RNA–Protein interactions for RNA: ENST00000559602.5

ETFA-208, Transcript of electron transfer flavoprotein subunit alpha, human

TSL 3 BASIC

Gene ETFA, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ETFA-208	ENST00000559602	ZNF253	O75346	499 aa		12.53	□□□□□ -0.4
ETFA-208	ENST00000559602	DEFB1	P60022	68 aa		12.53	□□□□□ -0.4
ETFA-208	ENST00000559602	OXA1L	Q15070	435 aa		12.53	□□□□□ -0.4
ETFA-208	ENST00000559602	FCN2	Q15485	313 aa		12.53	□□□□□ -0.4
ETFA-208	ENST00000559602	FAM78B	Q5VT40	261 aa		12.53	□□□□□ -0.4
ETFA-208	ENST00000559602	ZFAND6	Q6FIF0	208 aa		12.53	□□□□□ -0.4
ETFA-208	ENST00000559602	ZNF331	Q9NQX6	463 aa	Predicted RBP	12.53	□□□□□ -0.4
ETFA-208	ENST00000559602	DUSP14	O95147	198 aa	Known RBP	12.52	□□□□□ -0.41
ETFA-208	ENST00000559602	GIP	P09681	153 aa	Predicted RBP	12.52	□□□□□ -0.41
ETFA-208	ENST00000559602	PSG9	Q00887	426 aa		12.52	□□□□□ -0.41
ETFA-208	ENST00000559602	FGL1	Q08830	312 aa		12.52	□□□□□ -0.41
ETFA-208	ENST00000559602	TMEM14C	Q9P0S9	112 aa		12.52	□□□□□ -0.41
ETFA-208	ENST00000559602		X6R8D5	127 aa		12.52	□□□□□ -0.41
ETFA-208	ENST00000559602	C17orf112	F2Z3M2	114 aa		12.51	□□□□□ -0.41
ETFA-208	ENST00000559602		F6UB75	175 aa		12.51	□□□□□ -0.41
ETFA-208	ENST00000559602	PSG3	Q16557	428 aa		12.51	□□□□□ -0.41
ETFA-208	ENST00000559602	AMTN	Q6UX39	209 aa		12.51	□□□□□ -0.41
ETFA-208	ENST00000559602	ZNF705A	Q6ZN79	300 aa	Predicted RBP	12.51	□□□□□ -0.41
ETFA-208	ENST00000559602	RNF182	Q8N6D2	247 aa		12.51	□□□□□ -0.41
ETFA-208	ENST00000559602	ZNF738	Q8NE65	137 aa		12.51	□□□□□ -0.41
ETFA-208	ENST00000559602	OR4B1	Q8NGF8	309 aa		12.51	□□□□□ -0.41
ETFA-208	ENST00000559602	LRRC20	Q8TCA0	184 aa		12.51	□□□□□ -0.41
ETFA-208	ENST00000559602	NEU1	Q99519	415 aa		12.51	□□□□□ -0.41
ETFA-208	ENST00000559602	XCL2	Q9UBD3	114 aa		12.51	□□□□□ -0.41
ETFA-208	ENST00000559602	ZNF705F	A8MVS1	300 aa	Predicted RBP	12.5	□□□□□ -0.41
ETFA-208	ENST00000559602	AMBP	P02760	352 aa		12.5	□□□□□ -0.41
ETFA-208	ENST00000559602	ZNF705D	P0CH99	300 aa	Predicted RBP	12.5	□□□□□ -0.41
ETFA-208	ENST00000559602	ZNF705B	P0CI00	300 aa	Predicted RBP	12.5	□□□□□ -0.41
ETFA-208	ENST00000559602	PDE6H	Q13956	83 aa		12.5	□□□□□ -0.41
ETFA-208	ENST00000559602	SAT2	Q96F10	170 aa	Predicted RBP	12.5	□□□□□ -0.41
ETFA-208	ENST00000559602	MRPL32	Q9BYC8	188 aa	Known RBP	12.5	□□□□□ -0.41
ETFA-208	ENST00000559602	MFF	Q9GZY8	342 aa		12.5	□□□□□ -0.41
ETFA-208	ENST00000559602	TENM2	Q9NT68	2774 aa		12.5	□□□□□ -0.41
ETFA-208	ENST00000559602	NUPR2	A6NF83	97 aa		12.49	□□□□□ -0.41
ETFA-208	ENST00000559602		H3BQ15	152 aa		12.49	□□□□□ -0.41
ETFA-208	ENST00000559602	IFNA5	P01569	189 aa		12.49	□□□□□ -0.41
ETFA-208	ENST00000559602	IGKV3-20	P01619	116 aa		12.49	□□□□□ -0.41
ETFA-208	ENST00000559602	CNN1	P51911	297 aa	Known RBP	12.49	□□□□□ -0.41
ETFA-208	ENST00000559602	IGFL4	Q6B9Z1	124 aa		12.49	□□□□□ -0.41
ETFA-208	ENST00000559602	OR8A1	Q8NGG7	326 aa		12.49	□□□□□ -0.41
ETFA-208	ENST00000559602	AQP10	Q96PS8	301 aa		12.49	□□□□□ -0.41
ETFA-208	ENST00000559602	SLC35B3	Q9H1N7	401 aa		12.49	□□□□□ -0.41
ETFA-208	ENST00000559602	IGHV4-28	A0A0C4DH34	117 aa		12.48	□□□□□ -0.41
ETFA-208	ENST00000559602	SMIM9	A6NGZ8	99 aa		12.48	□□□□□ -0.41
ETFA-208	ENST00000559602	SLC17A3	O00476	420 aa		12.48	□□□□□ -0.41
ETFA-208	ENST00000559602	GCSAML	Q5JQS6	135 aa		12.48	□□□□□ -0.41
ETFA-208	ENST00000559602	MRPL53	Q96EL3	112 aa	Known RBP	12.48	□□□□□ -0.41
ETFA-208	ENST00000559602	TRBV19	A0A075B6N1	114 aa		12.47	□□□□□ -0.41
ETFA-208	ENST00000559602	TRAV5	A0A0B4J249	113 aa		12.47	□□□□□ -0.41
ETFA-208	ENST00000559602	RBMY1A1	P0DJD3	496 aa	Known RBP	12.47	□□□□□ -0.41
ETFA-208	ENST00000559602	RBMY1C	P0DJD4	496 aa		12.47	□□□□□ -0.41
ETFA-208	ENST00000559602	HIST1H1E	P10412	219 aa	Known RBP	12.47	□□□□□ -0.41
ETFA-208	ENST00000559602	HLA-DMB	P28068	263 aa		12.47	□□□□□ -0.41
ETFA-208	ENST00000559602	RBMY1F	Q15415	496 aa	Known RBP	12.47	□□□□□ -0.41
ETFA-208	ENST00000559602	SCGB1C1	Q8TD33	95 aa		12.47	□□□□□ -0.41
ETFA-208	ENST00000559602	RPUSD4	Q96CM3	377 aa	Known RBP	12.47	□□□□□ -0.41
ETFA-208	ENST00000559602	FAM167A-AS1	Q96KT0	104 aa		12.47	□□□□□ -0.41
ETFA-208	ENST00000559602	ZNF586	Q9NXT0	402 aa		12.47	□□□□□ -0.41
ETFA-208	ENST00000559602	CXorf65	A6NEN9	183 aa		12.46	□□□□□ -0.41
ETFA-208	ENST00000559602	ZNF266	Q14584	549 aa		12.46	□□□□□ -0.41
ETFA-208	ENST00000559602	C11orf45	Q8TAV5	145 aa		12.46	□□□□□ -0.41
ETFA-208	ENST00000559602	IGF2BP2-AS1	Q96M15	143 aa		12.46	□□□□□ -0.41
ETFA-208	ENST00000559602	SLC25A2	Q9BXI2	301 aa		12.46	□□□□□ -0.41
ETFA-208	ENST00000559602	SMIM3	Q9BZL3	60 aa		12.46	□□□□□ -0.41
ETFA-208	ENST00000559602	GOLT1B	Q9Y3E0	138 aa		12.46	□□□□□ -0.41
ETFA-208	ENST00000559602	TIMM9	Q9Y5J7	89 aa		12.46	□□□□□ -0.41
ETFA-208	ENST00000559602	TMEM189	A5PLL7	270 aa		12.45	□□□□□ -0.42
ETFA-208	ENST00000559602	BOLA2-SMG1P6	H3BVE0	249 aa		12.45	□□□□□ -0.42
ETFA-208	ENST00000559602	WFDC1	Q9HC57	220 aa		12.45	□□□□□ -0.42
ETFA-208	ENST00000559602	FUT9	Q9Y231	359 aa		12.45	□□□□□ -0.42
ETFA-208	ENST00000559602	PRELID1	Q9Y255	219 aa		12.45	□□□□□ -0.42
ETFA-208	ENST00000559602	LCE6A	A0A183	80 aa		12.44	□□□□□ -0.42
ETFA-208	ENST00000559602	FXYD7	P58549	80 aa		12.44	□□□□□ -0.42
ETFA-208	ENST00000559602	HIST1H1A	Q02539	215 aa	Predicted RBP	12.44	□□□□□ -0.42
ETFA-208	ENST00000559602	FFAR4	Q5NUL3	377 aa		12.44	□□□□□ -0.42
ETFA-208	ENST00000559602	CEMP1	Q6PRD7	247 aa	Predicted RBP	12.44	□□□□□ -0.42
ETFA-208	ENST00000559602	MIR17HG	Q75NE6	70 aa		12.44	□□□□□ -0.42
ETFA-208	ENST00000559602	LYST	Q99698	3801 aa		12.44	□□□□□ -0.42
ETFA-208	ENST00000559602	DEFB4A	O15263	64 aa		12.43	□□□□□ -0.42
ETFA-208	ENST00000559602	CRX	O43186	299 aa	Predicted RBP	12.43	□□□□□ -0.42
ETFA-208	ENST00000559602	NDUFB4	O95168	129 aa		12.43	□□□□□ -0.42
ETFA-208	ENST00000559602	INS	P01308	110 aa		12.43	□□□□□ -0.42
ETFA-208	ENST00000559602	PYY	P10082	97 aa		12.43	□□□□□ -0.42
ETFA-208	ENST00000559602	RHOB	P62745	196 aa		12.43	□□□□□ -0.42
ETFA-208	ENST00000559602	PMS2P11	Q13670	270 aa		12.43	□□□□□ -0.42
ETFA-208	ENST00000559602	SPINK13	Q1W4C9	94 aa		12.43	□□□□□ -0.42
ETFA-208	ENST00000559602	C1orf158	Q8N1D5	194 aa		12.43	□□□□□ -0.42
ETFA-208	ENST00000559602	OR10J6P	Q8NGY7	276 aa		12.43	□□□□□ -0.42
ETFA-208	ENST00000559602	PHLDA1	Q8WV24	401 aa	Predicted RBP	12.43	□□□□□ -0.42
ETFA-208	ENST00000559602	ODF3	Q96PU9	254 aa		12.43	□□□□□ -0.42
ETFA-208	ENST00000559602	DYNC2H1	Q8NCM8	4307 aa	Known RBP	12.43	□□□□□ -0.42
ETFA-208	ENST00000559602		H3BTX0	84 aa		12.42	□□□□□ -0.42
ETFA-208	ENST00000559602		M0R2Z0	102 aa		12.42	□□□□□ -0.42
ETFA-208	ENST00000559602	SNRPC	P09234	159 aa	Known RBP	12.42	□□□□□ -0.42
ETFA-208	ENST00000559602		Q5BKY6	102 aa		12.42	□□□□□ -0.42
ETFA-208	ENST00000559602	OR2T35	Q8NGX2	323 aa		12.42	□□□□□ -0.42
ETFA-208	ENST00000559602	OR2G3	Q8NGZ4	309 aa		12.42	□□□□□ -0.42
ETFA-208	ENST00000559602	OR51M1	Q9H341	326 aa		12.42	□□□□□ -0.42
ETFA-208	ENST00000559602	KLK5	Q9Y337	293 aa	Predicted RBP	12.42	□□□□□ -0.42
ETFA-208	ENST00000559602	RFNG	Q9Y644	331 aa		12.42	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms