9.17□□□□□ -0.94
HERC1-205ENST00000559886 SEC11CQ9BY50 192 aa9.17□□□□□ -0.94
HERC1-205ENST00000559886 MS4A6AQ9H2W1 248 aa9.17□□□□□ -0.94
HERC1-205ENST00000559886 CLEC5AQ9NY25 188 aa9.17□□□□□ -0.94
HERC1-205ENST00000559886 VWFP04275 2813 aa9.17□□□□□ -0.94
HERC1-205ENST00000559886 F8W036 122 aa9.17□□□□□ -0.94
HERC1-205ENST00000559886 PEX7O00628 323 aa9.17□□□□□ -0.94
HERC1-205ENST00000559886 ISLRO14498 428 aa9.17□□□□□ -0.94
HERC1-205ENST00000559886 HLA-DMBP28068 263 aa9.17□□□□□ -0.94
HERC1-205ENST00000559886 GNG5P63218 68 aa9.17□□□□□ -0.94
HERC1-205ENST00000559886 SHISA2Q6UWI4 295 aa9.17□□□□□ -0.94
HERC1-205ENST00000559886 GBGT1Q8N5D6 347 aa9.17□□□□□ -0.94
HERC1-205ENST00000559886 RPUSD4Q96CM3 377 aaKnown RBP9.17□□□□□ -0.94
HERC1-205ENST00000559886 PRELID1Q9Y255 219 aa9.17□□□□□ -0.94
HERC1-205ENST00000559886 TCRAP04437 139 aa9.16□□□□□ -0.94
HERC1-205ENST00000559886 TMEM61Q8N0U2 210 aa9.16□□□□□ -0.94
HERC1-205ENST00000559886 RNF182Q8N6D2 247 aa9.16□□□□□ -0.94
HERC1-205ENST00000559886 ATG101Q9BSB4 218 aa9.16□□□□□ -0.94
HERC1-205ENST00000559886 DERL1Q9BUN8 251 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms