RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 SLC17A3O00476 420 aa10.07□□□□□ -0.8
TSPAN3-205ENST00000558745 MPDU1O75352 247 aa10.07□□□□□ -0.8
TSPAN3-205ENST00000558745 EIF3GO75821 320 aaKnown RBP eCLIP10.07□□□□□ -0.8
TSPAN3-205ENST00000558745 SPP1P10451 314 aa10.07□□□□□ -0.8
TSPAN3-205ENST00000558745 CASC10Q5T4H9 136 aa10.07□□□□□ -0.8
TSPAN3-205ENST00000558745 CSNK1G2-AS1Q8NCQ2 148 aa10.07□□□□□ -0.8
TSPAN3-205ENST00000558745 SLC35B3Q9H1N7 401 aa10.07□□□□□ -0.8
TSPAN3-205ENST00000558745 RPRMQ9NS64 109 aa10.07□□□□□ -0.8
TSPAN3-205ENST00000558745 A0A087X0K7 114 aa10.06□□□□□ -0.8
TSPAN3-205ENST00000558745 ZNF705FA8MVS1 300 aaPredicted RBP10.06□□□□□ -0.8
TSPAN3-205ENST00000558745 C3orf84H3BNL1 204 aa10.06□□□□□ -0.8
TSPAN3-205ENST00000558745 GIPP09681 153 aaPredicted RBP10.06□□□□□ -0.8
TSPAN3-205ENST00000558745 IGLC2P0DOY2 106 aa10.06□□□□□ -0.8
TSPAN3-205ENST00000558745 EBLN2Q6P2I7 272 aa10.06□□□□□ -0.8
TSPAN3-205ENST00000558745 MORN3Q6PF18 240 aaPredicted RBP10.06□□□□□ -0.8
TSPAN3-205ENST00000558745 MIR17HGQ75NE6 70 aa10.06□□□□□ -0.8
TSPAN3-205ENST00000558745 S100A7AQ86SG5 101 aa10.06□□□□□ -0.8
TSPAN3-205ENST00000558745 BPIFA4PQ86YQ2 179 aa10.06□□□□□ -0.8
TSPAN3-205ENST00000558745 PFDN5Q99471 154 aa10.06□□□□□ -0.8
TSPAN3-205ENST00000558745 SMLR1H3BR10 107 aa10.05□□□□□ -0.8
TSPAN3-205ENST00000558745 IFNA5P01569 189 aa10.05□□□□□ -0.8
TSPAN3-205ENST00000558745 PYYP10082 97 aa10.05□□□□□ -0.8
TSPAN3-205ENST00000558745 PSG3Q16557 428 aa10.05□□□□□ -0.8
TSPAN3-205ENST00000558745 ZNF709Q8N972 641 aa10.05□□□□□ -0.8
TSPAN3-205ENST00000558745 ZNF738Q8NE65 137 aa10.05□□□□□ -0.8
TSPAN3-205ENST00000558745 SCGB1C1Q8TD33 95 aa10.05□□□□□ -0.8
TSPAN3-205ENST00000558745 GATAD1Q8WUU5 269 aa10.05□□□□□ -0.8
TSPAN3-205ENST00000558745 ZNF586Q9NXT0 402 aa10.05□□□□□ -0.8
TSPAN3-205ENST00000558745 DNAH1Q9P2D7 4330 aa10.04□□□□□ -0.8
TSPAN3-205ENST00000558745 PRAC2D3DTV9 90 aa10.04□□□□□ -0.8
TSPAN3-205ENST00000558745 G3V3Q6 166 aa10.04□□□□□ -0.8
TSPAN3-205ENST00000558745 SAMD13Q5VXD3 122 aa10.04□□□□□ -0.8
TSPAN3-205ENST00000558745 OR2T35Q8NGX2 323 aa10.04□□□□□ -0.8
TSPAN3-205ENST00000558745 SAT2Q96F10 170 aaPredicted RBP10.04□□□□□ -0.8
TSPAN3-205ENST00000558745 FAM167A-AS1Q96KT0 104 aa10.04□□□□□ -0.8
TSPAN3-205ENST00000558745 SLC25A2Q9BXI2 301 aa10.04□□□□□ -0.8
TSPAN3-205ENST00000558745 ZNF331Q9NQX6 463 aaPredicted RBP10.04□□□□□ -0.8
TSPAN3-205ENST00000558745 X6R8D5 127 aa10.04□□□□□ -0.8
TSPAN3-205ENST00000558745 FXYD6-FXYD2A0A087WZ82 144 aa10.03□□□□□ -0.8
TSPAN3-205ENST00000558745 C17orf112F2Z3M2 114 aa10.03□□□□□ -0.8
TSPAN3-205ENST00000558745 CNN1P51911 297 aaKnown RBP10.03□□□□□ -0.8
TSPAN3-205ENST00000558745 PSG9Q00887 426 aa10.03□□□□□ -0.8
TSPAN3-205ENST00000558745 FFAR4Q5NUL3 377 aa10.03□□□□□ -0.8
TSPAN3-205ENST00000558745 AMTNQ6UX39 209 aa10.03□□□□□ -0.8
TSPAN3-205ENST00000558745 IL17DQ8TAD2 202 aa10.03□□□□□ -0.8
TSPAN3-205ENST00000558745 MFFQ9GZY8 342 aa10.03□□□□□ -0.8
TSPAN3-205ENST00000558745 HRH4Q9H3N8 390 aa10.03□□□□□ -0.8
TSPAN3-205ENST00000558745 RNF24Q9Y225 148 aa10.03□□□□□ -0.8
TSPAN3-205ENST00000558745 LYSTQ99698 3801 aa10.02□□□□□ -0.81
TSPAN3-205ENST00000558745 IGHV3OR16-12A0A075B7B8 117 aa10.02□□□□□ -0.81
TSPAN3-205ENST00000558745 RBMY1A1P0DJD3 496 aaKnown RBP10.02□□□□□ -0.81
TSPAN3-205ENST00000558745 RBMY1CP0DJD4 496 aa10.02□□□□□ -0.81
TSPAN3-205ENST00000558745 NUTF2P61970 127 aaKnown RBP10.02□□□□□ -0.81
TSPAN3-205ENST00000558745 HIST1H1AQ02539 215 aaPredicted RBP10.02□□□□□ -0.81
TSPAN3-205ENST00000558745 PMS2P11Q13670 270 aa10.02□□□□□ -0.81
TSPAN3-205ENST00000558745 RBMY1FQ15415 496 aaKnown RBP10.02□□□□□ -0.81
TSPAN3-205ENST00000558745 LCN15Q6UWW0 184 aa10.02□□□□□ -0.81
TSPAN3-205ENST00000558745 BLNKQ8WV28 456 aa10.02□□□□□ -0.81
TSPAN3-205ENST00000558745 RPUSD4Q96CM3 377 aaKnown RBP10.02□□□□□ -0.81
TSPAN3-205ENST00000558745 AQP10Q96PS8 301 aa10.02□□□□□ -0.81
TSPAN3-205ENST00000558745 IGHV4-28A0A0C4DH34 117 aa10.01□□□□□ -0.81
TSPAN3-205ENST00000558745 RNF222A6NCQ9 220 aa10.01□□□□□ -0.81
TSPAN3-205ENST00000558745 ZNF705EA8MWA4 302 aaPredicted RBP10.01□□□□□ -0.81
TSPAN3-205ENST00000558745 M0R2Z0 102 aa10.01□□□□□ -0.81
TSPAN3-205ENST00000558745 NDUFB4O95168 129 aa10.01□□□□□ -0.81
TSPAN3-205ENST00000558745 OR10J4P0C629 311 aa10.01□□□□□ -0.81
TSPAN3-205ENST00000558745 Q8NAQ8 132 aa10.01□□□□□ -0.81
TSPAN3-205ENST00000558745 HSD17B11Q8NBQ5 300 aa10.01□□□□□ -0.81
TSPAN3-205ENST00000558745 OR8A1Q8NGG7 326 aa10.01□□□□□ -0.81
TSPAN3-205ENST00000558745 SLC50A1Q9BRV3 221 aa10.01□□□□□ -0.81
TSPAN3-205ENST00000558745 PARD6GQ9BYG4 376 aaPredicted RBP10.01□□□□□ -0.81
TSPAN3-205ENST00000558745 TMEM14CQ9P0S9 112 aa10.01□□□□□ -0.81
TSPAN3-205ENST00000558745 TNFSF18Q9UNG2 199 aa10.01□□□□□ -0.81
TSPAN3-205ENST00000558745 FUT9Q9Y231 359 aa10.01□□□□□ -0.81
TSPAN3-205ENST00000558745 PLECQ15149 4684 aaKnown RBP10□□□□□ -0.81
TSPAN3-205ENST00000558745 TRBV19A0A075B6N1 114 aa10□□□□□ -0.81
TSPAN3-205ENST00000558745 A8MTW9 85 aa10□□□□□ -0.81
TSPAN3-205ENST00000558745 PRM2P04554 102 aa10□□□□□ -0.81
TSPAN3-205ENST00000558745 HIST1H1EP10412 219 aaKnown RBP10□□□□□ -0.81
TSPAN3-205ENST00000558745 NANOS2P60321 138 aaKnown RBP10□□□□□ -0.81
TSPAN3-205ENST00000558745 RAB2AP61019 212 aa10□□□□□ -0.81
TSPAN3-205ENST00000558745 RHOBP62745 196 aa10□□□□□ -0.81
TSPAN3-205ENST00000558745 SPINK13Q1W4C9 94 aa10□□□□□ -0.81
TSPAN3-205ENST00000558745 TMEM41BQ5BJD5 291 aa10□□□□□ -0.81
TSPAN3-205ENST00000558745 C1orf158Q8N1D5 194 aa10□□□□□ -0.81
TSPAN3-205ENST00000558745 EXOC3-AS1Q8N2X6 119 aa10□□□□□ -0.81
TSPAN3-205ENST00000558745 ZNF503Q96F45 646 aa10□□□□□ -0.81
TSPAN3-205ENST00000558745 CLUHP3Q96NS8 147 aa10□□□□□ -0.81
TSPAN3-205ENST00000558745 OR51M1Q9H341 326 aa10□□□□□ -0.81
TSPAN3-205ENST00000558745 TRAV12-2A0A075B6T6 113 aa9.99□□□□□ -0.81
TSPAN3-205ENST00000558745 M0R3E3 92 aa9.99□□□□□ -0.81
TSPAN3-205ENST00000558745 DUSP14O95147 198 aaKnown RBP9.99□□□□□ -0.81
TSPAN3-205ENST00000558745 CXCL2P19875 107 aa9.99□□□□□ -0.81
TSPAN3-205ENST00000558745 RPL7L1Q6DKI1 246 aaKnown RBP9.99□□□□□ -0.81
TSPAN3-205ENST00000558745 INO80EQ8NBZ0 244 aaPredicted RBP9.99□□□□□ -0.81
TSPAN3-205ENST00000558745 ASB13Q8WXK3 278 aa9.99□□□□□ -0.81
TSPAN3-205ENST00000558745 PAXXQ9BUH6 204 aa9.99□□□□□ -0.81
TSPAN3-205ENST00000558745 C1QTNF4Q9BXJ3 329 aa9.99□□□□□ -0.81
TSPAN3-205ENST00000558745 KCNIP2Q9NS61 270 aa9.99□□□□□ -0.81
TSPAN3-205ENST00000558745 TIMM9Q9Y5J7 89 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms