RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 IGKV1OR2-108A0A075B7D4 117 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 PIGBOS1A0A0B4J2F0 54 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 TRIAP1O43715 76 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 PITX3O75364 302 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 IL5P05113 134 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 OR5G3P0C626 314 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 SPART-AS1P0CW21 52 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 GALR1P47211 349 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 ATP5IP56385 69 aaPredicted RBP5.24□□□□□ -1.57
SPG11-213ENST00000558988 TCTAP57738 103 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 POLR2GP62487 172 aaKnown RBP eCLIP5.24□□□□□ -1.57
SPG11-213ENST00000558988 PSG9Q00887 426 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 BAK1Q16611 211 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 C1orf194Q5T5A4 169 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 FAM222AQ5U5X8 452 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 TMEM182Q6ZP80 229 aaPredicted RBP5.24□□□□□ -1.57
SPG11-213ENST00000558988 FOXI2Q6ZQN5 318 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 RNF182Q8N6D2 247 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 BPIFCQ8NFQ6 507 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 NDUFAF3Q9BU61 184 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 RPRMQ9NS64 109 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 PSENENQ9NZ42 101 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 FLVCR2Q9UPI3 526 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 GOLT1BQ9Y3E0 138 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 TMED3Q9Y3Q3 217 aa5.24□□□□□ -1.57
SPG11-213ENST00000558988 CSMD3Q7Z407 3707 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 STARD9Q9P2P6 4700 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 IGLV2-18A0A075B6J9 118 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 A0A0J9YX75 114 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 ZNF98A6NK75 572 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 M0R2Z0 102 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 ISLRO14498 428 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 SOCS3O14543 225 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 CCNKO75909 580 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 SCGB1D1O95968 90 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 IFNA21P01568 189 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 HBE1P02100 147 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 PRM2P04554 102 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 SNRPCP09234 159 aaKnown RBP5.23□□□□□ -1.57
SPG11-213ENST00000558988 HTN1P15515 57 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 ANXA7P20073 488 aaKnown RBP5.23□□□□□ -1.57
SPG11-213ENST00000558988 UBE2MP61081 183 aaKnown RBP5.23□□□□□ -1.57
SPG11-213ENST00000558988 SPINK13Q1W4C9 94 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 CCDC190Q86UF4 302 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 LRTM2Q8N967 370 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 ZNF709Q8N972 641 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 THAP8Q8NA92 274 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 ZNF738Q8NE65 137 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 LRRC20Q8TCA0 184 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 UHRF2Q96PU4 802 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 RNF126Q9BV68 326 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 SRRQ9GZT4 340 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 GSKIPQ9P0R6 139 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 RFNGQ9Y644 331 aa5.23□□□□□ -1.57
SPG11-213ENST00000558988 TRAV12-2A0A075B6T6 113 aa5.22□□□□□ -1.57
SPG11-213ENST00000558988 C9orf170A2RU37 121 aa5.22□□□□□ -1.57
SPG11-213ENST00000558988 TMEM189A5PLL7 270 aa5.22□□□□□ -1.57
SPG11-213ENST00000558988 ZNF705GA8MUZ8 300 aaPredicted RBP5.22□□□□□ -1.57
SPG11-213ENST00000558988 ZNF705FA8MVS1 300 aaPredicted RBP5.22□□□□□ -1.57
SPG11-213ENST00000558988 NDUFB6O95139 128 aa5.22□□□□□ -1.57
SPG11-213ENST00000558988 AMBPP02760 352 aa5.22□□□□□ -1.57
SPG11-213ENST00000558988 METTL15P1P0C7V9 234 aa5.22□□□□□ -1.57
SPG11-213ENST00000558988 LINC00869P0C866 280 aa5.22□□□□□ -1.57
SPG11-213ENST00000558988 SLC25A6P12236 298 aa5.22□□□□□ -1.57
SPG11-213ENST00000558988 MEOX2P50222 304 aa5.22□□□□□ -1.57
SPG11-213ENST00000558988 DAD1P61803 113 aa5.22□□□□□ -1.57
SPG11-213ENST00000558988 RHOBP62745 196 aa5.22□□□□□ -1.57
SPG11-213ENST00000558988 HIST1H1AQ02539 215 aaPredicted RBP5.22□□□□□ -1.57
SPG11-213ENST00000558988 RRN3P1Q2M238 152 aa5.22□□□□□ -1.57
SPG11-213ENST00000558988 IAH1Q2TAA2 248 aaPredicted RBP5.22□□□□□ -1.57
SPG11-213ENST00000558988 ZNF705AQ6ZN79 300 aaPredicted RBP5.22□□□□□ -1.57
SPG11-213ENST00000558988 CYP2G1PQ6ZSU1 146 aa5.22□□□□□ -1.57
SPG11-213ENST00000558988 BAP18Q8IXM2 172 aa5.22□□□□□ -1.57
SPG11-213ENST00000558988 NIPSNAP3BQ9BS92 247 aa5.22□□□□□ -1.57
SPG11-213ENST00000558988 SLC25A39Q9BZJ4 359 aaPredicted RBP5.22□□□□□ -1.57
SPG11-213ENST00000558988 PPP1R14DQ9NXH3 145 aa5.22□□□□□ -1.57
SPG11-213ENST00000558988 HIGD1AQ9Y241 93 aa5.22□□□□□ -1.57
SPG11-213ENST00000558988 YTHDF2Q9Y5A9 579 aaKnown RBP5.22□□□□□ -1.57
SPG11-213ENST00000558988 SMIM9A6NGZ8 99 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 CENPXA8MT69 81 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 FAM25EA8MYX2 175 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 PRSS46E5RG02 174 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 CCSO14618 274 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 HYPMO75409 117 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 GAS8-AS1O95177 125 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 CFDP00746 253 aaPredicted RBP5.21□□□□□ -1.58
SPG11-213ENST00000558988 INSP01308 110 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 OR4E1P0C645 316 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 P0DMU3 169 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 FAM231AP0DMU4 169 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 FAM231CP0DMU5 169 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 DEFB130BP0DP73 79 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 DEFB130AP0DP74 79 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 CNN1P51911 297 aaKnown RBP5.21□□□□□ -1.58
SPG11-213ENST00000558988 SLC38A11Q08AI6 406 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 SAMD13Q5VXD3 122 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 KRTAP5-2Q701N4 177 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 C1orf158Q8N1D5 194 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 POM121L12Q8N7R1 296 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms