RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 SPP1P10451 314 aa8.02□□□□□ -1.13
TPM1-217ENST00000559108 RPL35AP18077 110 aaKnown RBP8.02□□□□□ -1.13
TPM1-217ENST00000559108 M6PRP20645 277 aa8.02□□□□□ -1.13
TPM1-217ENST00000559108 FHITP49789 147 aa8.02□□□□□ -1.13
TPM1-217ENST00000559108 PAFAH1B2P68402 229 aa8.02□□□□□ -1.13
TPM1-217ENST00000559108 PHYHIPLQ96FC7 376 aa8.02□□□□□ -1.13
TPM1-217ENST00000559108 GPR82Q96P67 336 aa8.02□□□□□ -1.13
TPM1-217ENST00000559108 ZNF471Q9BX82 626 aaPredicted RBP8.02□□□□□ -1.13
TPM1-217ENST00000559108 ZNF331Q9NQX6 463 aaPredicted RBP8.02□□□□□ -1.13
TPM1-217ENST00000559108 TMEM14CQ9P0S9 112 aa8.02□□□□□ -1.13
TPM1-217ENST00000559108 TGP01266 2768 aa8.02□□□□□ -1.13
TPM1-217ENST00000559108 BORCS7-ASMTA0A0B4J1R7 106 aa8.01□□□□□ -1.13
TPM1-217ENST00000559108 JTBO76095 146 aa8.01□□□□□ -1.13
TPM1-217ENST00000559108 ZNF705DP0CH99 300 aaPredicted RBP8.01□□□□□ -1.13
TPM1-217ENST00000559108 ZNF705BP0CI00 300 aaPredicted RBP8.01□□□□□ -1.13
TPM1-217ENST00000559108 ATF4P18848 351 aaPredicted RBP8.01□□□□□ -1.13
TPM1-217ENST00000559108 C4BPBP20851 252 aa8.01□□□□□ -1.13
TPM1-217ENST00000559108 PSMB3P49720 205 aa8.01□□□□□ -1.13
TPM1-217ENST00000559108 HAGHQ16775 308 aa8.01□□□□□ -1.13
TPM1-217ENST00000559108 ZFP69Q49AA0 526 aa8.01□□□□□ -1.13
TPM1-217ENST00000559108 TRPT1Q86TN4 253 aaKnown RBP8.01□□□□□ -1.13
TPM1-217ENST00000559108 BPIFA4PQ86YQ2 179 aa8.01□□□□□ -1.13
TPM1-217ENST00000559108 OR10G4Q8NGN3 311 aa8.01□□□□□ -1.13
TPM1-217ENST00000559108 OR10G9Q8NGN4 311 aa8.01□□□□□ -1.13
TPM1-217ENST00000559108 OR10G7Q8NGN6 311 aa8.01□□□□□ -1.13
TPM1-217ENST00000559108 RAB24Q969Q5 203 aa8.01□□□□□ -1.13
TPM1-217ENST00000559108 C16orf92Q96LL3 132 aa8.01□□□□□ -1.13
TPM1-217ENST00000559108 HYLS1Q96M11 299 aa8.01□□□□□ -1.13
TPM1-217ENST00000559108 B9D2Q9BPU9 175 aa8.01□□□□□ -1.13
TPM1-217ENST00000559108 MRPL32Q9BYC8 188 aaKnown RBP8.01□□□□□ -1.13
TPM1-217ENST00000559108 HRH4Q9H3N8 390 aa8.01□□□□□ -1.13
TPM1-217ENST00000559108 PFDN2Q9UHV9 154 aa8.01□□□□□ -1.13
TPM1-217ENST00000559108 TRBV19A0A075B6N1 114 aa8□□□□□ -1.13
TPM1-217ENST00000559108 ZNF705FA8MVS1 300 aaPredicted RBP8□□□□□ -1.13
TPM1-217ENST00000559108 BOLA2-SMG1P6H3BVE0 249 aa8□□□□□ -1.13
TPM1-217ENST00000559108 ISLRO14498 428 aa8□□□□□ -1.13
TPM1-217ENST00000559108 RHOBP62745 196 aa8□□□□□ -1.13
TPM1-217ENST00000559108 ACOT6Q3I5F7 207 aaPredicted RBP8□□□□□ -1.13
TPM1-217ENST00000559108 TMEM41BQ5BJD5 291 aa8□□□□□ -1.13
TPM1-217ENST00000559108 ACTL10Q5JWF8 245 aa8□□□□□ -1.13
TPM1-217ENST00000559108 EXOC3-AS1Q8N2X6 119 aa8□□□□□ -1.13
TPM1-217ENST00000559108 STOML3Q8TAV4 291 aa8□□□□□ -1.13
TPM1-217ENST00000559108 GNPNAT1Q96EK6 184 aaPredicted RBP8□□□□□ -1.13
TPM1-217ENST00000559108 LINC00052Q96N35 136 aa8□□□□□ -1.13
TPM1-217ENST00000559108 KANTRA0A1W2PQU2 76 aa7.99□□□□□ -1.13
TPM1-217ENST00000559108 M0R3E3 92 aa7.99□□□□□ -1.13
TPM1-217ENST00000559108 STAG3L2P0CL84 134 aa7.99□□□□□ -1.13
TPM1-217ENST00000559108 STAG3L3P0CL85 134 aa7.99□□□□□ -1.13
TPM1-217ENST00000559108 ARL14EPLP0DKL9 152 aa7.99□□□□□ -1.13
TPM1-217ENST00000559108 HIST1H1EP10412 219 aaKnown RBP7.99□□□□□ -1.13
TPM1-217ENST00000559108 CDC34P49427 236 aaPredicted RBP7.99□□□□□ -1.13
TPM1-217ENST00000559108 SERF2P84101 59 aa7.99□□□□□ -1.13
TPM1-217ENST00000559108 LCN15Q6UWW0 184 aa7.99□□□□□ -1.13
TPM1-217ENST00000559108 BLNKQ8WV28 456 aa7.99□□□□□ -1.13
TPM1-217ENST00000559108 RNF141Q8WVD5 230 aa7.99□□□□□ -1.13
TPM1-217ENST00000559108 TMED6Q8WW62 240 aa7.99□□□□□ -1.13
TPM1-217ENST00000559108 PAXXQ9BUH6 204 aa7.99□□□□□ -1.13
TPM1-217ENST00000559108 OR51M1Q9H341 326 aa7.99□□□□□ -1.13
TPM1-217ENST00000559108 SAV1Q9H4B6 383 aaPredicted RBP7.99□□□□□ -1.13
TPM1-217ENST00000559108 TUBA4BQ9H853 241 aa7.99□□□□□ -1.13
TPM1-217ENST00000559108 NBEAL2Q6ZNJ1 2754 aa7.99□□□□□ -1.13
TPM1-217ENST00000559108 LOC102724200A0A096LPH7 203 aaPredicted RBP7.98□□□□□ -1.13
TPM1-217ENST00000559108 A0A0J9YX75 114 aa7.98□□□□□ -1.13
TPM1-217ENST00000559108 H3BMM0 161 aa7.98□□□□□ -1.13
TPM1-217ENST00000559108 OR7C2O60412 319 aa7.98□□□□□ -1.13
TPM1-217ENST00000559108 PFDN1O60925 122 aa7.98□□□□□ -1.13
TPM1-217ENST00000559108 IGKV3-20P01619 116 aa7.98□□□□□ -1.13
TPM1-217ENST00000559108 HLA-DRB4P13762 266 aa7.98□□□□□ -1.13
TPM1-217ENST00000559108 MEOX2P50222 304 aa7.98□□□□□ -1.13
TPM1-217ENST00000559108 UBE2L3P68036 154 aaKnown RBP7.98□□□□□ -1.13
TPM1-217ENST00000559108 PSG3Q16557 428 aa7.98□□□□□ -1.13
TPM1-217ENST00000559108 AMTNQ6UX39 209 aa7.98□□□□□ -1.13
TPM1-217ENST00000559108 BAP18Q8IXM2 172 aa7.98□□□□□ -1.13
TPM1-217ENST00000559108 TM2D3Q9BRN9 247 aa7.98□□□□□ -1.13
TPM1-217ENST00000559108 TMPRSS5Q9H3S3 457 aa7.98□□□□□ -1.13
TPM1-217ENST00000559108 HLA-DRB4X5D2U9 266 aa7.98□□□□□ -1.13
TPM1-217ENST00000559108 A8MTW9 85 aa7.97□□□□□ -1.13
TPM1-217ENST00000559108 NBEAP1P0C6P0 100 aa7.97□□□□□ -1.13
TPM1-217ENST00000559108 SEC11BP0C7V7 166 aa7.97□□□□□ -1.13
TPM1-217ENST00000559108 FGF8P55075 233 aaPredicted RBP7.97□□□□□ -1.13
TPM1-217ENST00000559108 FXYD7P58549 80 aa7.97□□□□□ -1.13
TPM1-217ENST00000559108 SNRPD3P62318 126 aaKnown RBP7.97□□□□□ -1.13
TPM1-217ENST00000559108 KHDC3LQ587J8 217 aa7.97□□□□□ -1.13
TPM1-217ENST00000559108 FAM74A1Q5RGS3 127 aa7.97□□□□□ -1.13
TPM1-217ENST00000559108 FOXI2Q6ZQN5 318 aa7.97□□□□□ -1.13
TPM1-217ENST00000559108 ZNF253O75346 499 aa7.96□□□□□ -1.14
TPM1-217ENST00000559108 TPT1P13693 172 aaKnown RBP7.96□□□□□ -1.14
TPM1-217ENST00000559108 GCHFRP30047 84 aa7.96□□□□□ -1.14
TPM1-217ENST00000559108 S100A7P31151 101 aa7.96□□□□□ -1.14
TPM1-217ENST00000559108 ID1P41134 155 aa7.96□□□□□ -1.14
TPM1-217ENST00000559108 CNN1P51911 297 aaKnown RBP7.96□□□□□ -1.14
TPM1-217ENST00000559108 CMC4P56277 68 aaPredicted RBP7.96□□□□□ -1.14
TPM1-217ENST00000559108 KIR3DS1Q14943 382 aa7.96□□□□□ -1.14
TPM1-217ENST00000559108 ZNF738Q8NE65 137 aa7.96□□□□□ -1.14
TPM1-217ENST00000559108 SUN5Q8TC36 379 aa7.96□□□□□ -1.14
TPM1-217ENST00000559108 RPUSD4Q96CM3 377 aaKnown RBP7.96□□□□□ -1.14
TPM1-217ENST00000559108 SLC50A1Q9BRV3 221 aa7.96□□□□□ -1.14
TPM1-217ENST00000559108 ACTR3CQ9C0K3 210 aaPredicted RBP7.96□□□□□ -1.14
TPM1-217ENST00000559108 SLC35B3Q9H1N7 401 aa7.96□□□□□ -1.14
TPM1-217ENST00000559108 STAB2Q8WWQ8 2551 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms