RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 OR2G3Q8NGZ4 309 aa4.22□□□□□ -1.73
USP3-215ENST00000559771 RNASE11Q8TAA1 199 aaKnown RBP4.22□□□□□ -1.73
USP3-215ENST00000559771 SCGB1C1Q8TD33 95 aa4.22□□□□□ -1.73
USP3-215ENST00000559771 GPR146Q96CH1 333 aa4.22□□□□□ -1.73
USP3-215ENST00000559771 C20orf24Q9BUV8 137 aa4.22□□□□□ -1.73
USP3-215ENST00000559771 RHPN1-AS1Q9BWJ2 59 aa4.22□□□□□ -1.73
USP3-215ENST00000559771 SMIM3Q9BZL3 60 aa4.22□□□□□ -1.73
USP3-215ENST00000559771 CSTL1Q9H114 145 aa4.22□□□□□ -1.73
USP3-215ENST00000559771 C11orf68Q9H3H3 251 aaKnown RBP4.22□□□□□ -1.73
USP3-215ENST00000559771 WFDC1Q9HC57 220 aa4.22□□□□□ -1.73
USP3-215ENST00000559771 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.22□□□□□ -1.73
USP3-215ENST00000559771 TMEM14BQ9NUH8 114 aa4.22□□□□□ -1.73
USP3-215ENST00000559771 KLK5Q9Y337 293 aaPredicted RBP4.22□□□□□ -1.73
USP3-215ENST00000559771 TIMM9Q9Y5J7 89 aa4.22□□□□□ -1.73
USP3-215ENST00000559771 OR51B2Q9Y5P1 312 aa4.22□□□□□ -1.73
USP3-215ENST00000559771 IGHV3OR16-13A0A075B7E8 117 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 IGHV3-74A0A0B4J1X5 117 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 IGSF23A1L1A6 192 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 FAM24AA6NFZ4 105 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 C15orf61A6NNL5 157 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 B4DEV8 164 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 DEFB4AO15263 64 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 P0C879 139 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 ADCYAP1P18509 176 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 ATP6V0CP27449 155 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 TFPI2P48307 235 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 PAX9P55771 341 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 ATP5IP56385 69 aaPredicted RBP4.21□□□□□ -1.74
USP3-215ENST00000559771 Q56UQ5 140 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 KHDC3LQ587J8 217 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 PVRIGQ6DKI7 326 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 ATRAIDQ6UW56 229 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 C15orf54Q8N8G6 183 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 Q8NAQ8 132 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 ZNF114Q8NC26 417 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 TMEM116Q8NCL8 245 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 OR1P1Q8NH06 330 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 OR11H2Q8NH07 326 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 OR52E5Q8NH55 327 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 GATAD1Q8WUU5 269 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 MBD3L1Q8WWY6 194 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 RARRES2Q99969 163 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 GGACTQ9BVM4 153 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 SCRT1Q9BWW7 348 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 HINT2Q9BX68 163 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 EIF5A2Q9GZV4 153 aaKnown RBP4.21□□□□□ -1.74
USP3-215ENST00000559771 VSIRQ9H7M9 311 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 MRPL36Q9P0J6 103 aaKnown RBP4.21□□□□□ -1.74
USP3-215ENST00000559771 HSPB7Q9UBY9 170 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 CACNG5Q9UF02 275 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 APLNQ9ULZ1 77 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 PRELID1Q9Y255 219 aa4.21□□□□□ -1.74
USP3-215ENST00000559771 IGKV3-7A0A075B6H7 116 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 A0A087WWC5 75 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 RBFOX3A6NFN3 312 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 NUPL2O15504 423 aaKnown RBP4.2□□□□□ -1.74
USP3-215ENST00000559771 TMEM50AO95807 157 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 MT-CO2P00403 227 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 IFNA1P01562 189 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 IGKV1-5P01602 117 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 MT-ND4LP03901 98 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 RBMY1A1P0DJD3 496 aaKnown RBP4.2□□□□□ -1.74
USP3-215ENST00000559771 RBMY1CP0DJD4 496 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 ERVK-16P61578 105 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 PRCDQ00LT1 54 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 PNRC1Q12796 327 aaPredicted RBP4.2□□□□□ -1.74
USP3-215ENST00000559771 CLINT1Q14677 625 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 RBMY1FQ15415 496 aaKnown RBP4.2□□□□□ -1.74
USP3-215ENST00000559771 IZUMO4Q1ZYL8 232 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 SOHLH1Q5JUK2 328 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 ZNF506Q5JVG8 444 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 TOMM20LQ6UXN7 152 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 TMEM14EPQ6UXP3 125 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 GBGT1Q8N5D6 347 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 TMEM217Q8N7C4 229 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.2□□□□□ -1.74
USP3-215ENST00000559771 HSD17B11Q8NBQ5 300 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 C11orf45Q8TAV5 145 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 FAM213BQ8TBF2 198 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 KRTAP4-4Q9BYR3 166 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 MS4A6AQ9H2W1 248 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 TMEM242Q9NWH2 141 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 PSENENQ9NZ42 101 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 PRNDQ9UKY0 176 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 AGRNO00468 2067 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 RYR1P21817 5038 aa4.2□□□□□ -1.74
USP3-215ENST00000559771 DYNC1H1Q14204 4646 aaKnown RBP4.2□□□□□ -1.74
USP3-215ENST00000559771 ABCA13Q86UQ4 5058 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 IGHV3-66A0A0C4DH42 116 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 A0A1B0GVY2 172 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 FAM74A7A6NL05 159 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 CYB5BO43169 146 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 MPDU1O75352 247 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 CST7O76096 145 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 YIF1AO95070 293 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 CA1P00915 261 aaPredicted RBP4.19□□□□□ -1.74
USP3-215ENST00000559771 PPT1P50897 306 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 MFAP4P55083 255 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 DEFB131AP59861 70 aa4.19□□□□□ -1.74
USP3-215ENST00000559771 HSPE1P61604 102 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms