RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 HMSDA8MTL9 139 aa8.36□□□□□ -1.07
SNX1-204ENST00000559061 IFNA5P01569 189 aa8.36□□□□□ -1.07
SNX1-204ENST00000559061 HLA-DRB4P13762 266 aa8.36□□□□□ -1.07
SNX1-204ENST00000559061 ATF4P18848 351 aaPredicted RBP8.36□□□□□ -1.07
SNX1-204ENST00000559061 CMC4P56277 68 aaPredicted RBP8.36□□□□□ -1.07
SNX1-204ENST00000559061 ZNF345Q14585 488 aa8.36□□□□□ -1.07
SNX1-204ENST00000559061 SSX7Q7RTT5 188 aa8.36□□□□□ -1.07
SNX1-204ENST00000559061 KIR2DL5AQ8N109 375 aa8.36□□□□□ -1.07
SNX1-204ENST00000559061 KCNRGQ8N5I3 272 aa8.36□□□□□ -1.07
SNX1-204ENST00000559061 KIR2DL5BQ8NHK3 375 aa8.36□□□□□ -1.07
SNX1-204ENST00000559061 FXYD5Q96DB9 178 aa8.36□□□□□ -1.07
SNX1-204ENST00000559061 LINC00052Q96N35 136 aa8.36□□□□□ -1.07
SNX1-204ENST00000559061 MFFQ9GZY8 342 aa8.36□□□□□ -1.07
SNX1-204ENST00000559061 HRH4Q9H3N8 390 aa8.36□□□□□ -1.07
SNX1-204ENST00000559061 FUT9Q9Y231 359 aa8.36□□□□□ -1.07
SNX1-204ENST00000559061 U3KQK5 164 aa8.36□□□□□ -1.07
SNX1-204ENST00000559061 HLA-DRB4X5D2U9 266 aa8.36□□□□□ -1.07
SNX1-204ENST00000559061 A0A0J9YX75 114 aa8.35□□□□□ -1.07
SNX1-204ENST00000559061 PRAC2D3DTV9 90 aa8.35□□□□□ -1.07
SNX1-204ENST00000559061 C17orf112F2Z3M2 114 aa8.35□□□□□ -1.07
SNX1-204ENST00000559061 ZNF705DP0CH99 300 aaPredicted RBP8.35□□□□□ -1.07
SNX1-204ENST00000559061 ZNF705BP0CI00 300 aaPredicted RBP8.35□□□□□ -1.07
SNX1-204ENST00000559061 MEOX2P50222 304 aa8.35□□□□□ -1.07
SNX1-204ENST00000559061 SNRPD3P62318 126 aaKnown RBP8.35□□□□□ -1.07
SNX1-204ENST00000559061 ZNF266Q14584 549 aa8.35□□□□□ -1.07
SNX1-204ENST00000559061 DEFB135Q30KP9 77 aa8.35□□□□□ -1.07
SNX1-204ENST00000559061 AMTNQ6UX39 209 aa8.35□□□□□ -1.07
SNX1-204ENST00000559061 BPIFA4PQ86YQ2 179 aa8.35□□□□□ -1.07
SNX1-204ENST00000559061 ZNF709Q8N972 641 aa8.35□□□□□ -1.07
SNX1-204ENST00000559061 INO80EQ8NBZ0 244 aaPredicted RBP8.35□□□□□ -1.07
SNX1-204ENST00000559061 CSNK1G2-AS1Q8NCQ2 148 aa8.35□□□□□ -1.07
SNX1-204ENST00000559061 SCGB1C1Q8TD33 95 aa8.35□□□□□ -1.07
SNX1-204ENST00000559061 C16orf92Q96LL3 132 aa8.35□□□□□ -1.07
SNX1-204ENST00000559061 SPATA25Q9BR10 227 aa8.35□□□□□ -1.07
SNX1-204ENST00000559061 PSMG3Q9BT73 122 aaPredicted RBP8.35□□□□□ -1.07
SNX1-204ENST00000559061 KCNIP2Q9NS61 270 aa8.35□□□□□ -1.07
SNX1-204ENST00000559061 STARD9Q9P2P6 4700 aa8.35□□□□□ -1.07
SNX1-204ENST00000559061 TRBV19A0A075B6N1 114 aa8.34□□□□□ -1.07
SNX1-204ENST00000559061 ZNF705FA8MVS1 300 aaPredicted RBP8.34□□□□□ -1.07
SNX1-204ENST00000559061 ZNF726P1Q15940 193 aa8.34□□□□□ -1.07
SNX1-204ENST00000559061 FOXI2Q6ZQN5 318 aa8.34□□□□□ -1.07
SNX1-204ENST00000559061 RPP25LQ8N5L8 163 aaKnown RBP8.34□□□□□ -1.07
SNX1-204ENST00000559061 MRPL32Q9BYC8 188 aaKnown RBP8.34□□□□□ -1.07
SNX1-204ENST00000559061 EDA2RQ9HAV5 297 aa8.34□□□□□ -1.07
SNX1-204ENST00000559061 HIST1H1EP10412 219 aaKnown RBP8.33□□□□□ -1.08
SNX1-204ENST00000559061 M6PRP20645 277 aa8.33□□□□□ -1.08
SNX1-204ENST00000559061 S100A7P31151 101 aa8.33□□□□□ -1.08
SNX1-204ENST00000559061 ID1P41134 155 aa8.33□□□□□ -1.08
SNX1-204ENST00000559061 APOC4P55056 127 aa8.33□□□□□ -1.08
SNX1-204ENST00000559061 PSG3Q16557 428 aa8.33□□□□□ -1.08
SNX1-204ENST00000559061 LGALSLQ3ZCW2 172 aaPredicted RBP8.33□□□□□ -1.08
SNX1-204ENST00000559061 LCN15Q6UWW0 184 aa8.33□□□□□ -1.08
SNX1-204ENST00000559061 Q6ZWC4 215 aa8.33□□□□□ -1.08
SNX1-204ENST00000559061 STHQ8IWL8 128 aa8.33□□□□□ -1.08
SNX1-204ENST00000559061 RNF183Q96D59 192 aa8.33□□□□□ -1.08
SNX1-204ENST00000559061 PHYHIPLQ96FC7 376 aa8.33□□□□□ -1.08
SNX1-204ENST00000559061 CLUHP3Q96NS8 147 aa8.33□□□□□ -1.08
SNX1-204ENST00000559061 CSTL1Q9H114 145 aa8.33□□□□□ -1.08
SNX1-204ENST00000559061 SLC35B3Q9H1N7 401 aa8.33□□□□□ -1.08
SNX1-204ENST00000559061 RPRMQ9NS64 109 aa8.33□□□□□ -1.08
SNX1-204ENST00000559061 CSMD3Q7Z407 3707 aa8.32□□□□□ -1.08
SNX1-204ENST00000559061 M0R3E3 92 aa8.32□□□□□ -1.08
SNX1-204ENST00000559061 HMGB3O15347 200 aaKnown RBP8.32□□□□□ -1.08
SNX1-204ENST00000559061 ZNF253O75346 499 aa8.32□□□□□ -1.08
SNX1-204ENST00000559061 CA1P00915 261 aaPredicted RBP8.32□□□□□ -1.08
SNX1-204ENST00000559061 IGKV3-20P01619 116 aa8.32□□□□□ -1.08
SNX1-204ENST00000559061 OR10J4P0C629 311 aa8.32□□□□□ -1.08
SNX1-204ENST00000559061 SAMD13Q5VXD3 122 aa8.32□□□□□ -1.08
SNX1-204ENST00000559061 FAM122CQ6P4D5 195 aa8.32□□□□□ -1.08
SNX1-204ENST00000559061 EXOC3-AS1Q8N2X6 119 aa8.32□□□□□ -1.08
SNX1-204ENST00000559061 SLC50A1Q9BRV3 221 aa8.32□□□□□ -1.08
SNX1-204ENST00000559061 CLEC5AQ9NY25 188 aa8.32□□□□□ -1.08
SNX1-204ENST00000559061 UBE2CO00762 179 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 TAAR5O14804 337 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 CRXO43186 299 aaPredicted RBP8.31□□□□□ -1.08
SNX1-204ENST00000559061 BCL2L11O43521 198 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 C1QBP02746 253 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 SPP1P10451 314 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 CNN1P51911 297 aaKnown RBP8.31□□□□□ -1.08
SNX1-204ENST00000559061 FXYD7P58549 80 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 RHOBP62745 196 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 ACOT6Q3I5F7 207 aaPredicted RBP8.31□□□□□ -1.08
SNX1-204ENST00000559061 TMUB2Q71RG4 321 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 S100A7AQ86SG5 101 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 ZNF738Q8NE65 137 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 OR8A1Q8NGG7 326 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 OR10G4Q8NGN3 311 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 OR10G9Q8NGN4 311 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 OR10G7Q8NGN6 311 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 BLNKQ8WV28 456 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 RNF141Q8WVD5 230 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 ARPC5LQ9BPX5 153 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 PAXXQ9BUH6 204 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 OR51M1Q9H341 326 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 TP53TG1Q9Y2A0 90 aa8.31□□□□□ -1.08
SNX1-204ENST00000559061 DYNC2H1Q8NCM8 4307 aaKnown RBP8.31□□□□□ -1.08
SNX1-204ENST00000559061 BORCS7-ASMTA0A0B4J1R7 106 aa8.3□□□□□ -1.08
SNX1-204ENST00000559061 SPRY2O43597 315 aa8.3□□□□□ -1.08
SNX1-204ENST00000559061 STAG3L2P0CL84 134 aa8.3□□□□□ -1.08
SNX1-204ENST00000559061 STAG3L3P0CL85 134 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms