RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 TRGC1P0CF51 173 aa4.2□□□□□ -1.74
CASC4-208ENST00000559151 FAM236CP0DP71 79 aa4.2□□□□□ -1.74
CASC4-208ENST00000559151 COX4I1P13073 169 aa4.2□□□□□ -1.74
CASC4-208ENST00000559151 TSNQ15631 228 aaKnown RBP4.2□□□□□ -1.74
CASC4-208ENST00000559151 ARHGAP11BQ3KRB8 267 aa4.2□□□□□ -1.74
CASC4-208ENST00000559151 KRTAP5-7Q6L8G8 165 aa4.2□□□□□ -1.74
CASC4-208ENST00000559151 LRRC18Q8N456 261 aa4.2□□□□□ -1.74
CASC4-208ENST00000559151 C2orf88Q9BSF0 95 aa4.2□□□□□ -1.74
CASC4-208ENST00000559151 CCDC90BQ9GZT6 254 aa4.2□□□□□ -1.74
CASC4-208ENST00000559151 ECM29Q5VYK3 1845 aa4.2□□□□□ -1.74
CASC4-208ENST00000559151 FRYLO94915 3013 aa4.2□□□□□ -1.74
CASC4-208ENST00000559151 DNAH14Q0VDD8 3507 aa4.2□□□□□ -1.74
CASC4-208ENST00000559151 SIGLEC16A6NMB1 481 aa4.19□□□□□ -1.74
CASC4-208ENST00000559151 KPNA4O00629 521 aaPredicted RBP4.19□□□□□ -1.74
CASC4-208ENST00000559151 S100GP29377 79 aa4.19□□□□□ -1.74
CASC4-208ENST00000559151 EIF2B2P49770 351 aaKnown RBP4.19□□□□□ -1.74
CASC4-208ENST00000559151 SUPT4H1P63272 117 aaKnown RBP4.19□□□□□ -1.74
CASC4-208ENST00000559151 RUNX1Q01196 453 aa4.19□□□□□ -1.74
CASC4-208ENST00000559151 C11orf40Q8WZ69 217 aa4.19□□□□□ -1.74
CASC4-208ENST00000559151 TSPAN32Q96QS1 320 aa4.19□□□□□ -1.74
CASC4-208ENST00000559151 DCSTAMPQ9H295 470 aa4.19□□□□□ -1.74
CASC4-208ENST00000559151 MYO15AQ9UKN7 3530 aa4.18□□□□□ -1.74
CASC4-208ENST00000559151 TRAV26-2A0A0B4J265 109 aa4.18□□□□□ -1.74
CASC4-208ENST00000559151 OGNP20774 298 aaKnown RBP4.18□□□□□ -1.74
CASC4-208ENST00000559151 RPS4Y1P22090 263 aaKnown RBP4.18□□□□□ -1.74
CASC4-208ENST00000559151 CDC42P60953 191 aa4.18□□□□□ -1.74
CASC4-208ENST00000559151 LIN52Q52LA3 116 aa4.18□□□□□ -1.74
CASC4-208ENST00000559151 RPL22L1Q6P5R6 122 aaKnown RBP4.18□□□□□ -1.74
CASC4-208ENST00000559151 COA5Q86WW8 74 aa4.18□□□□□ -1.74
CASC4-208ENST00000559151 TMEM86AQ8N2M4 240 aa4.18□□□□□ -1.74
CASC4-208ENST00000559151 BIN3Q9NQY0 253 aa4.18□□□□□ -1.74
CASC4-208ENST00000559151 PRELID3BQ9Y3B1 194 aa4.18□□□□□ -1.74
CASC4-208ENST00000559151 DOCK10Q96BY6 2186 aa4.18□□□□□ -1.74
CASC4-208ENST00000559151 ACACBO00763 2458 aa4.17□□□□□ -1.74
CASC4-208ENST00000559151 USP24Q9UPU5 2620 aa4.17□□□□□ -1.74
CASC4-208ENST00000559151 PRRC2BQ5JSZ5 2229 aaKnown RBP4.17□□□□□ -1.74
CASC4-208ENST00000559151 TRBV10-2A0A0K0K1G8 114 aa4.17□□□□□ -1.74
CASC4-208ENST00000559151 MEIS3P1A6NDR6 274 aa4.17□□□□□ -1.74
CASC4-208ENST00000559151 PPP5D1E7EU14 171 aa4.17□□□□□ -1.74
CASC4-208ENST00000559151 OR10J4P0C629 311 aa4.17□□□□□ -1.74
CASC4-208ENST00000559151 EDDM3AQ14507 147 aa4.17□□□□□ -1.74
CASC4-208ENST00000559151 OR8J3Q8NGG0 315 aa4.17□□□□□ -1.74
CASC4-208ENST00000559151 MIXL1Q9H2W2 232 aa4.17□□□□□ -1.74
CASC4-208ENST00000559151 UFC1Q9Y3C8 167 aa4.17□□□□□ -1.74
CASC4-208ENST00000559151 HSPB11Q9Y547 144 aa4.17□□□□□ -1.74
CASC4-208ENST00000559151 DMXL1Q9Y485 3027 aa4.17□□□□□ -1.74
CASC4-208ENST00000559151 FAM186AA6NE01 2351 aa4.17□□□□□ -1.74
CASC4-208ENST00000559151 GCN1Q92616 2671 aaKnown RBP4.17□□□□□ -1.74
CASC4-208ENST00000559151 ASH1LQ9NR48 2969 aaKnown RBP4.17□□□□□ -1.74
CASC4-208ENST00000559151 MAST4O15021 2626 aa4.16□□□□□ -1.74
CASC4-208ENST00000559151 FLNBO75369 2602 aaKnown RBP4.16□□□□□ -1.74
CASC4-208ENST00000559151 GPR31O00270 319 aa4.16□□□□□ -1.74
CASC4-208ENST00000559151 ORC5O43913 435 aa4.16□□□□□ -1.74
CASC4-208ENST00000559151 SULT1C4O75897 302 aa4.16□□□□□ -1.74
CASC4-208ENST00000559151 HAND1O96004 215 aa4.16□□□□□ -1.74
CASC4-208ENST00000559151 IFNA1P01562 189 aa4.16□□□□□ -1.74
CASC4-208ENST00000559151 IL9P15248 144 aa4.16□□□□□ -1.74
CASC4-208ENST00000559151 ERP29P30040 261 aaKnown RBP4.16□□□□□ -1.74
CASC4-208ENST00000559151 GNG3P63215 75 aa4.16□□□□□ -1.74
CASC4-208ENST00000559151 TMEM97Q5BJF2 176 aa4.16□□□□□ -1.74
CASC4-208ENST00000559151 ANGPTL5Q86XS5 388 aa4.16□□□□□ -1.74
CASC4-208ENST00000559151 SMIM20Q8N5G0 67 aa4.16□□□□□ -1.74
CASC4-208ENST00000559151 BTF3L4Q96K17 158 aa4.16□□□□□ -1.74
CASC4-208ENST00000559151 SIGMAR1Q99720 223 aa4.16□□□□□ -1.74
CASC4-208ENST00000559151 TMEM147Q9BVK8 224 aa4.16□□□□□ -1.74
CASC4-208ENST00000559151 MYH3P11055 1940 aa4.16□□□□□ -1.74
CASC4-208ENST00000559151 FAM208BQ5VWN6 2430 aa4.16□□□□□ -1.74
CASC4-208ENST00000559151 TECTAO75443 2155 aa4.16□□□□□ -1.74
CASC4-208ENST00000559151 BRWD1Q9NSI6 2320 aa4.15□□□□□ -1.74
CASC4-208ENST00000559151 NCOR2Q9Y618 2525 aa4.15□□□□□ -1.74
CASC4-208ENST00000559151 RBP1P09455 135 aa4.15□□□□□ -1.75
CASC4-208ENST00000559151 SMIM6P0DI80 62 aa4.15□□□□□ -1.75
CASC4-208ENST00000559151 SMIM21Q3B7S5 101 aa4.15□□□□□ -1.75
CASC4-208ENST00000559151 OR13C4Q8NGS5 318 aa4.15□□□□□ -1.75
CASC4-208ENST00000559151 GRPEL2Q8TAA5 225 aa4.15□□□□□ -1.75
CASC4-208ENST00000559151 DOK5Q9P104 306 aa4.15□□□□□ -1.75
CASC4-208ENST00000559151 SLC35A3Q9Y2D2 325 aa4.15□□□□□ -1.75
CASC4-208ENST00000559151 DMDP11532 3685 aa4.15□□□□□ -1.75
CASC4-208ENST00000559151 RIF1Q5UIP0 2472 aaKnown RBP4.15□□□□□ -1.75
CASC4-208ENST00000559151 NUMA1Q14980 2115 aa4.15□□□□□ -1.75
CASC4-208ENST00000559151 A0A1B0GUL6 1792 aa4.14□□□□□ -1.75
CASC4-208ENST00000559151 NAV2Q8IVL1 2488 aa4.14□□□□□ -1.75
CASC4-208ENST00000559151 EXOC1LA0A1B0GW35 172 aa4.14□□□□□ -1.75
CASC4-208ENST00000559151 NFYAP23511 347 aaPredicted RBP4.14□□□□□ -1.75
CASC4-208ENST00000559151 GNG2P59768 71 aa4.14□□□□□ -1.75
CASC4-208ENST00000559151 MCFD2Q8NI22 146 aa4.14□□□□□ -1.75
CASC4-208ENST00000559151 SKA2Q8WVK7 121 aaPredicted RBP4.14□□□□□ -1.75
CASC4-208ENST00000559151 CMSS1Q9BQ75 279 aaKnown RBP4.14□□□□□ -1.75
CASC4-208ENST00000559151 TCEAL7Q9BRU2 100 aa4.14□□□□□ -1.75
CASC4-208ENST00000559151 ARAP2Q8WZ64 1704 aa4.14□□□□□ -1.75
CASC4-208ENST00000559151 ASPMQ8IZT6 3477 aa4.14□□□□□ -1.75
CASC4-208ENST00000559151 PLXNB2O15031 1838 aa4.14□□□□□ -1.75
CASC4-208ENST00000559151 SPEF2Q9C093 1822 aa4.14□□□□□ -1.75
CASC4-208ENST00000559151 CACNA1HO95180 2353 aa4.13□□□□□ -1.75
CASC4-208ENST00000559151 PRORSD1PA6NEY8 169 aa4.13□□□□□ -1.75
CASC4-208ENST00000559151 DPRXA6NFQ7 191 aa4.13□□□□□ -1.75
CASC4-208ENST00000559151 K7EP13 123 aa4.13□□□□□ -1.75
CASC4-208ENST00000559151 DLEU1O43261 78 aa4.13□□□□□ -1.75
CASC4-208ENST00000559151 OR2J2O76002 312 aa4.13□□□□□ -1.75
CASC4-208ENST00000559151 AKR1C3P42330 323 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms