RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 POU2AF1Q16633 256 aa5.78□□□□□ -1.48
USP3-210ENST00000559192 RNASE8Q8TDE3 154 aaKnown RBP5.78□□□□□ -1.48
USP3-210ENST00000559192 SPANXCQ9NY87 97 aa5.78□□□□□ -1.48
USP3-210ENST00000559192 RPUSD1Q9UJJ7 312 aaKnown RBP5.78□□□□□ -1.48
USP3-210ENST00000559192 TMEM131Q92545 1883 aa5.78□□□□□ -1.48
USP3-210ENST00000559192 C9orf118A6NHY6 69 aa5.78□□□□□ -1.48
USP3-210ENST00000559192 SMKR1H3BMG3 65 aa5.78□□□□□ -1.48
USP3-210ENST00000559192 H3BMM0 161 aa5.78□□□□□ -1.48
USP3-210ENST00000559192 K7EP34 96 aa5.78□□□□□ -1.48
USP3-210ENST00000559192 DKK1O94907 266 aa5.78□□□□□ -1.48
USP3-210ENST00000559192 IGHV1-46P01743 117 aa5.78□□□□□ -1.48
USP3-210ENST00000559192 IFI27P40305 119 aaPredicted RBP5.78□□□□□ -1.48
USP3-210ENST00000559192 TMEM30BQ3MIR4 351 aa5.78□□□□□ -1.48
USP3-210ENST00000559192 GATD1Q8NB37 220 aa5.78□□□□□ -1.48
USP3-210ENST00000559192 C8orf46Q8TAG6 207 aa5.78□□□□□ -1.48
USP3-210ENST00000559192 RNF138Q8WVD3 245 aa5.78□□□□□ -1.48
USP3-210ENST00000559192 UBE2WQ96B02 151 aa5.78□□□□□ -1.48
USP3-210ENST00000559192 ZNF625Q96I27 306 aaPredicted RBP5.78□□□□□ -1.48
USP3-210ENST00000559192 TMEM14BQ9NUH8 114 aa5.78□□□□□ -1.48
USP3-210ENST00000559192 TNFRSF18Q9Y5U5 241 aa5.78□□□□□ -1.48
USP3-210ENST00000559192 KIAA2026Q5HYC2 2103 aa5.77□□□□□ -1.48
USP3-210ENST00000559192 F8W1H4 67 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 SRSF1Q07955 248 aaKnown RBP eCLIP5.77□□□□□ -1.49
USP3-210ENST00000559192 FAM159AQ6UWV7 190 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 PRSS57Q6UWY2 283 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 Q8NFD4 153 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 CHAC1Q9BUX1 264 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 IGKV2-40A0A087WW87 121 aaPredicted RBP5.77□□□□□ -1.49
USP3-210ENST00000559192 PMS2P5A8MQ11 134 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 H0YJW9 148 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 IGKV2D-40P01614 121 aaPredicted RBP5.77□□□□□ -1.49
USP3-210ENST00000559192 RAX2Q96IS3 184 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 GAFA1Q96PS6 74 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 SPANXDQ9BXN6 97 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 IGHV3-64A0A075B6Q5 118 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 IGHV3OR16-12A0A075B7B8 117 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 C15orf65H3BRN8 121 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 H7C1H1 209 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 TOMM40O96008 361 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 NPC2P61916 151 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 LYZL1Q6UWQ5 148 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 SPACA3Q8IXA5 215 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 DYNLRB2Q8TF09 96 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 C1QTNF4Q9BXJ3 329 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 ASIPP42127 132 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 BSPH1Q075Z2 132 aa5.77□□□□□ -1.49
USP3-210ENST00000559192 CEACAM4O75871 244 aa5.76□□□□□ -1.49
USP3-210ENST00000559192 RP1L1Q8IWN7 2480 aaPredicted RBP5.76□□□□□ -1.49
USP3-210ENST00000559192 IGLC7A0M8Q6 106 aa5.76□□□□□ -1.49
USP3-210ENST00000559192 SMAD7O15105 426 aaKnown RBP5.76□□□□□ -1.49
USP3-210ENST00000559192 WNT2P09544 360 aa5.76□□□□□ -1.49
USP3-210ENST00000559192 ARMS2P0C7Q2 107 aa5.76□□□□□ -1.49
USP3-210ENST00000559192 TMEM200BQ69YZ2 307 aa5.76□□□□□ -1.49
USP3-210ENST00000559192 SLC25A39Q9BZJ4 359 aaPredicted RBP5.76□□□□□ -1.49
USP3-210ENST00000559192 C11orf52Q96A22 123 aa5.76□□□□□ -1.49
USP3-210ENST00000559192 IGFL4Q6B9Z1 124 aa5.76□□□□□ -1.49
USP3-210ENST00000559192 Q86TA4 180 aa5.76□□□□□ -1.49
USP3-210ENST00000559192 ZC2HC1AQ96GY0 325 aa5.76□□□□□ -1.49
USP3-210ENST00000559192 PCNX3Q9H6A9 2034 aa5.76□□□□□ -1.49
USP3-210ENST00000559192 CFHR2P36980 270 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 BVES-AS1Q5T3Y7 98 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 RNF125Q96EQ8 232 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 LAMTOR3Q9UHA4 124 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 ORMDL2Q53FV1 153 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 LINC00173Q6ZV60 143 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 AMN1Q8IY45 258 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 SVIPQ8NHG7 77 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 NPIPB5A8MRT5 1133 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 J3KT08 172 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 PPBPP02775 128 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 C17orf58Q2M2W7 97 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 CENPFP49454 3210 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 ICE1Q9Y2F5 2266 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 LYNX1G3V0Z9 82 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 LYNX1P0DP58 116 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 SLC25A48Q6ZT89 311 aaKnown RBP5.75□□□□□ -1.49
USP3-210ENST00000559192 MDS2Q8NDY4 140 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 C8orf49Q96NF6 230 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 KMT2EQ8IZD2 1858 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 ARHGAP21Q5T5U3 1957 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 C17orf100A8MU93 164 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 CRPP02741 224 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 ZNF688P0C7X2 276 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 Q8TAT8 98 aa5.75□□□□□ -1.49
USP3-210ENST00000559192 TMEM213A2RRL7 107 aa5.74□□□□□ -1.49
USP3-210ENST00000559192 SH2D1AO60880 128 aa5.74□□□□□ -1.49
USP3-210ENST00000559192 PRR20EP86478 221 aa5.74□□□□□ -1.49
USP3-210ENST00000559192 PRR20CP86479 221 aa5.74□□□□□ -1.49
USP3-210ENST00000559192 PRR20DP86480 221 aa5.74□□□□□ -1.49
USP3-210ENST00000559192 PRR20BP86481 221 aa5.74□□□□□ -1.49
USP3-210ENST00000559192 PRR20AP86496 221 aa5.74□□□□□ -1.49
USP3-210ENST00000559192 LINC01559Q495D7 138 aa5.74□□□□□ -1.49
USP3-210ENST00000559192 MORN5Q5VZ52 161 aa5.74□□□□□ -1.49
USP3-210ENST00000559192 DEFB104AQ8WTQ1 72 aa5.74□□□□□ -1.49
USP3-210ENST00000559192 TRAV26-1A0A087WT03 109 aa5.74□□□□□ -1.49
USP3-210ENST00000559192 SP9P0CG40 484 aa5.74□□□□□ -1.49
USP3-210ENST00000559192 MRPL23Q16540 153 aaKnown RBP5.74□□□□□ -1.49
USP3-210ENST00000559192 C5orf47Q569G3 176 aa5.74□□□□□ -1.49
USP3-210ENST00000559192 ARPC1AQ92747 370 aa5.74□□□□□ -1.49
USP3-210ENST00000559192 TP73-AS1Q9UF72 201 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms