RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 SLC38A11Q08AI6 406 aa8.7□□□□□ -1.02
SPG11-219ENST00000559822 RAB31Q13636 194 aa8.7□□□□□ -1.02
SPG11-219ENST00000559822 SOHLH1Q5JUK2 328 aa8.7□□□□□ -1.02
SPG11-219ENST00000559822 TMEM88Q6PEY1 159 aa8.7□□□□□ -1.02
SPG11-219ENST00000559822 BPIFA4PQ86YQ2 179 aa8.7□□□□□ -1.02
SPG11-219ENST00000559822 BAP18Q8IXM2 172 aa8.7□□□□□ -1.02
SPG11-219ENST00000559822 SLC50A1Q9BRV3 221 aa8.7□□□□□ -1.02
SPG11-219ENST00000559822 PLA2G2EQ9NZK7 142 aa8.7□□□□□ -1.02
SPG11-219ENST00000559822 DNAH6Q9C0G6 4158 aa8.7□□□□□ -1.02
SPG11-219ENST00000559822 ZNF705GA8MUZ8 300 aaPredicted RBP8.69□□□□□ -1.02
SPG11-219ENST00000559822 AGPAT2O15120 278 aa8.69□□□□□ -1.02
SPG11-219ENST00000559822 COX7A2P2O60397 106 aa8.69□□□□□ -1.02
SPG11-219ENST00000559822 FAM3BP58499 235 aaPredicted RBP8.69□□□□□ -1.02
SPG11-219ENST00000559822 TAS2R60P59551 318 aa8.69□□□□□ -1.02
SPG11-219ENST00000559822 LINC00305Q7Z4B0 112 aa8.69□□□□□ -1.02
SPG11-219ENST00000559822 RPUSD4Q96CM3 377 aaKnown RBP8.69□□□□□ -1.02
SPG11-219ENST00000559822 LINC01587Q99440 93 aa8.69□□□□□ -1.02
SPG11-219ENST00000559822 SDHCQ99643 169 aaPredicted RBP8.69□□□□□ -1.02
SPG11-219ENST00000559822 C20orf85Q9H1P6 137 aa8.69□□□□□ -1.02
SPG11-219ENST00000559822 RCL1Q9Y2P8 373 aaKnown RBP8.69□□□□□ -1.02
SPG11-219ENST00000559822 HECTD4Q9Y4D8 3996 aa8.69□□□□□ -1.02
SPG11-219ENST00000559822 TRAV12-2A0A075B6T6 113 aa8.68□□□□□ -1.02
SPG11-219ENST00000559822 C7orf66A4D0T2 115 aa8.68□□□□□ -1.02
SPG11-219ENST00000559822 MBPP02686 304 aaPredicted RBP8.68□□□□□ -1.02
SPG11-219ENST00000559822 CDKN1BP46527 198 aa8.68□□□□□ -1.02
SPG11-219ENST00000559822 PATE2Q6UY27 113 aa8.68□□□□□ -1.02
SPG11-219ENST00000559822 ZNF493Q6ZR52 646 aa8.68□□□□□ -1.02
SPG11-219ENST00000559822 C16orf74Q96GX8 76 aa8.68□□□□□ -1.02
SPG11-219ENST00000559822 ATG101Q9BSB4 218 aa8.68□□□□□ -1.02
SPG11-219ENST00000559822 ZNF331Q9NQX6 463 aaPredicted RBP8.68□□□□□ -1.02
SPG11-219ENST00000559822 IGLV2-18A0A075B6J9 118 aa8.67□□□□□ -1.02
SPG11-219ENST00000559822 A0A1B0GVY2 172 aa8.67□□□□□ -1.02
SPG11-219ENST00000559822 MRPS12O15235 138 aaKnown RBP8.67□□□□□ -1.02
SPG11-219ENST00000559822 RTL8CO15255 209 aa8.67□□□□□ -1.02
SPG11-219ENST00000559822 LYRM1O43325 122 aa8.67□□□□□ -1.02
SPG11-219ENST00000559822 ATP5G1P05496 136 aa8.67□□□□□ -1.02
SPG11-219ENST00000559822 DEFB130BP0DP73 79 aa8.67□□□□□ -1.02
SPG11-219ENST00000559822 DEFB130AP0DP74 79 aa8.67□□□□□ -1.02
SPG11-219ENST00000559822 PVALBP20472 110 aaPredicted RBP8.67□□□□□ -1.02
SPG11-219ENST00000559822 ATP5G3P48201 142 aa8.67□□□□□ -1.02
SPG11-219ENST00000559822 BCAP31P51572 246 aa8.67□□□□□ -1.02
SPG11-219ENST00000559822 C10orf113Q5VZT2 155 aa8.67□□□□□ -1.02
SPG11-219ENST00000559822 Q6ZRG5 221 aa8.67□□□□□ -1.02
SPG11-219ENST00000559822 C20orf144Q9BQM9 153 aa8.67□□□□□ -1.02
SPG11-219ENST00000559822 NDUFA13Q9P0J0 144 aa8.67□□□□□ -1.02
SPG11-219ENST00000559822 PXMP4Q9Y6I8 212 aa8.67□□□□□ -1.02
SPG11-219ENST00000559822 C5orf51A6NDU8 294 aa8.66□□□□□ -1.02
SPG11-219ENST00000559822 CBY3A6NI87 242 aa8.66□□□□□ -1.02
SPG11-219ENST00000559822 FAM25EA8MYX2 175 aa8.66□□□□□ -1.02
SPG11-219ENST00000559822 H7BYZ3 331 aa8.66□□□□□ -1.02
SPG11-219ENST00000559822 HTN1P15515 57 aa8.66□□□□□ -1.02
SPG11-219ENST00000559822 CAMLGP49069 296 aa8.66□□□□□ -1.02
SPG11-219ENST00000559822 CAV2P51636 162 aa8.66□□□□□ -1.02
SPG11-219ENST00000559822 ARL16Q0P5N6 197 aa8.66□□□□□ -1.02
SPG11-219ENST00000559822 GUK1Q16774 197 aa8.66□□□□□ -1.02
SPG11-219ENST00000559822 Q6ZR54 194 aa8.66□□□□□ -1.02
SPG11-219ENST00000559822 OR1L4Q8NGR5 311 aa8.66□□□□□ -1.02
SPG11-219ENST00000559822 OR10J6PQ8NGY7 276 aa8.66□□□□□ -1.02
SPG11-219ENST00000559822 PFDN5Q99471 154 aa8.66□□□□□ -1.02
SPG11-219ENST00000559822 MGST2Q99735 147 aa8.66□□□□□ -1.02
SPG11-219ENST00000559822 LSM5Q9Y4Y9 91 aaKnown RBP8.66□□□□□ -1.02
SPG11-219ENST00000559822 TIMM8BQ9Y5J9 83 aaPredicted RBP8.66□□□□□ -1.02
SPG11-219ENST00000559822 F5H768 121 aa8.65□□□□□ -1.02
SPG11-219ENST00000559822 CCSO14618 274 aa8.65□□□□□ -1.02
SPG11-219ENST00000559822 TCRBP04435 133 aa8.65□□□□□ -1.02
SPG11-219ENST00000559822 PRM2P04554 102 aa8.65□□□□□ -1.02
SPG11-219ENST00000559822 ZNF431Q8TF32 576 aaPredicted RBP8.65□□□□□ -1.02
SPG11-219ENST00000559822 TMEM263Q8WUH6 116 aaKnown RBP8.65□□□□□ -1.02
SPG11-219ENST00000559822 DNAJC4Q9NNZ3 241 aa8.65□□□□□ -1.02
SPG11-219ENST00000559822 UQCC1Q9NVA1 299 aa8.65□□□□□ -1.02
SPG11-219ENST00000559822 TRAV6A0A075B6T7 132 aa8.64□□□□□ -1.03
SPG11-219ENST00000559822 PLAC8L1A1L4L8 177 aa8.64□□□□□ -1.03
SPG11-219ENST00000559822 PLA2G10O15496 165 aa8.64□□□□□ -1.03
SPG11-219ENST00000559822 MED14OSP0DP75 135 aa8.64□□□□□ -1.03
SPG11-219ENST00000559822 AZU1P20160 251 aa8.64□□□□□ -1.03
SPG11-219ENST00000559822 HBG1P69891 147 aa8.64□□□□□ -1.03
SPG11-219ENST00000559822 HBG2P69892 147 aa8.64□□□□□ -1.03
SPG11-219ENST00000559822 OPCMLQ14982 345 aa8.64□□□□□ -1.03
SPG11-219ENST00000559822 C1orf134Q5TEV5 83 aa8.64□□□□□ -1.03
SPG11-219ENST00000559822 NRARPQ7Z6K4 114 aa8.64□□□□□ -1.03
SPG11-219ENST00000559822 STX12Q86Y82 276 aa8.64□□□□□ -1.03
SPG11-219ENST00000559822 CCDC28AQ8IWP9 274 aa8.64□□□□□ -1.03
SPG11-219ENST00000559822 C12orf45Q8N5I9 185 aaPredicted RBP8.64□□□□□ -1.03
SPG11-219ENST00000559822 TMEM37Q8WXS4 190 aa8.64□□□□□ -1.03
SPG11-219ENST00000559822 C2orf50Q96LR7 162 aa8.64□□□□□ -1.03
SPG11-219ENST00000559822 CCDC32Q9BV29 185 aa8.64□□□□□ -1.03
SPG11-219ENST00000559822 NUDT15Q9NV35 164 aa8.64□□□□□ -1.03
SPG11-219ENST00000559822 ZNF253O75346 499 aa8.63□□□□□ -1.03
SPG11-219ENST00000559822 CST7O76096 145 aa8.63□□□□□ -1.03
SPG11-219ENST00000559822 NUDT3O95989 172 aa8.63□□□□□ -1.03
SPG11-219ENST00000559822 IGLC2P0DOY2 106 aa8.63□□□□□ -1.03
SPG11-219ENST00000559822 S100A11P31949 105 aa8.63□□□□□ -1.03
SPG11-219ENST00000559822 SULT1A1P50225 295 aa8.63□□□□□ -1.03
SPG11-219ENST00000559822 CCL18P55774 89 aa8.63□□□□□ -1.03
SPG11-219ENST00000559822 RNASE8Q8TDE3 154 aaKnown RBP8.63□□□□□ -1.03
SPG11-219ENST00000559822 NACAE9PAV3 2078 aa8.62□□□□□ -1.03
SPG11-219ENST00000559822 SLC17A3O00476 420 aa8.62□□□□□ -1.03
SPG11-219ENST00000559822 SNRPCP09234 159 aaKnown RBP8.62□□□□□ -1.03
SPG11-219ENST00000559822 H2AFB2P0C5Z0 115 aa8.62□□□□□ -1.03
SPG11-219ENST00000559822 LEPP41159 167 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms