RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 RPL7P18124 248 aaKnown RBP5.76□□□□□ -1.49
TRAF3-205ENST00000558700 SELENOTP62341 195 aa5.76□□□□□ -1.49
TRAF3-205ENST00000558700 POLR2GP62487 172 aaKnown RBP eCLIP5.76□□□□□ -1.49
TRAF3-205ENST00000558700 DLK1P80370 383 aa5.76□□□□□ -1.49
TRAF3-205ENST00000558700 RRN3P1Q2M238 152 aa5.76□□□□□ -1.49
TRAF3-205ENST00000558700 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.76□□□□□ -1.49
TRAF3-205ENST00000558700 CYP2G1PQ6ZSU1 146 aa5.76□□□□□ -1.49
TRAF3-205ENST00000558700 LINC00336Q6ZUF6 198 aa5.76□□□□□ -1.49
TRAF3-205ENST00000558700 POM121L12Q8N7R1 296 aa5.76□□□□□ -1.49
TRAF3-205ENST00000558700 IGF2BP2-AS1Q96M15 143 aa5.76□□□□□ -1.49
TRAF3-205ENST00000558700 NIPSNAP3BQ9BS92 247 aa5.76□□□□□ -1.49
TRAF3-205ENST00000558700 TMEM208Q9BTX3 173 aa5.76□□□□□ -1.49
TRAF3-205ENST00000558700 RSG1Q9BU20 258 aa5.76□□□□□ -1.49
TRAF3-205ENST00000558700 SCRT1Q9BWW7 348 aa5.76□□□□□ -1.49
TRAF3-205ENST00000558700 PSENENQ9NZ42 101 aa5.76□□□□□ -1.49
TRAF3-205ENST00000558700 DKK2Q9UBU2 259 aa5.76□□□□□ -1.49
TRAF3-205ENST00000558700 RNF24Q9Y225 148 aa5.76□□□□□ -1.49
TRAF3-205ENST00000558700 HIGD1AQ9Y241 93 aa5.76□□□□□ -1.49
TRAF3-205ENST00000558700 YTHDF2Q9Y5A9 579 aaKnown RBP5.76□□□□□ -1.49
TRAF3-205ENST00000558700 FNDC10F2Z333 226 aa5.75□□□□□ -1.49
TRAF3-205ENST00000558700 BOLA2-SMG1P6H3BVE0 249 aa5.75□□□□□ -1.49
TRAF3-205ENST00000558700 OR5G3P0C626 314 aa5.75□□□□□ -1.49
TRAF3-205ENST00000558700 GATA2P23769 480 aaPredicted RBP5.75□□□□□ -1.49
TRAF3-205ENST00000558700 B2MP61769 119 aa5.75□□□□□ -1.49
TRAF3-205ENST00000558700 OXA1LQ15070 435 aa5.75□□□□□ -1.49
TRAF3-205ENST00000558700 CNPY1Q3B7I2 92 aa5.75□□□□□ -1.49
TRAF3-205ENST00000558700 FAM222AQ5U5X8 452 aa5.75□□□□□ -1.49
TRAF3-205ENST00000558700 AMTNQ6UX39 209 aa5.75□□□□□ -1.49
TRAF3-205ENST00000558700 UBE2DNLQ8IWF7 75 aa5.75□□□□□ -1.49
TRAF3-205ENST00000558700 C1orf158Q8N1D5 194 aa5.75□□□□□ -1.49
TRAF3-205ENST00000558700 ZNF738Q8NE65 137 aa5.75□□□□□ -1.49
TRAF3-205ENST00000558700 C20orf173Q96LM9 149 aa5.75□□□□□ -1.49
TRAF3-205ENST00000558700 SHANK2-AS3Q9BTD1 123 aa5.75□□□□□ -1.49
TRAF3-205ENST00000558700 SLC25A39Q9BZJ4 359 aaPredicted RBP5.75□□□□□ -1.49
TRAF3-205ENST00000558700 FLVCR2Q9UPI3 526 aa5.75□□□□□ -1.49
TRAF3-205ENST00000558700 A0A087X0K7 114 aa5.74□□□□□ -1.49
TRAF3-205ENST00000558700 K7EPK0 472 aa5.74□□□□□ -1.49
TRAF3-205ENST00000558700 TSC22D2O75157 780 aa5.74□□□□□ -1.49
TRAF3-205ENST00000558700 HYPMO75409 117 aa5.74□□□□□ -1.49
TRAF3-205ENST00000558700 MBPP02686 304 aaPredicted RBP5.74□□□□□ -1.49
TRAF3-205ENST00000558700 OR4E1P0C645 316 aa5.74□□□□□ -1.49
TRAF3-205ENST00000558700 METTL15P1P0C7V9 234 aa5.74□□□□□ -1.49
TRAF3-205ENST00000558700 CNN1P51911 297 aaKnown RBP5.74□□□□□ -1.49
TRAF3-205ENST00000558700 TAS2R30P59541 319 aa5.74□□□□□ -1.49
TRAF3-205ENST00000558700 PLP1P60201 277 aa5.74□□□□□ -1.49
TRAF3-205ENST00000558700 DAD1P61803 113 aa5.74□□□□□ -1.49
TRAF3-205ENST00000558700 RRAS2P62070 204 aaPredicted RBP5.74□□□□□ -1.49
TRAF3-205ENST00000558700 FGL1Q08830 312 aa5.74□□□□□ -1.49
TRAF3-205ENST00000558700 SPINK13Q1W4C9 94 aa5.74□□□□□ -1.49
TRAF3-205ENST00000558700 IAH1Q2TAA2 248 aaPredicted RBP5.74□□□□□ -1.49
TRAF3-205ENST00000558700 PXDC1Q5TGL8 231 aa5.74□□□□□ -1.49
TRAF3-205ENST00000558700 TMEM182Q6ZP80 229 aaPredicted RBP5.74□□□□□ -1.49
TRAF3-205ENST00000558700 ZNF546Q86UE3 836 aa5.74□□□□□ -1.49
TRAF3-205ENST00000558700 ZBTB8BQ8NAP8 495 aaPredicted RBP5.74□□□□□ -1.49
TRAF3-205ENST00000558700 OR11H7Q8NGC8 314 aa5.74□□□□□ -1.49
TRAF3-205ENST00000558700 OR10P1Q8NGE3 313 aa5.74□□□□□ -1.49
TRAF3-205ENST00000558700 SAT2Q96F10 170 aaPredicted RBP5.74□□□□□ -1.49
TRAF3-205ENST00000558700 SMIM8Q96KF7 97 aa5.74□□□□□ -1.49
TRAF3-205ENST00000558700 NPVFQ9HCQ7 196 aa5.74□□□□□ -1.49
TRAF3-205ENST00000558700 RCL1Q9Y2P8 373 aaKnown RBP5.74□□□□□ -1.49
TRAF3-205ENST00000558700 KMT2AQ03164 3969 aa5.74□□□□□ -1.49
TRAF3-205ENST00000558700 DNAH6Q9C0G6 4158 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 FRAS1Q86XX4 4008 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 LINC00854A0A1B0GVQ3 168 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 PMS2P5A8MQ11 134 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 LYRM9A8MSI8 78 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 M0R2Z0 102 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 IL7P13232 177 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 HTN3P15516 51 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 CXCL2P19875 107 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 ANXA7P20073 488 aaKnown RBP5.73□□□□□ -1.49
TRAF3-205ENST00000558700 TSPOP30536 169 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 BTCP35070 178 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 BLOC1S1P78537 153 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 HIST1H1AQ02539 215 aaPredicted RBP5.73□□□□□ -1.49
TRAF3-205ENST00000558700 SLC38A11Q08AI6 406 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 ZNF846Q147U1 533 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 LCN15Q6UWW0 184 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 TMEM14EPQ6UXP3 125 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 GSG1LQ6UXU4 331 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 BAP18Q8IXM2 172 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 RNF182Q8N6D2 247 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 C15orf53Q8NAA6 179 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 LRRC20Q8TCA0 184 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 MITD1Q8WV92 249 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 C17orf77Q96MU5 243 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 UHRF2Q96PU4 802 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 C20orf85Q9H1P6 137 aa5.73□□□□□ -1.49
TRAF3-205ENST00000558700 VPS13DQ5THJ4 4388 aa5.72□□□□□ -1.49
TRAF3-205ENST00000558700 TRAV8-2A0A0B4J237 113 aa5.72□□□□□ -1.49
TRAF3-205ENST00000558700 L7N2F9 121 aa5.72□□□□□ -1.49
TRAF3-205ENST00000558700 PRYO14603 147 aa5.72□□□□□ -1.49
TRAF3-205ENST00000558700 GOSR2O14653 212 aa5.72□□□□□ -1.49
TRAF3-205ENST00000558700 PAGE4O60829 102 aa5.72□□□□□ -1.49
TRAF3-205ENST00000558700 CCNKO75909 580 aa5.72□□□□□ -1.49
TRAF3-205ENST00000558700 CXCL3P19876 107 aa5.72□□□□□ -1.49
TRAF3-205ENST00000558700 RHOBP62745 196 aa5.72□□□□□ -1.49
TRAF3-205ENST00000558700 ANXA2RQ3ZCQ2 193 aa5.72□□□□□ -1.49
TRAF3-205ENST00000558700 SERTAD4-AS1Q5TG53 156 aa5.72□□□□□ -1.49
TRAF3-205ENST00000558700 TMEM256Q8N2U0 113 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms