RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 FAM122CQ6P4D5 195 aa11.03□□□□□ -0.64
SNRPA1-207ENST00000559309 PQLC2Q6ZP29 291 aa11.03□□□□□ -0.64
SNRPA1-207ENST00000559309 OR51M1Q9H341 326 aa11.03□□□□□ -0.64
SNRPA1-207ENST00000559309 ISLRO14498 428 aa11.02□□□□□ -0.65
SNRPA1-207ENST00000559309 PYYP10082 97 aa11.02□□□□□ -0.65
SNRPA1-207ENST00000559309 TAS2R45P59539 299 aa11.02□□□□□ -0.65
SNRPA1-207ENST00000559309 PAFAH1B2P68402 229 aa11.02□□□□□ -0.65
SNRPA1-207ENST00000559309 ZNF331Q9NQX6 463 aaPredicted RBP11.02□□□□□ -0.65
SNRPA1-207ENST00000559309 TRAV1-1A0A0B4J248 108 aa11.01□□□□□ -0.65
SNRPA1-207ENST00000559309 A0A1W2PPV4 95 aa11.01□□□□□ -0.65
SNRPA1-207ENST00000559309 SLC17A3O00476 420 aa11.01□□□□□ -0.65
SNRPA1-207ENST00000559309 EIF3GO75821 320 aaKnown RBP eCLIP11.01□□□□□ -0.65
SNRPA1-207ENST00000559309 CD7P09564 240 aa11.01□□□□□ -0.65
SNRPA1-207ENST00000559309 PSMB3P49720 205 aa11.01□□□□□ -0.65
SNRPA1-207ENST00000559309 LCN15Q6UWW0 184 aa11.01□□□□□ -0.65
SNRPA1-207ENST00000559309 RNF141Q8WVD5 230 aa11.01□□□□□ -0.65
SNRPA1-207ENST00000559309 PAXXQ9BUH6 204 aa11.01□□□□□ -0.65
SNRPA1-207ENST00000559309 MAP6D1Q9H9H5 199 aa11.01□□□□□ -0.65
SNRPA1-207ENST00000559309 A8MZ25 164 aa11□□□□□ -0.65
SNRPA1-207ENST00000559309 NBEAP1P0C6P0 100 aa11□□□□□ -0.65
SNRPA1-207ENST00000559309 ARL14EPLP0DKL9 152 aa11□□□□□ -0.65
SNRPA1-207ENST00000559309 GUCA2BQ16661 112 aa11□□□□□ -0.65
SNRPA1-207ENST00000559309 TEX261Q6UWH6 196 aa11□□□□□ -0.65
SNRPA1-207ENST00000559309 GBGT1Q8N5D6 347 aa11□□□□□ -0.65
SNRPA1-207ENST00000559309 LYPD6BQ8NI32 183 aa11□□□□□ -0.65
SNRPA1-207ENST00000559309 IGKV3-7A0A075B6H7 116 aa10.99□□□□□ -0.65
SNRPA1-207ENST00000559309 CXorf1O96002 111 aa10.99□□□□□ -0.65
SNRPA1-207ENST00000559309 ATF4P18848 351 aaPredicted RBP10.99□□□□□ -0.65
SNRPA1-207ENST00000559309 GCHFRP30047 84 aa10.99□□□□□ -0.65
SNRPA1-207ENST00000559309 PMS2P11Q13670 270 aa10.99□□□□□ -0.65
SNRPA1-207ENST00000559309 FAM74A1Q5RGS3 127 aa10.99□□□□□ -0.65
SNRPA1-207ENST00000559309 ALKAL2Q6UX46 152 aa10.99□□□□□ -0.65
SNRPA1-207ENST00000559309 LYPD1Q8N2G4 141 aa10.99□□□□□ -0.65
SNRPA1-207ENST00000559309 SLC50A1Q9BRV3 221 aa10.99□□□□□ -0.65
SNRPA1-207ENST00000559309 AURKAIP1Q9NWT8 199 aaPredicted RBP10.99□□□□□ -0.65
SNRPA1-207ENST00000559309 CLEC5AQ9NY25 188 aa10.99□□□□□ -0.65
SNRPA1-207ENST00000559309 MAP1LC3B2A6NCE7 125 aa10.98□□□□□ -0.65
SNRPA1-207ENST00000559309 A8MTW9 85 aa10.98□□□□□ -0.65
SNRPA1-207ENST00000559309 DNASE2O00115 360 aaPredicted RBP10.98□□□□□ -0.65
SNRPA1-207ENST00000559309 HMGB3O15347 200 aaKnown RBP10.98□□□□□ -0.65
SNRPA1-207ENST00000559309 OR7C2O60412 319 aa10.98□□□□□ -0.65
SNRPA1-207ENST00000559309 OR10J4P0C629 311 aa10.98□□□□□ -0.65
SNRPA1-207ENST00000559309 CMC4P56277 68 aaPredicted RBP10.98□□□□□ -0.65
SNRPA1-207ENST00000559309 RPL11P62913 178 aaKnown RBP10.98□□□□□ -0.65
SNRPA1-207ENST00000559309 C20orf173Q96LM9 149 aa10.98□□□□□ -0.65
SNRPA1-207ENST00000559309 CITED4Q96RK1 184 aa10.98□□□□□ -0.65
SNRPA1-207ENST00000559309 PRR25Q96S07 402 aa10.98□□□□□ -0.65
SNRPA1-207ENST00000559309 MAP1LC3BQ9GZQ8 125 aa10.98□□□□□ -0.65
SNRPA1-207ENST00000559309 DNAH9Q9NYC9 4486 aa10.98□□□□□ -0.65
SNRPA1-207ENST00000559309 TFPI2P48307 235 aa10.97□□□□□ -0.65
SNRPA1-207ENST00000559309 CD81P60033 236 aa10.97□□□□□ -0.65
SNRPA1-207ENST00000559309 UBE2L3P68036 154 aaKnown RBP10.97□□□□□ -0.65
SNRPA1-207ENST00000559309 LINC00322Q6ZN03 302 aaPredicted RBP10.97□□□□□ -0.65
SNRPA1-207ENST00000559309 ZNF680Q8NEM1 530 aa10.97□□□□□ -0.65
SNRPA1-207ENST00000559309 FAM213BQ8TBF2 198 aa10.97□□□□□ -0.65
SNRPA1-207ENST00000559309 MRPL53Q96EL3 112 aaKnown RBP10.97□□□□□ -0.65
SNRPA1-207ENST00000559309 TMEM167BQ9NRX6 74 aa10.97□□□□□ -0.65
SNRPA1-207ENST00000559309 H3BTX0 84 aa10.96□□□□□ -0.65
SNRPA1-207ENST00000559309 K7EIL1 84 aa10.96□□□□□ -0.65
SNRPA1-207ENST00000559309 SNRPCP09234 159 aaKnown RBP10.96□□□□□ -0.65
SNRPA1-207ENST00000559309 H2AFB1P0C5Y9 115 aa10.96□□□□□ -0.65
SNRPA1-207ENST00000559309 HLA-DMBP28068 263 aa10.96□□□□□ -0.65
SNRPA1-207ENST00000559309 SNRPD3P62318 126 aaKnown RBP10.96□□□□□ -0.65
SNRPA1-207ENST00000559309 IFITM2Q01629 132 aa10.96□□□□□ -0.65
SNRPA1-207ENST00000559309 PSG3Q16557 428 aa10.96□□□□□ -0.65
SNRPA1-207ENST00000559309 GTSCR1Q86UQ5 136 aa10.96□□□□□ -0.65
SNRPA1-207ENST00000559309 WFDC3Q8IUB2 231 aa10.96□□□□□ -0.65
SNRPA1-207ENST00000559309 ARL6IP6Q8N6S5 226 aa10.96□□□□□ -0.65
SNRPA1-207ENST00000559309 C16orf92Q96LL3 132 aa10.96□□□□□ -0.65
SNRPA1-207ENST00000559309 CLUHP3Q96NS8 147 aa10.96□□□□□ -0.65
SNRPA1-207ENST00000559309 TMPRSS5Q9H3S3 457 aa10.96□□□□□ -0.65
SNRPA1-207ENST00000559309 ARL2-SNX15V9GYD0 113 aa10.96□□□□□ -0.65
SNRPA1-207ENST00000559309 A0A1W2PRE2 83 aa10.95□□□□□ -0.66
SNRPA1-207ENST00000559309 OR11H12B2RN74 326 aa10.95□□□□□ -0.66
SNRPA1-207ENST00000559309 ZNF688P0C7X2 276 aa10.95□□□□□ -0.66
SNRPA1-207ENST00000559309 ID1P41134 155 aa10.95□□□□□ -0.66
SNRPA1-207ENST00000559309 DEFB131AP59861 70 aa10.95□□□□□ -0.66
SNRPA1-207ENST00000559309 PSG9Q00887 426 aa10.95□□□□□ -0.66
SNRPA1-207ENST00000559309 RNF182Q8N6D2 247 aa10.95□□□□□ -0.66
SNRPA1-207ENST00000559309 WFDC10AQ9H1F0 79 aa10.95□□□□□ -0.66
SNRPA1-207ENST00000559309 FGF8P55075 233 aaPredicted RBP10.94□□□□□ -0.66
SNRPA1-207ENST00000559309 CCL20P78556 96 aa10.94□□□□□ -0.66
SNRPA1-207ENST00000559309 ZNF124Q15973 351 aa10.94□□□□□ -0.66
SNRPA1-207ENST00000559309 IGFL4Q6B9Z1 124 aa10.94□□□□□ -0.66
SNRPA1-207ENST00000559309 CCDC28AQ8IWP9 274 aa10.94□□□□□ -0.66
SNRPA1-207ENST00000559309 LRRC20Q8TCA0 184 aa10.94□□□□□ -0.66
SNRPA1-207ENST00000559309 SFT2D1Q8WV19 159 aa10.94□□□□□ -0.66
SNRPA1-207ENST00000559309 SAV1Q9H4B6 383 aaPredicted RBP10.94□□□□□ -0.66
SNRPA1-207ENST00000559309 UBQLN2Q9UHD9 624 aa10.94□□□□□ -0.66
SNRPA1-207ENST00000559309 PRELID1Q9Y255 219 aa10.94□□□□□ -0.66
SNRPA1-207ENST00000559309 PSMG4Q5JS54 123 aa10.93□□□□□ -0.66
SNRPA1-207ENST00000559309 FOXI2Q6ZQN5 318 aa10.93□□□□□ -0.66
SNRPA1-207ENST00000559309 APRG1Q8IVJ8 170 aa10.93□□□□□ -0.66
SNRPA1-207ENST00000559309 EXOC3-AS1Q8N2X6 119 aa10.93□□□□□ -0.66
SNRPA1-207ENST00000559309 DEFB125Q8N687 156 aa10.93□□□□□ -0.66
SNRPA1-207ENST00000559309 BLNKQ8WV28 456 aa10.93□□□□□ -0.66
SNRPA1-207ENST00000559309 Q9H3A6 140 aa10.93□□□□□ -0.66
SNRPA1-207ENST00000559309 OTORQ9NRC9 128 aa10.93□□□□□ -0.66
SNRPA1-207ENST00000559309 A0A0J9YX75 114 aa10.92□□□□□ -0.66
SNRPA1-207ENST00000559309 FAM74A7A6NL05 159 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms