RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 LINC00528Q8N1L1 170 aa7.9□□□□□ -1.14
SPG11-216ENST00000559347 RNF182Q8N6D2 247 aa7.9□□□□□ -1.14
SPG11-216ENST00000559347 TMEM37Q8WXS4 190 aa7.9□□□□□ -1.14
SPG11-216ENST00000559347 NMES1Q9C002 83 aa7.9□□□□□ -1.14
SPG11-216ENST00000559347 CELA1Q9UNI1 258 aa7.9□□□□□ -1.14
SPG11-216ENST00000559347 RNF24Q9Y225 148 aa7.9□□□□□ -1.14
SPG11-216ENST00000559347 KLK5Q9Y337 293 aaPredicted RBP7.9□□□□□ -1.14
SPG11-216ENST00000559347 CXCL2P19875 107 aa7.89□□□□□ -1.15
SPG11-216ENST00000559347 CXCL3P19876 107 aa7.89□□□□□ -1.15
SPG11-216ENST00000559347 S100A11P31949 105 aa7.89□□□□□ -1.15
SPG11-216ENST00000559347 H2BFSP57053 126 aa7.89□□□□□ -1.15
SPG11-216ENST00000559347 HBG1P69891 147 aa7.89□□□□□ -1.15
SPG11-216ENST00000559347 HBG2P69892 147 aa7.89□□□□□ -1.15
SPG11-216ENST00000559347 PSG9Q00887 426 aa7.89□□□□□ -1.15
SPG11-216ENST00000559347 BAXQ07812 192 aa7.89□□□□□ -1.15
SPG11-216ENST00000559347 OPCMLQ14982 345 aa7.89□□□□□ -1.15
SPG11-216ENST00000559347 MORN5Q5VZ52 161 aa7.89□□□□□ -1.15
SPG11-216ENST00000559347 MIC13Q5XKP0 118 aa7.89□□□□□ -1.15
SPG11-216ENST00000559347 NEU1Q99519 415 aa7.89□□□□□ -1.15
SPG11-216ENST00000559347 OR5AC2Q9NZP5 309 aa7.89□□□□□ -1.15
SPG11-216ENST00000559347 FRAS1Q86XX4 4008 aa7.88□□□□□ -1.15
SPG11-216ENST00000559347 FGF7P21781 194 aa7.88□□□□□ -1.15
SPG11-216ENST00000559347 HLA-DMBP28068 263 aa7.88□□□□□ -1.15
SPG11-216ENST00000559347 CNN1P51911 297 aaKnown RBP7.88□□□□□ -1.15
SPG11-216ENST00000559347 RAB31Q13636 194 aa7.88□□□□□ -1.15
SPG11-216ENST00000559347 LRRC37A5PQ49AS3 106 aa7.88□□□□□ -1.15
SPG11-216ENST00000559347 C10orf113Q5VZT2 155 aa7.88□□□□□ -1.15
SPG11-216ENST00000559347 LCN15Q6UWW0 184 aa7.88□□□□□ -1.15
SPG11-216ENST00000559347 Q6ZTC4 211 aa7.88□□□□□ -1.15
SPG11-216ENST00000559347 BPIFA4PQ86YQ2 179 aa7.88□□□□□ -1.15
SPG11-216ENST00000559347 ZNF738Q8NE65 137 aa7.88□□□□□ -1.15
SPG11-216ENST00000559347 OR11H7Q8NGC8 314 aa7.88□□□□□ -1.15
SPG11-216ENST00000559347 hCG_2014768A0A024R1R8 64 aa7.87□□□□□ -1.15
SPG11-216ENST00000559347 IGHV3OR16-12A0A075B7B8 117 aa7.87□□□□□ -1.15
SPG11-216ENST00000559347 C11orf94C9JXX5 98 aa7.87□□□□□ -1.15
SPG11-216ENST00000559347 E5RGE8 158 aa7.87□□□□□ -1.15
SPG11-216ENST00000559347 H0YIZ8 118 aa7.87□□□□□ -1.15
SPG11-216ENST00000559347 SLC17A3O00476 420 aa7.87□□□□□ -1.15
SPG11-216ENST00000559347 DUSP14O95147 198 aaKnown RBP7.87□□□□□ -1.15
SPG11-216ENST00000559347 IGLC2P0DOY2 106 aa7.87□□□□□ -1.15
SPG11-216ENST00000559347 RPL29P47914 159 aaKnown RBP7.87□□□□□ -1.15
SPG11-216ENST00000559347 B2MP61769 119 aa7.87□□□□□ -1.15
SPG11-216ENST00000559347 ATP6V1FQ16864 119 aa7.87□□□□□ -1.15
SPG11-216ENST00000559347 Q6ZRG5 221 aa7.87□□□□□ -1.15
SPG11-216ENST00000559347 C1orf158Q8N1D5 194 aa7.87□□□□□ -1.15
SPG11-216ENST00000559347 OR5C1Q8NGR4 320 aa7.87□□□□□ -1.15
SPG11-216ENST00000559347 OR1L4Q8NGR5 311 aa7.87□□□□□ -1.15
SPG11-216ENST00000559347 CHAC2Q8WUX2 184 aa7.87□□□□□ -1.15
SPG11-216ENST00000559347 PFDN5Q99471 154 aa7.87□□□□□ -1.15
SPG11-216ENST00000559347 SLC50A1Q9BRV3 221 aa7.87□□□□□ -1.15
SPG11-216ENST00000559347 NPCDR1Q9BY65 106 aa7.87□□□□□ -1.15
SPG11-216ENST00000559347 SLC39A9Q9NUM3 307 aa7.87□□□□□ -1.15
SPG11-216ENST00000559347 SMIM9A6NGZ8 99 aa7.86□□□□□ -1.15
SPG11-216ENST00000559347 M0R2Z0 102 aa7.86□□□□□ -1.15
SPG11-216ENST00000559347 SSNA1O43805 119 aa7.86□□□□□ -1.15
SPG11-216ENST00000559347 MPDU1O75352 247 aa7.86□□□□□ -1.15
SPG11-216ENST00000559347 LY6G6CO95867 125 aa7.86□□□□□ -1.15
SPG11-216ENST00000559347 RLN2P04090 185 aa7.86□□□□□ -1.15
SPG11-216ENST00000559347 SNRPCP09234 159 aaKnown RBP7.86□□□□□ -1.15
SPG11-216ENST00000559347 CYCSP99999 105 aaKnown RBP7.86□□□□□ -1.15
SPG11-216ENST00000559347 NHLH2Q02577 135 aa7.86□□□□□ -1.15
SPG11-216ENST00000559347 PSG3Q16557 428 aa7.86□□□□□ -1.15
SPG11-216ENST00000559347 SPINK13Q1W4C9 94 aa7.86□□□□□ -1.15
SPG11-216ENST00000559347 LRRC20Q8TCA0 184 aa7.86□□□□□ -1.15
SPG11-216ENST00000559347 C2CD4CQ8TF44 421 aa7.86□□□□□ -1.15
SPG11-216ENST00000559347 PPP1R1CQ8WVI7 109 aa7.86□□□□□ -1.15
SPG11-216ENST00000559347 IGF2BP2-AS1Q96M15 143 aa7.86□□□□□ -1.15
SPG11-216ENST00000559347 SLC25A31Q9H0C2 315 aa7.86□□□□□ -1.15
SPG11-216ENST00000559347 DNAJC4Q9NNZ3 241 aa7.86□□□□□ -1.15
SPG11-216ENST00000559347 ZNF331Q9NQX6 463 aaPredicted RBP7.86□□□□□ -1.15
SPG11-216ENST00000559347 GOLT1BQ9Y3E0 138 aa7.86□□□□□ -1.15
SPG11-216ENST00000559347 RFNGQ9Y644 331 aa7.86□□□□□ -1.15
SPG11-216ENST00000559347 PXMP4Q9Y6I8 212 aa7.86□□□□□ -1.15
SPG11-216ENST00000559347 TRAV10A0A0B4J240 114 aa7.85□□□□□ -1.15
SPG11-216ENST00000559347 TRAV5A0A0B4J249 113 aa7.85□□□□□ -1.15
SPG11-216ENST00000559347 TMEM189A5PLL7 270 aa7.85□□□□□ -1.15
SPG11-216ENST00000559347 H3BTX0 84 aa7.85□□□□□ -1.15
SPG11-216ENST00000559347 BOLA2-SMG1P6H3BVE0 249 aa7.85□□□□□ -1.15
SPG11-216ENST00000559347 CRXO43186 299 aaPredicted RBP7.85□□□□□ -1.15
SPG11-216ENST00000559347 INSP01308 110 aa7.85□□□□□ -1.15
SPG11-216ENST00000559347 AMBPP02760 352 aa7.85□□□□□ -1.15
SPG11-216ENST00000559347 PRB4P10163 310 aaPredicted RBP7.85□□□□□ -1.15
SPG11-216ENST00000559347 HIST1H1AQ02539 215 aaPredicted RBP7.85□□□□□ -1.15
SPG11-216ENST00000559347 BAP18Q8IXM2 172 aa7.85□□□□□ -1.15
SPG11-216ENST00000559347 OR8A1Q8NGG7 326 aa7.85□□□□□ -1.15
SPG11-216ENST00000559347 THAP6Q8TBB0 222 aa7.85□□□□□ -1.15
SPG11-216ENST00000559347 RPUSD4Q96CM3 377 aaKnown RBP7.85□□□□□ -1.15
SPG11-216ENST00000559347 H3BQ15 152 aa7.84□□□□□ -1.15
SPG11-216ENST00000559347 MPC2O95563 127 aa7.84□□□□□ -1.15
SPG11-216ENST00000559347 HBE1P02100 147 aa7.84□□□□□ -1.15
SPG11-216ENST00000559347 PET100P0DJ07 73 aa7.84□□□□□ -1.15
SPG11-216ENST00000559347 TCTAP57738 103 aa7.84□□□□□ -1.15
SPG11-216ENST00000559347 CLINT1Q14677 625 aa7.84□□□□□ -1.15
SPG11-216ENST00000559347 C12orf74Q32Q52 190 aa7.84□□□□□ -1.15
SPG11-216ENST00000559347 LGALS9CQ6DKI2 356 aa7.84□□□□□ -1.15
SPG11-216ENST00000559347 ZNF767PQ75MW2 155 aa7.84□□□□□ -1.15
SPG11-216ENST00000559347 SAT2Q96F10 170 aaPredicted RBP7.84□□□□□ -1.15
SPG11-216ENST00000559347 TRAV12-2A0A075B6T6 113 aa7.83□□□□□ -1.16
SPG11-216ENST00000559347 LOC102723971A0A1B0GUV8 181 aa7.83□□□□□ -1.16
SPG11-216ENST00000559347 PTTG1O95997 202 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms